RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 ZBTB1Q9Y2K1 713 aa17.86■□□□□ 0.45
GABPB1-202ENST00000359031 ZNF831Q5JPB2 1677 aa17.85■□□□□ 0.45
GABPB1-202ENST00000359031 NLRP10Q86W26 655 aa17.85■□□□□ 0.45
GABPB1-202ENST00000359031 SYTL4Q96C24 671 aaPredicted RBP17.85■□□□□ 0.45
GABPB1-202ENST00000359031 EDC3Q96F86 508 aaKnown RBP17.85■□□□□ 0.45
GABPB1-202ENST00000359031 SH2B1Q9NRF2 756 aaPredicted RBP17.85■□□□□ 0.45
GABPB1-202ENST00000359031 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.85■□□□□ 0.45
GABPB1-202ENST00000359031 TAF5LO75529 589 aa17.84■□□□□ 0.45
GABPB1-202ENST00000359031 PRIM1P49642 420 aaKnown RBP17.84■□□□□ 0.45
GABPB1-202ENST00000359031 ADCK5Q3MIX3 580 aa17.84■□□□□ 0.45
GABPB1-202ENST00000359031 TSGA10IPQ3SY00 556 aa17.84■□□□□ 0.45
GABPB1-202ENST00000359031 USPL1Q5W0Q7 1092 aa17.84■□□□□ 0.45
GABPB1-202ENST00000359031 ZNF589Q86UQ0 364 aaPredicted RBP17.84■□□□□ 0.45
GABPB1-202ENST00000359031 ZNF594Q96JF6 807 aaPredicted RBP17.84■□□□□ 0.45
GABPB1-202ENST00000359031 NEUROD6Q96NK8 337 aa17.84■□□□□ 0.45
GABPB1-202ENST00000359031 CEP126Q9P2H0 1117 aa17.84■□□□□ 0.45
GABPB1-202ENST00000359031 AKAP2Q9Y2D5 859 aa17.84■□□□□ 0.45
GABPB1-202ENST00000359031 A0A1B0GUL7 405 aa17.83■□□□□ 0.45
GABPB1-202ENST00000359031 HLFQ16534 295 aa17.83■□□□□ 0.45
GABPB1-202ENST00000359031 FAM89AQ96GI7 184 aa17.83■□□□□ 0.45
GABPB1-202ENST00000359031 PAG1Q9NWQ8 432 aa17.83■□□□□ 0.45
GABPB1-202ENST00000359031 KAT6BQ8WYB5 2073 aa17.83■□□□□ 0.45
GABPB1-202ENST00000359031 WDR33Q9C0J8 1336 aaKnown RBP17.83■□□□□ 0.45
GABPB1-202ENST00000359031 ABCC12Q96J65 1359 aa17.83■□□□□ 0.45
GABPB1-202ENST00000359031 LAMB2P55268 1798 aa17.83■□□□□ 0.45
GABPB1-202ENST00000359031 RIC1Q4ADV7 1423 aa17.83■□□□□ 0.45
GABPB1-202ENST00000359031 KCNQ2O43526 872 aa17.83■□□□□ 0.44
GABPB1-202ENST00000359031 IFIT5Q13325 482 aaKnown RBP17.83■□□□□ 0.44
GABPB1-202ENST00000359031 KRT32Q14532 448 aa17.83■□□□□ 0.44
GABPB1-202ENST00000359031 MCMDC2Q4G0Z9 681 aa17.83■□□□□ 0.44
GABPB1-202ENST00000359031 TAF7LQ5H9L4 462 aa17.83■□□□□ 0.44
GABPB1-202ENST00000359031 DDX46Q7L014 1031 aaKnown RBP17.83■□□□□ 0.44
GABPB1-202ENST00000359031 ALDH8A1Q9H2A2 487 aaPredicted RBP17.83■□□□□ 0.44
GABPB1-202ENST00000359031 LMBRD1Q9NUN5 540 aa17.83■□□□□ 0.44
GABPB1-202ENST00000359031 DDX49Q9Y6V7 483 aaKnown RBP17.83■□□□□ 0.44
GABPB1-202ENST00000359031 U3KPZ7 1027 aaPredicted RBP17.83■□□□□ 0.44
GABPB1-202ENST00000359031 COL5A3P25940 1745 aaPredicted RBP17.82■□□□□ 0.44
GABPB1-202ENST00000359031 HELLSQ9NRZ9 838 aa17.82■□□□□ 0.44
GABPB1-202ENST00000359031 ARAP2Q8WZ64 1704 aa17.82■□□□□ 0.44
GABPB1-202ENST00000359031 IFIT1P09914 478 aaKnown RBP17.81■□□□□ 0.44
GABPB1-202ENST00000359031 TIMM10P62072 90 aa17.81■□□□□ 0.44
GABPB1-202ENST00000359031 ANKRD1Q15327 319 aa17.81■□□□□ 0.44
GABPB1-202ENST00000359031 BLOC1S2Q6QNY1 142 aa17.81■□□□□ 0.44
GABPB1-202ENST00000359031 DZIP3Q86Y13 1208 aaKnown RBP17.81■□□□□ 0.44
GABPB1-202ENST00000359031 ARXQ96QS3 562 aa17.81■□□□□ 0.44
GABPB1-202ENST00000359031 PUS3Q9BZE2 481 aaKnown RBP17.81■□□□□ 0.44
GABPB1-202ENST00000359031 BCORQ6W2J9 1755 aa17.81■□□□□ 0.44
GABPB1-202ENST00000359031 MYH7P12883 1935 aa17.81■□□□□ 0.44
GABPB1-202ENST00000359031 CPA1P15085 419 aa17.8■□□□□ 0.44
GABPB1-202ENST00000359031 MRE11P49959 708 aa17.8■□□□□ 0.44
GABPB1-202ENST00000359031 CTSWP56202 376 aa17.8■□□□□ 0.44
GABPB1-202ENST00000359031 GOLIM4O00461 696 aa17.8■□□□□ 0.44
GABPB1-202ENST00000359031 GPTP24298 496 aa17.8■□□□□ 0.44
GABPB1-202ENST00000359031 LRRFIP1Q32MZ4 808 aaKnown RBP17.8■□□□□ 0.44
GABPB1-202ENST00000359031 AK7Q96M32 723 aa17.8■□□□□ 0.44
GABPB1-202ENST00000359031 SMC3Q9UQE7 1217 aa17.8■□□□□ 0.44
GABPB1-202ENST00000359031 NDUFB9Q9Y6M9 179 aa17.8■□□□□ 0.44
GABPB1-202ENST00000359031 RPS6KB1P23443 525 aa17.79■□□□□ 0.44
GABPB1-202ENST00000359031 CCDC158Q5M9N0 1113 aa17.79■□□□□ 0.44
GABPB1-202ENST00000359031 ZNF34Q8IZ26 560 aa17.79■□□□□ 0.44
GABPB1-202ENST00000359031 MARCH10Q8NA82 808 aaPredicted RBP17.79■□□□□ 0.44
GABPB1-202ENST00000359031 CCDC87Q9NVE4 849 aa17.79■□□□□ 0.44
GABPB1-202ENST00000359031 LAMA4Q16363 1823 aa17.78■□□□□ 0.44
GABPB1-202ENST00000359031 ANKRD18BA2A2Z9 1011 aa17.78■□□□□ 0.44
GABPB1-202ENST00000359031 IRS4O14654 1257 aaPredicted RBP17.78■□□□□ 0.44
GABPB1-202ENST00000359031 PDE8AO60658 829 aa17.78■□□□□ 0.44
GABPB1-202ENST00000359031 LARGE1O95461 756 aa17.78■□□□□ 0.44
GABPB1-202ENST00000359031 EIF5P55010 431 aaKnown RBP17.78■□□□□ 0.44
GABPB1-202ENST00000359031 ZMYM1Q5SVZ6 1142 aa17.78■□□□□ 0.44
GABPB1-202ENST00000359031 TTLL11Q8NHH1 800 aa17.78■□□□□ 0.44
GABPB1-202ENST00000359031 BRPF3Q9ULD4 1205 aa17.78■□□□□ 0.44
GABPB1-202ENST00000359031 DDX60Q8IY21 1712 aaKnown RBP17.78■□□□□ 0.44
GABPB1-202ENST00000359031 TTC39AQ5SRH9 613 aa17.77■□□□□ 0.44
GABPB1-202ENST00000359031 XAGE2Q96GT9 111 aa17.77■□□□□ 0.44
GABPB1-202ENST00000359031 DSCC1Q9BVC3 393 aa17.77■□□□□ 0.44
GABPB1-202ENST00000359031 TRMT112Q9UI30 125 aaKnown RBP17.77■□□□□ 0.44
GABPB1-202ENST00000359031 UBN2Q6ZU65 1347 aa17.77■□□□□ 0.43
GABPB1-202ENST00000359031 PRPF40AO75400 957 aaKnown RBP17.76■□□□□ 0.43
GABPB1-202ENST00000359031 MBD3O95983 291 aa17.76■□□□□ 0.43
GABPB1-202ENST00000359031 ITGA6P23229 1130 aa17.76■□□□□ 0.43
GABPB1-202ENST00000359031 GORABQ5T7V8 394 aa17.76■□□□□ 0.43
GABPB1-202ENST00000359031 INTS5Q6P9B9 1019 aaKnown RBP17.76■□□□□ 0.43
GABPB1-202ENST00000359031 SMARCC1Q92922 1105 aaPredicted RBP17.76■□□□□ 0.43
GABPB1-202ENST00000359031 GREM2Q9H772 168 aa17.76■□□□□ 0.43
GABPB1-202ENST00000359031 RIPOR2Q9Y4F9 1068 aa17.76■□□□□ 0.43
GABPB1-202ENST00000359031 LOC102724428A0A0B4J2F2 783 aa17.76■□□□□ 0.43
GABPB1-202ENST00000359031 RNF113AO15541 343 aaKnown RBP17.76■□□□□ 0.43
GABPB1-202ENST00000359031 XRCC6P12956 609 aaKnown RBP eCLIP17.76■□□□□ 0.43
GABPB1-202ENST00000359031 PDIA4P13667 645 aaKnown RBP17.76■□□□□ 0.43
GABPB1-202ENST00000359031 SIK1P57059 783 aa17.76■□□□□ 0.43
GABPB1-202ENST00000359031 METTL24Q5JXM2 366 aa17.76■□□□□ 0.43
GABPB1-202ENST00000359031 CCDC129Q6ZRS4 1044 aa17.76■□□□□ 0.43
GABPB1-202ENST00000359031 CCDC83Q8IWF9 413 aa17.76■□□□□ 0.43
GABPB1-202ENST00000359031 SEC62Q99442 399 aaKnown RBP17.76■□□□□ 0.43
GABPB1-202ENST00000359031 GRPEL1Q9HAV7 217 aa17.76■□□□□ 0.43
GABPB1-202ENST00000359031 TBC1D2BQ9UPU7 963 aa17.76■□□□□ 0.43
GABPB1-202ENST00000359031 MYH14Q7Z406 1995 aaKnown RBP17.75■□□□□ 0.43
GABPB1-202ENST00000359031 STX6O43752 255 aa17.75■□□□□ 0.43
GABPB1-202ENST00000359031 ZFYP08048 801 aaPredicted RBP17.75■□□□□ 0.43
GABPB1-202ENST00000359031 ZSCAN22P10073 491 aaPredicted RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms