RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 ZIC5Q96T25 663 aa11.21□□□□□ -0.61
COL4A3BP-202ENST00000357457 MCOLN1Q9GZU1 580 aa11.21□□□□□ -0.61
COL4A3BP-202ENST00000357457 CHPF2Q9P2E5 772 aa11.21□□□□□ -0.61
COL4A3BP-202ENST00000357457 POLLQ9UGP5 575 aa11.21□□□□□ -0.61
COL4A3BP-202ENST00000357457 NSFL1CQ9UNZ2 370 aaKnown RBP11.21□□□□□ -0.61
COL4A3BP-202ENST00000357457 TRIM35Q9UPQ4 493 aa11.21□□□□□ -0.61
COL4A3BP-202ENST00000357457 PDE4DIPQ5VU43 2346 aa11.21□□□□□ -0.62
COL4A3BP-202ENST00000357457 FAM155AB1AL88 458 aaPredicted RBP11.2□□□□□ -0.62
COL4A3BP-202ENST00000357457 HUNKP57058 714 aa11.2□□□□□ -0.62
COL4A3BP-202ENST00000357457 ZNF408Q9H9D4 720 aa11.2□□□□□ -0.62
COL4A3BP-202ENST00000357457 KCNQ5Q9NR82 932 aa11.2□□□□□ -0.62
COL4A3BP-202ENST00000357457 DBF4Q9UBU7 674 aaPredicted RBP11.2□□□□□ -0.62
COL4A3BP-202ENST00000357457 EGFRP00533 1210 aa11.19□□□□□ -0.62
COL4A3BP-202ENST00000357457 VIL1P09327 827 aaKnown RBP11.19□□□□□ -0.62
COL4A3BP-202ENST00000357457 RPS8P62241 208 aaKnown RBP11.19□□□□□ -0.62
COL4A3BP-202ENST00000357457 GPSM2P81274 684 aa11.19□□□□□ -0.62
COL4A3BP-202ENST00000357457 RGMBQ6NW40 437 aa11.19□□□□□ -0.62
COL4A3BP-202ENST00000357457 DLK2Q6UY11 383 aa11.19□□□□□ -0.62
COL4A3BP-202ENST00000357457 KRT26Q7Z3Y9 468 aa11.19□□□□□ -0.62
COL4A3BP-202ENST00000357457 TBC1D16Q8TBP0 767 aa11.19□□□□□ -0.62
COL4A3BP-202ENST00000357457 DBNDD1Q9H9R9 158 aa11.19□□□□□ -0.62
COL4A3BP-202ENST00000357457 PODXL2Q9NZ53 605 aa11.19□□□□□ -0.62
COL4A3BP-202ENST00000357457 SCN9AQ15858 1988 aa11.19□□□□□ -0.62
COL4A3BP-202ENST00000357457 AKAP11Q9UKA4 1901 aa11.19□□□□□ -0.62
COL4A3BP-202ENST00000357457 RTL9Q8NET4 1388 aa11.18□□□□□ -0.62
COL4A3BP-202ENST00000357457 ATP5J2-PTCD1G3V325 749 aa11.18□□□□□ -0.62
COL4A3BP-202ENST00000357457 C6orf229H3BNL8 230 aa11.18□□□□□ -0.62
COL4A3BP-202ENST00000357457 RIMBP2O15034 1052 aa11.18□□□□□ -0.62
COL4A3BP-202ENST00000357457 ECE2O60344 883 aa11.18□□□□□ -0.62
COL4A3BP-202ENST00000357457 TBC1D10BQ4KMP7 808 aaPredicted RBP11.18□□□□□ -0.62
COL4A3BP-202ENST00000357457 HDGFL1Q5TGJ6 251 aa11.18□□□□□ -0.62
COL4A3BP-202ENST00000357457 C2orf69Q8N8R5 385 aa11.18□□□□□ -0.62
COL4A3BP-202ENST00000357457 CCDC102AQ96A19 550 aa11.18□□□□□ -0.62
COL4A3BP-202ENST00000357457 EYA3Q99504 573 aa11.18□□□□□ -0.62
COL4A3BP-202ENST00000357457 GBA2Q9HCG7 927 aaPredicted RBP11.18□□□□□ -0.62
COL4A3BP-202ENST00000357457 HYPKQ9NX55 129 aa11.18□□□□□ -0.62
COL4A3BP-202ENST00000357457 SAGE1Q9NXZ1 904 aa11.18□□□□□ -0.62
COL4A3BP-202ENST00000357457 COL4A1P02462 1669 aa11.17□□□□□ -0.62
COL4A3BP-202ENST00000357457 IRS4O14654 1257 aaPredicted RBP11.17□□□□□ -0.62
COL4A3BP-202ENST00000357457 DGKZQ13574 1117 aa11.17□□□□□ -0.62
COL4A3BP-202ENST00000357457 NEUROD2Q15784 382 aa11.17□□□□□ -0.62
COL4A3BP-202ENST00000357457 DOK7Q18PE1 504 aa11.17□□□□□ -0.62
COL4A3BP-202ENST00000357457 ZNF428Q96B54 188 aa11.17□□□□□ -0.62
COL4A3BP-202ENST00000357457 RUNDC1Q96C34 613 aa11.17□□□□□ -0.62
COL4A3BP-202ENST00000357457 DCPSQ96C86 337 aaKnown RBP11.17□□□□□ -0.62
COL4A3BP-202ENST00000357457 CFAP44Q96MT7 982 aa11.17□□□□□ -0.62
COL4A3BP-202ENST00000357457 ZNF280AP59817 542 aaPredicted RBP11.16□□□□□ -0.62
COL4A3BP-202ENST00000357457 RBM26Q5T8P6 1007 aaKnown RBP11.16□□□□□ -0.62
COL4A3BP-202ENST00000357457 DUSP27Q5VZP5 1158 aa11.16□□□□□ -0.62
COL4A3BP-202ENST00000357457 CCDC146Q8IYE0 955 aa11.16□□□□□ -0.62
COL4A3BP-202ENST00000357457 ZBTB38Q8NAP3 1195 aaPredicted RBP11.16□□□□□ -0.62
COL4A3BP-202ENST00000357457 ZC3H12CQ9C0D7 883 aaKnown RBP11.16□□□□□ -0.62
COL4A3BP-202ENST00000357457 LAS1LQ9Y4W2 734 aaKnown RBP11.16□□□□□ -0.62
COL4A3BP-202ENST00000357457 ZNF609O15014 1411 aa11.16□□□□□ -0.62
COL4A3BP-202ENST00000357457 PSME4Q14997 1843 aa11.15□□□□□ -0.62
COL4A3BP-202ENST00000357457 ADM5C9JUS6 153 aa11.15□□□□□ -0.62
COL4A3BP-202ENST00000357457 ZNF853P0CG23 659 aa11.15□□□□□ -0.62
COL4A3BP-202ENST00000357457 HSP90B1P14625 803 aaKnown RBP11.15□□□□□ -0.62
COL4A3BP-202ENST00000357457 ZNF157P51786 506 aaPredicted RBP11.15□□□□□ -0.62
COL4A3BP-202ENST00000357457 KIF23Q02241 960 aaPredicted RBP11.15□□□□□ -0.62
COL4A3BP-202ENST00000357457 RTL5Q5HYW3 569 aaPredicted RBP11.15□□□□□ -0.62
COL4A3BP-202ENST00000357457 AGBL3Q8NEM8 1001 aa11.15□□□□□ -0.62
COL4A3BP-202ENST00000357457 CSRNP1Q96S65 589 aa11.15□□□□□ -0.62
COL4A3BP-202ENST00000357457 GMLQ99445 158 aa11.15□□□□□ -0.62
COL4A3BP-202ENST00000357457 SEC31BQ9NQW1 1179 aa11.15□□□□□ -0.62
COL4A3BP-202ENST00000357457 RNF186Q9NXI6 227 aa11.15□□□□□ -0.62
COL4A3BP-202ENST00000357457 MYBBP1AQ9BQG0 1328 aaKnown RBP11.14□□□□□ -0.63
COL4A3BP-202ENST00000357457 SLC10A3P09131 477 aa11.14□□□□□ -0.63
COL4A3BP-202ENST00000357457 KIF4BQ2VIQ3 1234 aa11.14□□□□□ -0.63
COL4A3BP-202ENST00000357457 SULF1Q8IWU6 871 aa11.14□□□□□ -0.63
COL4A3BP-202ENST00000357457 REM2Q8IYK8 340 aaPredicted RBP11.14□□□□□ -0.63
COL4A3BP-202ENST00000357457 CCDC191Q8NCU4 936 aa11.14□□□□□ -0.63
COL4A3BP-202ENST00000357457 ADAMTS8Q9UP79 889 aa11.14□□□□□ -0.63
COL4A3BP-202ENST00000357457 TRPA1O75762 1119 aa11.13□□□□□ -0.63
COL4A3BP-202ENST00000357457 PCCAP05165 728 aaPredicted RBP11.13□□□□□ -0.63
COL4A3BP-202ENST00000357457 RSBN1LQ6PCB5 846 aaPredicted RBP11.13□□□□□ -0.63
COL4A3BP-202ENST00000357457 RIC3Q7Z5B4 369 aa11.13□□□□□ -0.63
COL4A3BP-202ENST00000357457 SPDYE1Q8NFV5 336 aaPredicted RBP11.13□□□□□ -0.63
COL4A3BP-202ENST00000357457 MBIPQ9NS73 344 aa11.13□□□□□ -0.63
COL4A3BP-202ENST00000357457 GGA3Q9NZ52 723 aa11.13□□□□□ -0.63
COL4A3BP-202ENST00000357457 GGA1Q9UJY5 639 aa11.13□□□□□ -0.63
COL4A3BP-202ENST00000357457 ASTN2O75129 1339 aaPredicted RBP11.12□□□□□ -0.63
COL4A3BP-202ENST00000357457 PDE8AO60658 829 aa11.12□□□□□ -0.63
COL4A3BP-202ENST00000357457 UFL1O94874 794 aa11.12□□□□□ -0.63
COL4A3BP-202ENST00000357457 FKBP1BP68106 108 aa11.12□□□□□ -0.63
COL4A3BP-202ENST00000357457 SCARF1Q14162 830 aa11.12□□□□□ -0.63
COL4A3BP-202ENST00000357457 CCDC152Q4G0S7 254 aa11.12□□□□□ -0.63
COL4A3BP-202ENST00000357457 PODNQ7Z5L7 613 aa11.12□□□□□ -0.63
COL4A3BP-202ENST00000357457 CDCA5Q96FF9 252 aa11.12□□□□□ -0.63
COL4A3BP-202ENST00000357457 PHAXQ9H814 394 aaKnown RBP11.12□□□□□ -0.63
COL4A3BP-202ENST00000357457 ANKIB1Q9P2G1 1089 aa11.12□□□□□ -0.63
COL4A3BP-202ENST00000357457 PITPNM2Q9BZ72 1349 aa11.11□□□□□ -0.63
COL4A3BP-202ENST00000357457 GOLGA2Q08379 1002 aa11.11□□□□□ -0.63
COL4A3BP-202ENST00000357457 WDR43Q15061 677 aaKnown RBP eCLIP11.11□□□□□ -0.63
COL4A3BP-202ENST00000357457 ANGEL2Q5VTE6 544 aaKnown RBP11.11□□□□□ -0.63
COL4A3BP-202ENST00000357457 RASAL3Q86YV0 1011 aa11.11□□□□□ -0.63
COL4A3BP-202ENST00000357457 METTL22Q9BUU2 404 aaPredicted RBP11.11□□□□□ -0.63
COL4A3BP-202ENST00000357457 IFT57Q9NWB7 429 aa11.11□□□□□ -0.63
COL4A3BP-202ENST00000357457 XDHP47989 1333 aa11.1□□□□□ -0.63
COL4A3BP-202ENST00000357457 G3V3G9 751 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms