RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 TSR2Q969E8 191 aaKnown RBP20.53■□□□□ 0.88
PDGFA-201ENST00000354513 METTL22Q9BUU2 404 aaPredicted RBP20.53■□□□□ 0.88
PDGFA-201ENST00000354513 PODXL2Q9NZ53 605 aa20.53■□□□□ 0.88
PDGFA-201ENST00000354513 ZNF609O15014 1411 aa20.52■□□□□ 0.87
PDGFA-201ENST00000354513 C6orf229H3BNL8 230 aa20.52■□□□□ 0.87
PDGFA-201ENST00000354513 CELF2O95319 508 aaKnown RBP20.52■□□□□ 0.87
PDGFA-201ENST00000354513 SAMD7Q7Z3H4 446 aa20.52■□□□□ 0.87
PDGFA-201ENST00000354513 AOC2O75106 756 aa20.51■□□□□ 0.87
PDGFA-201ENST00000354513 IGKV5-2P06315 115 aa20.51■□□□□ 0.87
PDGFA-201ENST00000354513 DPF2Q92785 391 aa20.51■□□□□ 0.87
PDGFA-201ENST00000354513 CWC25Q9NXE8 425 aaPredicted RBP20.51■□□□□ 0.87
PDGFA-201ENST00000354513 PDE8AO60658 829 aa20.5■□□□□ 0.87
PDGFA-201ENST00000354513 MAP2K1Q02750 393 aaPredicted RBP20.5■□□□□ 0.87
PDGFA-201ENST00000354513 CCDC85AQ96PX6 553 aaPredicted RBP20.5■□□□□ 0.87
PDGFA-201ENST00000354513 MAP3K2Q9Y2U5 619 aa20.5■□□□□ 0.87
PDGFA-201ENST00000354513 ECE1P42892 770 aa20.49■□□□□ 0.87
PDGFA-201ENST00000354513 GRM1Q13255 1194 aa20.49■□□□□ 0.87
PDGFA-201ENST00000354513 TBC1D10BQ4KMP7 808 aaPredicted RBP20.49■□□□□ 0.87
PDGFA-201ENST00000354513 CCDC30Q5VVM6 783 aa20.49■□□□□ 0.87
PDGFA-201ENST00000354513 PAXIP1Q6ZW49 1069 aaPredicted RBP20.49■□□□□ 0.87
PDGFA-201ENST00000354513 G2E3Q7L622 706 aa20.49■□□□□ 0.87
PDGFA-201ENST00000354513 H7C1D1 291 aa20.48■□□□□ 0.87
PDGFA-201ENST00000354513 UFL1O94874 794 aa20.48■□□□□ 0.87
PDGFA-201ENST00000354513 CDC37L1Q7L3B6 337 aa20.48■□□□□ 0.87
PDGFA-201ENST00000354513 EYA3Q99504 573 aa20.48■□□□□ 0.87
PDGFA-201ENST00000354513 CASP8AP2Q9UKL3 1982 aa20.48■□□□□ 0.87
PDGFA-201ENST00000354513 WTIPA6NIX2 430 aaPredicted RBP20.47■□□□□ 0.87
PDGFA-201ENST00000354513 CCDC27Q2M243 656 aa20.47■□□□□ 0.87
PDGFA-201ENST00000354513 CCDC152Q4G0S7 254 aa20.47■□□□□ 0.87
PDGFA-201ENST00000354513 USP48Q86UV5 1035 aa20.47■□□□□ 0.87
PDGFA-201ENST00000354513 HHIPL1Q96JK4 782 aa20.47■□□□□ 0.87
PDGFA-201ENST00000354513 ZNF408Q9H9D4 720 aa20.47■□□□□ 0.87
PDGFA-201ENST00000354513 PI4KAP2A4QPH2 592 aa20.46■□□□□ 0.87
PDGFA-201ENST00000354513 VIL1P09327 827 aaKnown RBP20.46■□□□□ 0.87
PDGFA-201ENST00000354513 RPS12P25398 132 aaKnown RBP20.46■□□□□ 0.87
PDGFA-201ENST00000354513 KSR2Q6VAB6 950 aa20.46■□□□□ 0.87
PDGFA-201ENST00000354513 WWC1Q8IX03 1113 aa20.46■□□□□ 0.87
PDGFA-201ENST00000354513 PI4KAP1Q8N8J0 262 aa20.46■□□□□ 0.87
PDGFA-201ENST00000354513 ASTN2O75129 1339 aaPredicted RBP20.45■□□□□ 0.86
PDGFA-201ENST00000354513 ADM5C9JUS6 153 aa20.45■□□□□ 0.86
PDGFA-201ENST00000354513 DDX58O95786 925 aaKnown RBP20.45■□□□□ 0.86
PDGFA-201ENST00000354513 CTSWP56202 376 aa20.45■□□□□ 0.86
PDGFA-201ENST00000354513 CWF19L2Q2TBE0 894 aaKnown RBP20.45■□□□□ 0.86
PDGFA-201ENST00000354513 GGA1Q9UJY5 639 aa20.45■□□□□ 0.86
PDGFA-201ENST00000354513 AKAP11Q9UKA4 1901 aa20.44■□□□□ 0.86
PDGFA-201ENST00000354513 MAP2K2P36507 400 aa20.44■□□□□ 0.86
PDGFA-201ENST00000354513 ZIC5Q96T25 663 aa20.44■□□□□ 0.86
PDGFA-201ENST00000354513 ZC3H12CQ9C0D7 883 aaKnown RBP20.44■□□□□ 0.86
PDGFA-201ENST00000354513 TSKSQ9UJT2 592 aa20.44■□□□□ 0.86
PDGFA-201ENST00000354513 NEURL1BA8MQ27 555 aa20.43■□□□□ 0.86
PDGFA-201ENST00000354513 HSP90B1P14625 803 aaKnown RBP20.43■□□□□ 0.86
PDGFA-201ENST00000354513 TWISTNBQ3B726 338 aaPredicted RBP20.43■□□□□ 0.86
PDGFA-201ENST00000354513 TTLL11Q8NHH1 800 aa20.43■□□□□ 0.86
PDGFA-201ENST00000354513 GREM2Q9H772 168 aa20.43■□□□□ 0.86
PDGFA-201ENST00000354513 ANKIB1Q9P2G1 1089 aa20.43■□□□□ 0.86
PDGFA-201ENST00000354513 XDHP47989 1333 aa20.43■□□□□ 0.86
PDGFA-201ENST00000354513 ECM29Q5VYK3 1845 aa20.42■□□□□ 0.86
PDGFA-201ENST00000354513 KIF4BQ2VIQ3 1234 aa20.42■□□□□ 0.86
PDGFA-201ENST00000354513 RBM26Q5T8P6 1007 aaKnown RBP20.42■□□□□ 0.86
PDGFA-201ENST00000354513 ANKRD18AQ8IVF6 992 aa20.42■□□□□ 0.86
PDGFA-201ENST00000354513 GMLQ99445 158 aa20.42■□□□□ 0.86
PDGFA-201ENST00000354513 PAPPA2Q9BXP8 1791 aa20.41■□□□□ 0.86
PDGFA-201ENST00000354513 ZNF280AP59817 542 aaPredicted RBP20.41■□□□□ 0.86
PDGFA-201ENST00000354513 KRT26Q7Z3Y9 468 aa20.41■□□□□ 0.86
PDGFA-201ENST00000354513 IL16Q14005 1332 aa20.41■□□□□ 0.86
PDGFA-201ENST00000354513 FANCIQ9NVI1 1328 aa20.41■□□□□ 0.86
PDGFA-201ENST00000354513 MED23Q9ULK4 1368 aa20.41■□□□□ 0.86
PDGFA-201ENST00000354513 FAM155AB1AL88 458 aaPredicted RBP20.4■□□□□ 0.86
PDGFA-201ENST00000354513 H7C1W4 665 aa20.4■□□□□ 0.86
PDGFA-201ENST00000354513 BRPF1P55201 1214 aaPredicted RBP20.4■□□□□ 0.86
PDGFA-201ENST00000354513 CASP7P55210 303 aa20.4■□□□□ 0.86
PDGFA-201ENST00000354513 RSBN1LQ6PCB5 846 aaPredicted RBP20.4■□□□□ 0.86
PDGFA-201ENST00000354513 GGA3Q9NZ52 723 aa20.4■□□□□ 0.86
PDGFA-201ENST00000354513 HUNKP57058 714 aa20.39■□□□□ 0.85
PDGFA-201ENST00000354513 ABHD8Q96I13 439 aa20.39■□□□□ 0.85
PDGFA-201ENST00000354513 STK31Q9BXU1 1019 aa20.39■□□□□ 0.85
PDGFA-201ENST00000354513 MINPP1Q9UNW1 487 aa20.39■□□□□ 0.85
PDGFA-201ENST00000354513 ATP2B4P23634 1241 aa20.38■□□□□ 0.85
PDGFA-201ENST00000354513 NCBP3Q53F19 620 aaKnown RBP20.38■□□□□ 0.85
PDGFA-201ENST00000354513 UBE3BQ7Z3V4 1068 aa20.38■□□□□ 0.85
PDGFA-201ENST00000354513 CHMP4AQ9BY43 222 aa20.38■□□□□ 0.85
PDGFA-201ENST00000354513 SLC4A2P04920 1241 aa20.37■□□□□ 0.85
PDGFA-201ENST00000354513 FLIIQ13045 1269 aa20.37■□□□□ 0.85
PDGFA-201ENST00000354513 AGBL3Q8NEM8 1001 aa20.37■□□□□ 0.85
PDGFA-201ENST00000354513 DCPSQ96C86 337 aaKnown RBP20.37■□□□□ 0.85
PDGFA-201ENST00000354513 CDC5LQ99459 802 aaKnown RBP20.37■□□□□ 0.85
PDGFA-201ENST00000354513 GBA2Q9HCG7 927 aaPredicted RBP20.37■□□□□ 0.85
PDGFA-201ENST00000354513 BSDC1Q9NW68 430 aaPredicted RBP20.37■□□□□ 0.85
PDGFA-201ENST00000354513 NEXNQ0ZGT2 675 aa20.36■□□□□ 0.85
PDGFA-201ENST00000354513 TXNRD3Q86VQ6 643 aa20.36■□□□□ 0.85
PDGFA-201ENST00000354513 BEGAINQ9BUH8 593 aa20.36■□□□□ 0.85
PDGFA-201ENST00000354513 PLA2G12BQ9BX93 195 aa20.36■□□□□ 0.85
PDGFA-201ENST00000354513 LAMB1P07942 1786 aa20.36■□□□□ 0.85
PDGFA-201ENST00000354513 GCKRQ14397 625 aa20.35■□□□□ 0.85
PDGFA-201ENST00000354513 CDCA5Q96FF9 252 aa20.35■□□□□ 0.85
PDGFA-201ENST00000354513 MXD3Q9BW11 206 aa20.35■□□□□ 0.85
PDGFA-201ENST00000354513 USP17L3A6NCW0 530 aa20.34■□□□□ 0.85
PDGFA-201ENST00000354513 USP17L4A6NCW7 530 aa20.34■□□□□ 0.85
PDGFA-201ENST00000354513 G3V3G9 751 aa20.34■□□□□ 0.85
PDGFA-201ENST00000354513 VAMP4O75379 141 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms