RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 RRAGCQ9HB90 399 aa27.85■■■□□ 2.05
SNX3-202ENST00000349379 MINPP1Q9UNW1 487 aa27.85■■■□□ 2.05
SNX3-202ENST00000349379 XDHP47989 1333 aa27.85■■■□□ 2.05
SNX3-202ENST00000349379 IFIT5Q13325 482 aaKnown RBP27.84■■■□□ 2.05
SNX3-202ENST00000349379 L3MBTL3Q96JM7 780 aaPredicted RBP27.84■■■□□ 2.05
SNX3-202ENST00000349379 SCN9AQ15858 1988 aa27.84■■■□□ 2.05
SNX3-202ENST00000349379 ANKRD44Q8N8A2 993 aa27.83■■■□□ 2.05
SNX3-202ENST00000349379 BICC1Q9H694 974 aaKnown RBP27.83■■■□□ 2.05
SNX3-202ENST00000349379 ANKIB1Q9P2G1 1089 aa27.83■■■□□ 2.05
SNX3-202ENST00000349379 C6orf229H3BNL8 230 aa27.82■■■□□ 2.04
SNX3-202ENST00000349379 WASHC4Q2M389 1173 aa27.82■■■□□ 2.04
SNX3-202ENST00000349379 EYA3Q99504 573 aa27.82■■■□□ 2.04
SNX3-202ENST00000349379 GGA1Q9UJY5 639 aa27.82■■■□□ 2.04
SNX3-202ENST00000349379 ZNRF3Q9ULT6 936 aa27.82■■■□□ 2.04
SNX3-202ENST00000349379 TNNQ9UQP3 1299 aa27.82■■■□□ 2.04
SNX3-202ENST00000349379 CHMP3Q9Y3E7 222 aa27.82■■■□□ 2.04
SNX3-202ENST00000349379 UFL1O94874 794 aa27.81■■■□□ 2.04
SNX3-202ENST00000349379 VEGFAP15692 232 aaPredicted RBP27.81■■■□□ 2.04
SNX3-202ENST00000349379 EIF6P56537 245 aaKnown RBP27.81■■■□□ 2.04
SNX3-202ENST00000349379 C1QTNF8P60827 252 aa27.81■■■□□ 2.04
SNX3-202ENST00000349379 GPC2Q8N158 579 aa27.81■■■□□ 2.04
SNX3-202ENST00000349379 FRAT1Q92837 279 aaPredicted RBP27.81■■■□□ 2.04
SNX3-202ENST00000349379 MPHOSPH8Q99549 860 aa27.81■■■□□ 2.04
SNX3-202ENST00000349379 CCDC57Q2TAC2 916 aa27.8■■■□□ 2.04
SNX3-202ENST00000349379 ZKSCAN2Q63HK3 967 aa27.8■■■□□ 2.04
SNX3-202ENST00000349379 ATP2B4P23634 1241 aa27.79■■■□□ 2.04
SNX3-202ENST00000349379 GPR101Q96P66 508 aaPredicted RBP27.79■■■□□ 2.04
SNX3-202ENST00000349379 ZNF646O15015 1829 aaPredicted RBP27.78■■■□□ 2.04
SNX3-202ENST00000349379 YDJCA8MPS7 323 aa27.78■■■□□ 2.04
SNX3-202ENST00000349379 TOMM70O94826 608 aa27.78■■■□□ 2.04
SNX3-202ENST00000349379 ZNF594Q96JF6 807 aaPredicted RBP27.77■■■□□ 2.04
SNX3-202ENST00000349379 ADAMTSL1Q8N6G6 1762 aa27.76■■■□□ 2.03
SNX3-202ENST00000349379 MED23Q9ULK4 1368 aa27.76■■■□□ 2.03
SNX3-202ENST00000349379 RIMBP2O15034 1052 aa27.76■■■□□ 2.03
SNX3-202ENST00000349379 UBTFL1P0CB47 393 aaPredicted RBP27.76■■■□□ 2.03
SNX3-202ENST00000349379 CHRNDQ07001 517 aa27.76■■■□□ 2.03
SNX3-202ENST00000349379 CXCL9Q07325 125 aa27.76■■■□□ 2.03
SNX3-202ENST00000349379 MEIS3Q99687 375 aa27.76■■■□□ 2.03
SNX3-202ENST00000349379 ZC3H12CQ9C0D7 883 aaKnown RBP27.76■■■□□ 2.03
SNX3-202ENST00000349379 ANKRD2Q9GZV1 360 aa27.76■■■□□ 2.03
SNX3-202ENST00000349379 LEMD3Q9Y2U8 911 aa27.76■■■□□ 2.03
SNX3-202ENST00000349379 WTIPA6NIX2 430 aaPredicted RBP27.75■■■□□ 2.03
SNX3-202ENST00000349379 RBM46Q8TBY0 533 aaKnown RBP27.74■■■□□ 2.03
SNX3-202ENST00000349379 CLUAP1Q96AJ1 413 aa27.74■■■□□ 2.03
SNX3-202ENST00000349379 DBNDD1Q9H9R9 158 aa27.74■■■□□ 2.03
SNX3-202ENST00000349379 IQCA1LA6NCM1 817 aa27.73■■■□□ 2.03
SNX3-202ENST00000349379 TAF7LQ5H9L4 462 aa27.73■■■□□ 2.03
SNX3-202ENST00000349379 LDHAL6AQ6ZMR3 332 aa27.73■■■□□ 2.03
SNX3-202ENST00000349379 ECE2O60344 883 aa27.72■■■□□ 2.03
SNX3-202ENST00000349379 CIAPIN1Q6FI81 312 aa27.72■■■□□ 2.03
SNX3-202ENST00000349379 C16orf71Q8IYS4 520 aaPredicted RBP27.72■■■□□ 2.03
SNX3-202ENST00000349379 HDAC5Q9UQL6 1122 aa27.72■■■□□ 2.03
SNX3-202ENST00000349379 GJA3Q9Y6H8 435 aa27.72■■■□□ 2.03
SNX3-202ENST00000349379 ZNF804BA4D1E1 1349 aa27.71■■■□□ 2.03
SNX3-202ENST00000349379 RFX5P48382 616 aaPredicted RBP27.71■■■□□ 2.03
SNX3-202ENST00000349379 SCNN1DP51172 638 aa27.71■■■□□ 2.03
SNX3-202ENST00000349379 DOK7Q18PE1 504 aa27.71■■■□□ 2.03
SNX3-202ENST00000349379 TMEM57Q8N5G2 664 aa27.71■■■□□ 2.03
SNX3-202ENST00000349379 TAF1DQ9H5J8 278 aaPredicted RBP27.71■■■□□ 2.03
SNX3-202ENST00000349379 LRRFIP2Q9Y608 721 aaKnown RBP27.71■■■□□ 2.03
SNX3-202ENST00000349379 IRS2Q9Y4H2 1338 aa27.7■■■□□ 2.03
SNX3-202ENST00000349379 RAD17O75943 681 aa27.7■■■□□ 2.02
SNX3-202ENST00000349379 GNAI3P08754 354 aa27.7■■■□□ 2.02
SNX3-202ENST00000349379 CNNM1Q9NRU3 951 aa27.7■■■□□ 2.02
SNX3-202ENST00000349379 HACL1Q9UJ83 578 aa27.7■■■□□ 2.02
SNX3-202ENST00000349379 TNIP1Q15025 636 aa27.69■■■□□ 2.02
SNX3-202ENST00000349379 PUS3Q9BZE2 481 aaKnown RBP27.69■■■□□ 2.02
SNX3-202ENST00000349379 RIPOR2Q9Y4F9 1068 aa27.69■■■□□ 2.02
SNX3-202ENST00000349379 TXNRD3Q86VQ6 643 aa27.68■■■□□ 2.02
SNX3-202ENST00000349379 DZIP1LQ8IYY4 767 aaKnown RBP27.68■■■□□ 2.02
SNX3-202ENST00000349379 HELBQ8NG08 1087 aaPredicted RBP27.68■■■□□ 2.02
SNX3-202ENST00000349379 ZNF609O15014 1411 aa27.67■■■□□ 2.02
SNX3-202ENST00000349379 TAF5LO75529 589 aa27.67■■■□□ 2.02
SNX3-202ENST00000349379 RLBP1P12271 317 aa27.67■■■□□ 2.02
SNX3-202ENST00000349379 C15orf52Q6ZUT6 534 aaKnown RBP27.67■■■□□ 2.02
SNX3-202ENST00000349379 KCNQ5Q9NR82 932 aa27.67■■■□□ 2.02
SNX3-202ENST00000349379 RCAN3Q9UKA8 241 aa27.67■■■□□ 2.02
SNX3-202ENST00000349379 KLRK1P26718 216 aa27.66■■■□□ 2.02
SNX3-202ENST00000349379 EPHX2P34913 555 aa27.66■■■□□ 2.02
SNX3-202ENST00000349379 FSTL1Q12841 308 aa27.66■■■□□ 2.02
SNX3-202ENST00000349379 SNAP23O00161 211 aa27.65■■■□□ 2.02
SNX3-202ENST00000349379 PSMD14O00487 310 aa27.65■■■□□ 2.02
SNX3-202ENST00000349379 PTPN12Q05209 780 aaKnown RBP27.65■■■□□ 2.02
SNX3-202ENST00000349379 LRRC24Q50LG9 513 aa27.65■■■□□ 2.02
SNX3-202ENST00000349379 PODNQ7Z5L7 613 aa27.65■■■□□ 2.02
SNX3-202ENST00000349379 FTSJ3Q8IY81 847 aaKnown RBP27.65■■■□□ 2.02
SNX3-202ENST00000349379 KLHDC4Q8TBB5 520 aa27.65■■■□□ 2.02
SNX3-202ENST00000349379 GPRC5DQ9NZD1 345 aa27.65■■■□□ 2.02
SNX3-202ENST00000349379 MROH5Q6ZUA9 1318 aa27.65■■■□□ 2.02
SNX3-202ENST00000349379 GMPSP49915 693 aaPredicted RBP27.64■■■□□ 2.02
SNX3-202ENST00000349379 MTX1Q13505 466 aa27.64■■■□□ 2.02
SNX3-202ENST00000349379 SMC1BQ8NDV3 1235 aa27.64■■■□□ 2.02
SNX3-202ENST00000349379 COA1Q9GZY4 146 aa27.64■■■□□ 2.02
SNX3-202ENST00000349379 G3V3G9 751 aa27.63■■■□□ 2.01
SNX3-202ENST00000349379 POTEIP0CG38 1075 aa27.63■■■□□ 2.01
SNX3-202ENST00000349379 POTEJP0CG39 1038 aa27.63■■■□□ 2.01
SNX3-202ENST00000349379 LMOD1P29536 600 aaPredicted RBP27.63■■■□□ 2.01
SNX3-202ENST00000349379 EPS15P42566 896 aa27.63■■■□□ 2.01
SNX3-202ENST00000349379 KCNJ4P48050 445 aa27.63■■■□□ 2.01
SNX3-202ENST00000349379 DCAF8Q5TAQ9 597 aa27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms