RNA–Protein interactions for RNA: ENST00000349460.8

EPB41-203, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best) BASIC

Gene EPB41, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-203ENST00000349460 C4BP0C0L5 1744 aa12.92□□□□□ -0.34
EPB41-203ENST00000349460 LAMA4Q16363 1823 aa12.92□□□□□ -0.34
EPB41-203ENST00000349460 C4AP0C0L4 1744 aa12.92□□□□□ -0.34
EPB41-203ENST00000349460 NUTM2BA6NNL0 878 aaPredicted RBP12.92□□□□□ -0.34
EPB41-203ENST00000349460 NUTM2EB1AL46 878 aaPredicted RBP12.92□□□□□ -0.34
EPB41-203ENST00000349460 FGFR2P21802 821 aa12.92□□□□□ -0.34
EPB41-203ENST00000349460 ARID4AP29374 1257 aaPredicted RBP12.92□□□□□ -0.34
EPB41-203ENST00000349460 NUTM2AQ8IVF1 878 aaPredicted RBP12.92□□□□□ -0.34
EPB41-203ENST00000349460 RGS22Q8NE09 1264 aa12.92□□□□□ -0.34
EPB41-203ENST00000349460 TRMT112Q9UI30 125 aaKnown RBP12.92□□□□□ -0.34
EPB41-203ENST00000349460 RGPD3A6NKT7 1758 aaPredicted RBP12.92□□□□□ -0.34
EPB41-203ENST00000349460 RGPD4Q7Z3J3 1758 aa12.92□□□□□ -0.34
EPB41-203ENST00000349460 HSP90AA1P07900 732 aaKnown RBP12.91□□□□□ -0.34
EPB41-203ENST00000349460 UQCRFS1P1P0C7P4 283 aa12.91□□□□□ -0.34
EPB41-203ENST00000349460 FAM89AQ96GI7 184 aa12.91□□□□□ -0.34
EPB41-203ENST00000349460 RPS6KA4O75676 772 aa12.91□□□□□ -0.34
EPB41-203ENST00000349460 HMGB1P09429 215 aaKnown RBP12.91□□□□□ -0.34
EPB41-203ENST00000349460 ITGA6P23229 1130 aa12.91□□□□□ -0.34
EPB41-203ENST00000349460 TTF1Q15361 905 aaPredicted RBP12.91□□□□□ -0.34
EPB41-203ENST00000349460 SF3B3Q15393 1217 aaKnown RBP12.91□□□□□ -0.34
EPB41-203ENST00000349460 LRRC24Q50LG9 513 aa12.91□□□□□ -0.34
EPB41-203ENST00000349460 CREB3L3Q68CJ9 461 aa12.91□□□□□ -0.34
EPB41-203ENST00000349460 TNPO1Q92973 898 aaKnown RBP12.91□□□□□ -0.34
EPB41-203ENST00000349460 LIMCH1Q9UPQ0 1083 aa12.91□□□□□ -0.34
EPB41-203ENST00000349460 ZSCAN25Q6NSZ9 544 aa12.91□□□□□ -0.34
EPB41-203ENST00000349460 RUFY3Q7L099 469 aa12.91□□□□□ -0.34
EPB41-203ENST00000349460 CHMP4CQ96CF2 233 aa12.91□□□□□ -0.34
EPB41-203ENST00000349460 GJD4Q96KN9 370 aaPredicted RBP12.91□□□□□ -0.34
EPB41-203ENST00000349460 RBM8AQ9Y5S9 174 aaKnown RBP12.91□□□□□ -0.34
EPB41-203ENST00000349460 ZMYM6O95789 1325 aa12.91□□□□□ -0.34
EPB41-203ENST00000349460 A0A0D9SFI3 127 aa12.9□□□□□ -0.34
EPB41-203ENST00000349460 PDE8BO95263 885 aa12.9□□□□□ -0.34
EPB41-203ENST00000349460 ADRA2BP18089 450 aa12.9□□□□□ -0.34
EPB41-203ENST00000349460 CCDC152Q4G0S7 254 aa12.9□□□□□ -0.34
EPB41-203ENST00000349460 SYTL4Q96C24 671 aaPredicted RBP12.9□□□□□ -0.34
EPB41-203ENST00000349460 TRPC5Q9UL62 973 aaPredicted RBP12.9□□□□□ -0.34
EPB41-203ENST00000349460 KIAA1551Q9HCM1 1747 aa12.9□□□□□ -0.34
EPB41-203ENST00000349460 SLC27A2O14975 620 aa12.9□□□□□ -0.34
EPB41-203ENST00000349460 RNF113AO15541 343 aaKnown RBP12.9□□□□□ -0.34
EPB41-203ENST00000349460 PTH1RQ03431 593 aa12.9□□□□□ -0.34
EPB41-203ENST00000349460 GSE1Q14687 1217 aa12.9□□□□□ -0.34
EPB41-203ENST00000349460 CDC5LQ99459 802 aaKnown RBP12.9□□□□□ -0.34
EPB41-203ENST00000349460 NYXQ9GZU5 481 aa12.9□□□□□ -0.34
EPB41-203ENST00000349460 CYP46A1Q9Y6A2 500 aa12.9□□□□□ -0.34
EPB41-203ENST00000349460 PDS5AQ29RF7 1337 aaKnown RBP12.89□□□□□ -0.35
EPB41-203ENST00000349460 MAP4K4O95819 1239 aaPredicted RBP12.89□□□□□ -0.35
EPB41-203ENST00000349460 FAM98CQ17RN3 349 aaKnown RBP12.89□□□□□ -0.35
EPB41-203ENST00000349460 LPIN2Q92539 896 aa12.89□□□□□ -0.35
EPB41-203ENST00000349460 XAGE2Q96GT9 111 aa12.89□□□□□ -0.35
EPB41-203ENST00000349460 NARFQ9UHQ1 456 aa12.89□□□□□ -0.35
EPB41-203ENST00000349460 CHMP3Q9Y3E7 222 aa12.89□□□□□ -0.35
EPB41-203ENST00000349460 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.89□□□□□ -0.35
EPB41-203ENST00000349460 WDR19Q8NEZ3 1342 aa12.89□□□□□ -0.35
EPB41-203ENST00000349460 IFIT1P09914 478 aaKnown RBP12.89□□□□□ -0.35
EPB41-203ENST00000349460 PUM3Q15397 648 aaKnown RBP12.89□□□□□ -0.35
EPB41-203ENST00000349460 SUSD4Q5VX71 490 aa12.89□□□□□ -0.35
EPB41-203ENST00000349460 FAM227BQ96M60 508 aa12.89□□□□□ -0.35
EPB41-203ENST00000349460 C8orf37Q96NL8 207 aa12.89□□□□□ -0.35
EPB41-203ENST00000349460 GREM2Q9H772 168 aa12.89□□□□□ -0.35
EPB41-203ENST00000349460 ATP2B3Q16720 1220 aa12.88□□□□□ -0.35
EPB41-203ENST00000349460 TAF7LQ5H9L4 462 aa12.88□□□□□ -0.35
EPB41-203ENST00000349460 RASEFQ8IZ41 740 aa12.88□□□□□ -0.35
EPB41-203ENST00000349460 JARID2Q92833 1246 aaPredicted RBP12.88□□□□□ -0.35
EPB41-203ENST00000349460 GOLGA6L22H0YM25 854 aa12.88□□□□□ -0.35
EPB41-203ENST00000349460 BRD1O95696 1058 aa12.88□□□□□ -0.35
EPB41-203ENST00000349460 LINC00116Q8NCU8 138 aa12.88□□□□□ -0.35
EPB41-203ENST00000349460 DUOX1Q9NRD9 1551 aa12.88□□□□□ -0.35
EPB41-203ENST00000349460 UBR3Q6ZT12 1888 aa12.88□□□□□ -0.35
EPB41-203ENST00000349460 LDHAL6AQ6ZMR3 332 aa12.88□□□□□ -0.35
EPB41-203ENST00000349460 PUS3Q9BZE2 481 aaKnown RBP12.88□□□□□ -0.35
EPB41-203ENST00000349460 CCDC9Q9Y3X0 531 aaKnown RBP12.88□□□□□ -0.35
EPB41-203ENST00000349460 AGXT2Q9BYV1 514 aa12.87□□□□□ -0.35
EPB41-203ENST00000349460 KAT6BQ8WYB5 2073 aa12.87□□□□□ -0.35
EPB41-203ENST00000349460 UBE3CQ15386 1083 aa12.87□□□□□ -0.35
EPB41-203ENST00000349460 BCL11BQ9C0K0 894 aaPredicted RBP12.87□□□□□ -0.35
EPB41-203ENST00000349460 RPS6KB1P23443 525 aa12.86□□□□□ -0.35
EPB41-203ENST00000349460 METTL24Q5JXM2 366 aa12.86□□□□□ -0.35
EPB41-203ENST00000349460 TTC39AQ5SRH9 613 aa12.86□□□□□ -0.35
EPB41-203ENST00000349460 ACSBG1Q96GR2 724 aa12.86□□□□□ -0.35
EPB41-203ENST00000349460 ZNF594Q96JF6 807 aaPredicted RBP12.86□□□□□ -0.35
EPB41-203ENST00000349460 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.86□□□□□ -0.355e-9■■□□□ 13.7
EPB41-203ENST00000349460 CTNNA3Q9UI47 895 aa12.86□□□□□ -0.35
EPB41-203ENST00000349460 TBC1D2BQ9UPU7 963 aa12.86□□□□□ -0.35
EPB41-203ENST00000349460 TIAM2Q8IVF5 1701 aa12.86□□□□□ -0.35
EPB41-203ENST00000349460 PDRG1Q9NUG6 133 aa12.86□□□□□ -0.35
EPB41-203ENST00000349460 TIMM10P62072 90 aa12.86□□□□□ -0.35
EPB41-203ENST00000349460 SLC27A3Q5K4L6 730 aa12.86□□□□□ -0.35
EPB41-203ENST00000349460 PRPF40BQ6NWY9 871 aaKnown RBP12.86□□□□□ -0.35
EPB41-203ENST00000349460 APPBP2Q92624 585 aa12.86□□□□□ -0.35
EPB41-203ENST00000349460 MAST2Q6P0Q8 1798 aa12.86□□□□□ -0.35
EPB41-203ENST00000349460 GPTP24298 496 aa12.85□□□□□ -0.35
EPB41-203ENST00000349460 AK2P54819 239 aa12.85□□□□□ -0.35
EPB41-203ENST00000349460 NEUROD6Q96NK8 337 aa12.85□□□□□ -0.35
EPB41-203ENST00000349460 WDR33Q9C0J8 1336 aaKnown RBP12.85□□□□□ -0.35
EPB41-203ENST00000349460 BAG4O95429 457 aaKnown RBP12.85□□□□□ -0.35
EPB41-203ENST00000349460 SLC5A1P13866 664 aa12.85□□□□□ -0.35
EPB41-203ENST00000349460 ZNF589Q86UQ0 364 aaPredicted RBP12.85□□□□□ -0.35
EPB41-203ENST00000349460 CNNM1Q9NRU3 951 aa12.85□□□□□ -0.35
EPB41-203ENST00000349460 KCNQ2O43526 872 aa12.84□□□□□ -0.35
EPB41-203ENST00000349460 CASTP20810 708 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms