RNA–Protein interactions for RNA: ENST00000360688.3

GDPD3-201, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 1 (best)

Gene GDPD3, Length 1,306 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-201ENST00000360688 TSKSQ9UJT2 592 aa19.5■□□□□ 0.71
GDPD3-201ENST00000360688 CASP8AP2Q9UKL3 1982 aa19.49■□□□□ 0.71
GDPD3-201ENST00000360688 RPS12P25398 132 aaKnown RBP19.49■□□□□ 0.71
GDPD3-201ENST00000360688 GNAI1P63096 354 aa19.49■□□□□ 0.71
GDPD3-201ENST00000360688 TBC1D10BQ4KMP7 808 aaPredicted RBP19.49■□□□□ 0.71
GDPD3-201ENST00000360688 DLK2Q6UY11 383 aa19.49■□□□□ 0.71
GDPD3-201ENST00000360688 MYD88Q99836 296 aa19.49■□□□□ 0.71
GDPD3-201ENST00000360688 SEC31BQ9NQW1 1179 aa19.49■□□□□ 0.71
GDPD3-201ENST00000360688 PODXL2Q9NZ53 605 aa19.48■□□□□ 0.71
GDPD3-201ENST00000360688 BRPF1P55201 1214 aaPredicted RBP19.47■□□□□ 0.71
GDPD3-201ENST00000360688 CALD1Q05682 793 aaKnown RBP19.47■□□□□ 0.71
GDPD3-201ENST00000360688 ZC3H12CQ9C0D7 883 aaKnown RBP19.47■□□□□ 0.71
GDPD3-201ENST00000360688 CA12O43570 354 aa19.46■□□□□ 0.71
GDPD3-201ENST00000360688 PCCAP05165 728 aaPredicted RBP19.46■□□□□ 0.71
GDPD3-201ENST00000360688 HSP90B1P14625 803 aaKnown RBP19.46■□□□□ 0.71
GDPD3-201ENST00000360688 RBM26Q5T8P6 1007 aaKnown RBP19.46■□□□□ 0.71
GDPD3-201ENST00000360688 KRT26Q7Z3Y9 468 aa19.46■□□□□ 0.71
GDPD3-201ENST00000360688 C8orf58Q8NAV2 365 aa19.46■□□□□ 0.71
GDPD3-201ENST00000360688 CCDC191Q8NCU4 936 aa19.46■□□□□ 0.71
GDPD3-201ENST00000360688 PSME4Q14997 1843 aa19.46■□□□□ 0.71
GDPD3-201ENST00000360688 UFL1O94874 794 aa19.45■□□□□ 0.7
GDPD3-201ENST00000360688 VIL1P09327 827 aaKnown RBP19.45■□□□□ 0.7
GDPD3-201ENST00000360688 HUNKP57058 714 aa19.45■□□□□ 0.7
GDPD3-201ENST00000360688 PDE8AO60658 829 aa19.44■□□□□ 0.7
GDPD3-201ENST00000360688 NOGQ13253 232 aa19.44■□□□□ 0.7
GDPD3-201ENST00000360688 CCDC152Q4G0S7 254 aa19.44■□□□□ 0.7
GDPD3-201ENST00000360688 JARID2Q92833 1246 aaPredicted RBP19.44■□□□□ 0.7
GDPD3-201ENST00000360688 DCPSQ96C86 337 aaKnown RBP19.44■□□□□ 0.7
GDPD3-201ENST00000360688 ZIC5Q96T25 663 aa19.44■□□□□ 0.7
GDPD3-201ENST00000360688 CWC25Q9NXE8 425 aaPredicted RBP19.44■□□□□ 0.7
GDPD3-201ENST00000360688 ANKIB1Q9P2G1 1089 aa19.44■□□□□ 0.7
GDPD3-201ENST00000360688 METTL22Q9BUU2 404 aaPredicted RBP19.43■□□□□ 0.7
GDPD3-201ENST00000360688 GGA1Q9UJY5 639 aa19.43■□□□□ 0.7
GDPD3-201ENST00000360688 MYH3P11055 1940 aa19.43■□□□□ 0.7
GDPD3-201ENST00000360688 ADM5C9JUS6 153 aa19.42■□□□□ 0.7
GDPD3-201ENST00000360688 KIF4BQ2VIQ3 1234 aa19.42■□□□□ 0.7
GDPD3-201ENST00000360688 CCDC30Q5VVM6 783 aa19.42■□□□□ 0.7
GDPD3-201ENST00000360688 CCDC85AQ96PX6 553 aaPredicted RBP19.42■□□□□ 0.7
GDPD3-201ENST00000360688 GBA2Q9HCG7 927 aaPredicted RBP19.42■□□□□ 0.7
GDPD3-201ENST00000360688 G3V3G9 751 aa19.41■□□□□ 0.7
GDPD3-201ENST00000360688 DDX58O95786 925 aaKnown RBP19.41■□□□□ 0.7
GDPD3-201ENST00000360688 DCAF8Q5TAQ9 597 aa19.41■□□□□ 0.7
GDPD3-201ENST00000360688 RGMBQ6NW40 437 aa19.41■□□□□ 0.7
GDPD3-201ENST00000360688 TSPYL6Q8N831 410 aa19.41■□□□□ 0.7
GDPD3-201ENST00000360688 C2orf69Q8N8R5 385 aa19.41■□□□□ 0.7
GDPD3-201ENST00000360688 SPEF2Q9C093 1822 aa19.4■□□□□ 0.7
GDPD3-201ENST00000360688 CHMP4AQ9BY43 222 aa19.4■□□□□ 0.7
GDPD3-201ENST00000360688 GGA3Q9NZ52 723 aa19.4■□□□□ 0.7
GDPD3-201ENST00000360688 MAP3K2Q9Y2U5 619 aa19.4■□□□□ 0.7
GDPD3-201ENST00000360688 ASTN2O75129 1339 aaPredicted RBP19.4■□□□□ 0.7
GDPD3-201ENST00000360688 ZNF609O15014 1411 aa19.4■□□□□ 0.7
GDPD3-201ENST00000360688 CCDC85CA6NKD9 419 aa19.39■□□□□ 0.69
GDPD3-201ENST00000360688 FAM155AB1AL88 458 aaPredicted RBP19.39■□□□□ 0.69
GDPD3-201ENST00000360688 ZNF280AP59817 542 aaPredicted RBP19.39■□□□□ 0.69
GDPD3-201ENST00000360688 ANKRD18AQ8IVF6 992 aa19.39■□□□□ 0.69
GDPD3-201ENST00000360688 AGBL3Q8NEM8 1001 aa19.39■□□□□ 0.69
GDPD3-201ENST00000360688 XDHP47989 1333 aa19.39■□□□□ 0.69
GDPD3-201ENST00000360688 IGKV5-2P06315 115 aa19.38■□□□□ 0.69
GDPD3-201ENST00000360688 ZEB1P37275 1124 aaPredicted RBP19.38■□□□□ 0.69
GDPD3-201ENST00000360688 RSBN1LQ6PCB5 846 aaPredicted RBP19.38■□□□□ 0.69
GDPD3-201ENST00000360688 KSR2Q6VAB6 950 aa19.38■□□□□ 0.69
GDPD3-201ENST00000360688 SULF1Q8IWU6 871 aa19.38■□□□□ 0.69
GDPD3-201ENST00000360688 MCOLN1Q9GZU1 580 aa19.38■□□□□ 0.69
GDPD3-201ENST00000360688 AKAP11Q9UKA4 1901 aa19.38■□□□□ 0.69
GDPD3-201ENST00000360688 PI4KAP2A4QPH2 592 aa19.37■□□□□ 0.69
GDPD3-201ENST00000360688 ATP2B4P23634 1241 aa19.37■□□□□ 0.69
GDPD3-201ENST00000360688 FAM161AQ3B820 660 aa19.37■□□□□ 0.69
GDPD3-201ENST00000360688 PI4KAP1Q8N8J0 262 aa19.37■□□□□ 0.69
GDPD3-201ENST00000360688 GMLQ99445 158 aa19.37■□□□□ 0.69
GDPD3-201ENST00000360688 ZNF157P51786 506 aaPredicted RBP19.36■□□□□ 0.69
GDPD3-201ENST00000360688 CTSWP56202 376 aa19.36■□□□□ 0.69
GDPD3-201ENST00000360688 SCARF1Q14162 830 aa19.36■□□□□ 0.69
GDPD3-201ENST00000360688 TTLL11Q8NHH1 800 aa19.36■□□□□ 0.69
GDPD3-201ENST00000360688 TSR2Q969E8 191 aaKnown RBP19.36■□□□□ 0.69
GDPD3-201ENST00000360688 CCDC102AQ96A19 550 aa19.36■□□□□ 0.69
GDPD3-201ENST00000360688 CDCA5Q96FF9 252 aa19.36■□□□□ 0.69
GDPD3-201ENST00000360688 WTIPA6NIX2 430 aaPredicted RBP19.35■□□□□ 0.69
GDPD3-201ENST00000360688 KIF23Q02241 960 aaPredicted RBP19.35■□□□□ 0.69
GDPD3-201ENST00000360688 ANGEL2Q5VTE6 544 aaKnown RBP19.35■□□□□ 0.69
GDPD3-201ENST00000360688 PODNQ7Z5L7 613 aa19.35■□□□□ 0.69
GDPD3-201ENST00000360688 CDC5LQ99459 802 aaKnown RBP19.35■□□□□ 0.69
GDPD3-201ENST00000360688 ZNF646O15015 1829 aaPredicted RBP19.35■□□□□ 0.69
GDPD3-201ENST00000360688 USP17L8P0C7I0 530 aa19.34■□□□□ 0.69
GDPD3-201ENST00000360688 RGS19P49795 217 aa19.34■□□□□ 0.69
GDPD3-201ENST00000360688 GREM2Q9H772 168 aa19.34■□□□□ 0.69
GDPD3-201ENST00000360688 USP17L3A6NCW0 530 aa19.33■□□□□ 0.69
GDPD3-201ENST00000360688 USP17L4A6NCW7 530 aa19.33■□□□□ 0.69
GDPD3-201ENST00000360688 SLC10A3P09131 477 aa19.33■□□□□ 0.69
GDPD3-201ENST00000360688 NEXNQ0ZGT2 675 aa19.33■□□□□ 0.69
GDPD3-201ENST00000360688 DGKZQ13574 1117 aa19.33■□□□□ 0.69
GDPD3-201ENST00000360688 CWF19L2Q2TBE0 894 aaKnown RBP19.33■□□□□ 0.69
GDPD3-201ENST00000360688 USP17L1Q7RTZ2 530 aa19.33■□□□□ 0.69
GDPD3-201ENST00000360688 STK31Q9BXU1 1019 aa19.33■□□□□ 0.69
GDPD3-201ENST00000360688 MYOZ2Q9NPC6 264 aa19.33■□□□□ 0.69
GDPD3-201ENST00000360688 BSDC1Q9NW68 430 aaPredicted RBP19.33■□□□□ 0.69
GDPD3-201ENST00000360688 MINPP1Q9UNW1 487 aa19.33■□□□□ 0.69
GDPD3-201ENST00000360688 MED23Q9ULK4 1368 aa19.33■□□□□ 0.68
GDPD3-201ENST00000360688 NEURL1BA8MQ27 555 aa19.32■□□□□ 0.68
GDPD3-201ENST00000360688 CCDC184Q52MB2 194 aa19.32■□□□□ 0.68
GDPD3-201ENST00000360688 G2E3Q7L622 706 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms