RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 LARP6Q9BRS8 491 aaKnown RBP17.87■□□□□ 0.45
NUCKS1-201ENST00000367142 RBM27Q9P2N5 1060 aaKnown RBP17.87■□□□□ 0.45
NUCKS1-201ENST00000367142 SNW1Q13573 536 aaKnown RBP17.87■□□□□ 0.45
NUCKS1-201ENST00000367142 DPH6Q7L8W6 267 aa17.87■□□□□ 0.45
NUCKS1-201ENST00000367142 ALG1Q9BT22 464 aa17.87■□□□□ 0.45
NUCKS1-201ENST00000367142 SPAG1Q07617 926 aa17.87■□□□□ 0.45
NUCKS1-201ENST00000367142 DDB1Q16531 1140 aa17.87■□□□□ 0.45
NUCKS1-201ENST00000367142 FAM212AQ96EL1 285 aa17.87■□□□□ 0.45
NUCKS1-201ENST00000367142 TICAM2Q86XR7 235 aa17.87■□□□□ 0.45
NUCKS1-201ENST00000367142 KIAA1524Q8TCG1 905 aa17.87■□□□□ 0.45
NUCKS1-201ENST00000367142 ARHGEF11O15085 1522 aa17.86■□□□□ 0.45
NUCKS1-201ENST00000367142 GSTA5Q7RTV2 222 aa17.86■□□□□ 0.45
NUCKS1-201ENST00000367142 LMBR1Q8WVP7 490 aa17.86■□□□□ 0.45
NUCKS1-201ENST00000367142 ZC3H12CQ9C0D7 883 aaKnown RBP17.86■□□□□ 0.45
NUCKS1-201ENST00000367142 TFCP2L1Q9NZI6 479 aa17.86■□□□□ 0.45
NUCKS1-201ENST00000367142 EEF2P13639 858 aaKnown RBP17.86■□□□□ 0.45
NUCKS1-201ENST00000367142 ASIC1P78348 528 aa17.86■□□□□ 0.45
NUCKS1-201ENST00000367142 FBXO31Q5XUX0 539 aaPredicted RBP17.86■□□□□ 0.45
NUCKS1-201ENST00000367142 NSRP1Q9H0G5 558 aaKnown RBP17.86■□□□□ 0.45
NUCKS1-201ENST00000367142 MAGI1Q96QZ7 1491 aaPredicted RBP17.86■□□□□ 0.45
NUCKS1-201ENST00000367142 NCOA1Q15788 1441 aa17.86■□□□□ 0.45
NUCKS1-201ENST00000367142 GNAT2P19087 354 aa17.86■□□□□ 0.45
NUCKS1-201ENST00000367142 AFMP43652 599 aa17.86■□□□□ 0.45
NUCKS1-201ENST00000367142 ISM2Q6H9L7 571 aa17.86■□□□□ 0.45
NUCKS1-201ENST00000367142 SSFA2P28290 1259 aa17.85■□□□□ 0.45
NUCKS1-201ENST00000367142 MXRA7P84157 204 aa17.85■□□□□ 0.45
NUCKS1-201ENST00000367142 TPTE2Q6XPS3 522 aa17.85■□□□□ 0.45
NUCKS1-201ENST00000367142 USP25Q9UHP3 1055 aa17.85■□□□□ 0.45
NUCKS1-201ENST00000367142 PSMA7O14818 248 aa17.85■□□□□ 0.45
NUCKS1-201ENST00000367142 GJC1P36383 396 aa17.85■□□□□ 0.45
NUCKS1-201ENST00000367142 JARID2Q92833 1246 aaPredicted RBP17.85■□□□□ 0.45
NUCKS1-201ENST00000367142 CEP83Q9Y592 693 aa17.85■□□□□ 0.45
NUCKS1-201ENST00000367142 NPHP3Q7Z494 1330 aa17.85■□□□□ 0.45
NUCKS1-201ENST00000367142 FBF1Q8TES7 1133 aa17.85■□□□□ 0.45
NUCKS1-201ENST00000367142 RTCBQ9Y3I0 505 aaKnown RBP17.85■□□□□ 0.45
NUCKS1-201ENST00000367142 ACEP12821 1306 aa17.85■□□□□ 0.45
NUCKS1-201ENST00000367142 SNX16P57768 344 aa17.85■□□□□ 0.45
NUCKS1-201ENST00000367142 KCNG4Q8TDN1 519 aa17.84■□□□□ 0.45
NUCKS1-201ENST00000367142 CFAP57Q96MR6 1250 aa17.84■□□□□ 0.45
NUCKS1-201ENST00000367142 STMN4Q9H169 189 aaPredicted RBP17.84■□□□□ 0.45
NUCKS1-201ENST00000367142 KIF14Q15058 1648 aa17.84■□□□□ 0.45
NUCKS1-201ENST00000367142 KRT79Q5XKE5 535 aa17.84■□□□□ 0.45
NUCKS1-201ENST00000367142 CCDC63Q8NA47 563 aa17.84■□□□□ 0.45
NUCKS1-201ENST00000367142 ANKRD2Q9GZV1 360 aa17.84■□□□□ 0.45
NUCKS1-201ENST00000367142 SERPINA10Q9UK55 444 aa17.84■□□□□ 0.45
NUCKS1-201ENST00000367142 IQSEC3Q9UPP2 1182 aaPredicted RBP17.84■□□□□ 0.45
NUCKS1-201ENST00000367142 TOPBP1Q92547 1522 aa17.84■□□□□ 0.45
NUCKS1-201ENST00000367142 DHX29Q7Z478 1369 aaKnown RBP17.84■□□□□ 0.45
NUCKS1-201ENST00000367142 IL15P40933 162 aaPredicted RBP17.84■□□□□ 0.45
NUCKS1-201ENST00000367142 BMS1Q14692 1282 aaKnown RBP17.84■□□□□ 0.45
NUCKS1-201ENST00000367142 SH2D4AQ9H788 454 aa17.84■□□□□ 0.45
NUCKS1-201ENST00000367142 GTPBP4Q9BZE4 634 aaKnown RBP17.84■□□□□ 0.45
NUCKS1-201ENST00000367142 MBIPQ9NS73 344 aa17.84■□□□□ 0.45
NUCKS1-201ENST00000367142 POLR3GO15318 223 aaPredicted RBP17.83■□□□□ 0.45
NUCKS1-201ENST00000367142 C16orf45Q96MC5 204 aaPredicted RBP17.83■□□□□ 0.45
NUCKS1-201ENST00000367142 NESP48681 1621 aa17.83■□□□□ 0.45
NUCKS1-201ENST00000367142 XAGE3Q8WTP9 111 aa17.83■□□□□ 0.45
NUCKS1-201ENST00000367142 BRF1Q92994 677 aa17.83■□□□□ 0.45
NUCKS1-201ENST00000367142 CCDC14Q49A88 953 aa17.83■□□□□ 0.44
NUCKS1-201ENST00000367142 CCDC50Q8IVM0 306 aa17.83■□□□□ 0.44
NUCKS1-201ENST00000367142 ZNF710Q8N1W2 664 aa17.83■□□□□ 0.44
NUCKS1-201ENST00000367142 ODF2LQ9ULJ1 636 aa17.83■□□□□ 0.44
NUCKS1-201ENST00000367142 CALML3P27482 149 aa17.83■□□□□ 0.44
NUCKS1-201ENST00000367142 ZNF165P49910 485 aa17.83■□□□□ 0.44
NUCKS1-201ENST00000367142 UBE2HP62256 183 aa17.83■□□□□ 0.44
NUCKS1-201ENST00000367142 TTC22Q5TAA0 569 aa17.83■□□□□ 0.44
NUCKS1-201ENST00000367142 NAP1L4Q99733 375 aaKnown RBP17.83■□□□□ 0.44
NUCKS1-201ENST00000367142 RHPN1Q8TCX5 695 aa17.82■□□□□ 0.44
NUCKS1-201ENST00000367142 RBM17Q96I25 401 aaKnown RBP17.82■□□□□ 0.44
NUCKS1-201ENST00000367142 TRIM27P14373 513 aa17.82■□□□□ 0.44
NUCKS1-201ENST00000367142 GNG11P61952 73 aa17.82■□□□□ 0.44
NUCKS1-201ENST00000367142 PAIP2Q9BPZ3 127 aaKnown RBP17.82■□□□□ 0.44
NUCKS1-201ENST00000367142 MCMDC2Q4G0Z9 681 aa17.82■□□□□ 0.44
NUCKS1-201ENST00000367142 DENND4BO75064 1496 aaPredicted RBP17.82■□□□□ 0.44
NUCKS1-201ENST00000367142 DZIP3Q86Y13 1208 aaKnown RBP17.82■□□□□ 0.44
NUCKS1-201ENST00000367142 KIAA0586Q9BVV6 1533 aa17.82■□□□□ 0.44
NUCKS1-201ENST00000367142 HS2ST1Q7LGA3 356 aa17.81■□□□□ 0.44
NUCKS1-201ENST00000367142 ANKRD36BQ8N2N9 1353 aa17.81■□□□□ 0.44
NUCKS1-201ENST00000367142 TMEM110-MUSTN1A8MSY1 372 aa17.81■□□□□ 0.44
NUCKS1-201ENST00000367142 SH3BP5O60239 455 aa17.81■□□□□ 0.44
NUCKS1-201ENST00000367142 CHPF2Q9P2E5 772 aa17.81■□□□□ 0.44
NUCKS1-201ENST00000367142 UBASH3AP57075 661 aa17.81■□□□□ 0.44
NUCKS1-201ENST00000367142 SLC9C2Q5TAH2 1124 aa17.81■□□□□ 0.44
NUCKS1-201ENST00000367142 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.81■□□□□ 0.44
NUCKS1-201ENST00000367142 TIAM1Q13009 1591 aa17.81■□□□□ 0.44
NUCKS1-201ENST00000367142 ANAPC4Q9UJX5 808 aa17.81■□□□□ 0.44
NUCKS1-201ENST00000367142 CDK13Q14004 1512 aaKnown RBP17.81■□□□□ 0.44
NUCKS1-201ENST00000367142 TNRQ92752 1358 aa17.81■□□□□ 0.44
NUCKS1-201ENST00000367142 BACH1O14867 736 aa17.81■□□□□ 0.44
NUCKS1-201ENST00000367142 ALDH1L1O75891 902 aa17.81■□□□□ 0.44
NUCKS1-201ENST00000367142 NOD1Q9Y239 953 aa17.81■□□□□ 0.44
NUCKS1-201ENST00000367142 PPFIA3O75145 1194 aa17.8■□□□□ 0.44
NUCKS1-201ENST00000367142 GAS8O95995 478 aa17.8■□□□□ 0.44
NUCKS1-201ENST00000367142 UVSSAQ2YD98 709 aa17.8■□□□□ 0.44
NUCKS1-201ENST00000367142 MAP7D1Q3KQU3 841 aa17.8■□□□□ 0.44
NUCKS1-201ENST00000367142 TXNDC16Q9P2K2 825 aa17.8■□□□□ 0.44
NUCKS1-201ENST00000367142 TACC1O75410 805 aa17.8■□□□□ 0.44
NUCKS1-201ENST00000367142 ZWINTO95229 277 aa17.8■□□□□ 0.44
NUCKS1-201ENST00000367142 TBC1D9Q6ZT07 1266 aa17.8■□□□□ 0.44
NUCKS1-201ENST00000367142 BICDL2A1A5D9 508 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms