RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 C16orf71Q8IYS4 520 aaPredicted RBP23.5■■□□□ 1.35
CHMP4A-201ENST00000347519 KIF1BPQ96EK5 621 aa23.5■■□□□ 1.35
CHMP4A-201ENST00000347519 MASTLQ96GX5 879 aa23.5■■□□□ 1.35
CHMP4A-201ENST00000347519 MPHOSPH8Q99549 860 aa23.5■■□□□ 1.35
CHMP4A-201ENST00000347519 LRRCC1Q9C099 1032 aa23.5■■□□□ 1.35
CHMP4A-201ENST00000347519 FBXO3Q9UK99 471 aa23.5■■□□□ 1.35
CHMP4A-201ENST00000347519 H0YIN7 160 aa23.49■■□□□ 1.35
CHMP4A-201ENST00000347519 PPP1R1BQ9UD71 204 aaPredicted RBP23.49■■□□□ 1.35
CHMP4A-201ENST00000347519 DPEP1P16444 411 aa23.48■■□□□ 1.35
CHMP4A-201ENST00000347519 ERC1Q8IUD2 1116 aa23.48■■□□□ 1.35
CHMP4A-201ENST00000347519 ZNF622Q969S3 477 aaKnown RBP eCLIP23.48■■□□□ 1.352e-7■■■□□ 18.4
CHMP4A-201ENST00000347519 BSDC1Q9NW68 430 aaPredicted RBP23.48■■□□□ 1.35
CHMP4A-201ENST00000347519 SLX4Q8IY92 1834 aa23.48■■□□□ 1.35
CHMP4A-201ENST00000347519 A0A0G2JLW4 131 aa23.47■■□□□ 1.35
CHMP4A-201ENST00000347519 KCNA3P22001 575 aa23.47■■□□□ 1.35
CHMP4A-201ENST00000347519 STYK1Q6J9G0 422 aa23.47■■□□□ 1.35
CHMP4A-201ENST00000347519 VGLL2Q8N8G2 317 aa23.47■■□□□ 1.35
CHMP4A-201ENST00000347519 HELBQ8NG08 1087 aaPredicted RBP23.47■■□□□ 1.35
CHMP4A-201ENST00000347519 OTUD7AQ8TE49 926 aaPredicted RBP23.47■■□□□ 1.35
CHMP4A-201ENST00000347519 LRRC37AA6NMS7 1700 aa23.46■■□□□ 1.35
CHMP4A-201ENST00000347519 METTL24Q5JXM2 366 aa23.46■■□□□ 1.35
CHMP4A-201ENST00000347519 MINPP1Q9UNW1 487 aa23.46■■□□□ 1.35
CHMP4A-201ENST00000347519 KLHL34Q8N239 644 aa23.45■■□□□ 1.34
CHMP4A-201ENST00000347519 TAF5LO75529 589 aa23.44■■□□□ 1.34
CHMP4A-201ENST00000347519 CHRNDQ07001 517 aa23.44■■□□□ 1.34
CHMP4A-201ENST00000347519 EAF2Q96CJ1 260 aaPredicted RBP23.44■■□□□ 1.34
CHMP4A-201ENST00000347519 CEP126Q9P2H0 1117 aa23.44■■□□□ 1.34
CHMP4A-201ENST00000347519 BRCA1P38398 1863 aaKnown RBP23.44■■□□□ 1.34
CHMP4A-201ENST00000347519 WTIPA6NIX2 430 aaPredicted RBP23.43■■□□□ 1.34
CHMP4A-201ENST00000347519 SNAP23O00161 211 aa23.43■■□□□ 1.34
CHMP4A-201ENST00000347519 BBOX1O75936 387 aa23.43■■□□□ 1.34
CHMP4A-201ENST00000347519 CD2APQ9Y5K6 639 aa23.43■■□□□ 1.34
CHMP4A-201ENST00000347519 MROH5Q6ZUA9 1318 aa23.43■■□□□ 1.34
CHMP4A-201ENST00000347519 PPEF1O14829 653 aaPredicted RBP23.42■■□□□ 1.34
CHMP4A-201ENST00000347519 ALDH1B1P30837 517 aa23.42■■□□□ 1.34
CHMP4A-201ENST00000347519 TGFB2P61812 414 aa23.42■■□□□ 1.34
CHMP4A-201ENST00000347519 TNNI3KQ59H18 835 aa23.42■■□□□ 1.34
CHMP4A-201ENST00000347519 OLFM4Q6UX06 510 aa23.42■■□□□ 1.34
CHMP4A-201ENST00000347519 FPGT-TNNI3KV9GXZ4 949 aa23.42■■□□□ 1.34
CHMP4A-201ENST00000347519 ZNF609O15014 1411 aa23.42■■□□□ 1.34
CHMP4A-201ENST00000347519 PDE8BO95263 885 aa23.41■■□□□ 1.34
CHMP4A-201ENST00000347519 CCDC8Q9H0W5 538 aaPredicted RBP23.41■■□□□ 1.34
CHMP4A-201ENST00000347519 TLR7Q9NYK1 1049 aaKnown RBP23.41■■□□□ 1.34
CHMP4A-201ENST00000347519 SALL3Q9BXA9 1300 aa23.41■■□□□ 1.34
CHMP4A-201ENST00000347519 TIMM10P62072 90 aa23.4■■□□□ 1.34
CHMP4A-201ENST00000347519 PRPF40BQ6NWY9 871 aaKnown RBP23.4■■□□□ 1.34
CHMP4A-201ENST00000347519 AACSQ86V21 672 aa23.4■■□□□ 1.34
CHMP4A-201ENST00000347519 CLASRPQ8N2M8 674 aaKnown RBP23.4■■□□□ 1.34
CHMP4A-201ENST00000347519 GPR108Q9NPR9 543 aa23.4■■□□□ 1.34
CHMP4A-201ENST00000347519 LTBP1Q14766 1721 aa23.4■■□□□ 1.34
CHMP4A-201ENST00000347519 FGFR2P21802 821 aa23.4■■□□□ 1.34
CHMP4A-201ENST00000347519 RGS3P49796 1198 aa23.4■■□□□ 1.34
CHMP4A-201ENST00000347519 NLGN2Q8NFZ4 835 aa23.4■■□□□ 1.34
CHMP4A-201ENST00000347519 CNKSR1Q969H4 720 aa23.4■■□□□ 1.34
CHMP4A-201ENST00000347519 ZBTB47Q9UFB7 747 aaPredicted RBP23.4■■□□□ 1.34
CHMP4A-201ENST00000347519 GPSM2P81274 684 aa23.39■■□□□ 1.33
CHMP4A-201ENST00000347519 SP8Q8IXZ3 490 aa23.39■■□□□ 1.33
CHMP4A-201ENST00000347519 WWC3Q9ULE0 1092 aa23.39■■□□□ 1.33
CHMP4A-201ENST00000347519 ATP6V0A2Q9Y487 856 aa23.39■■□□□ 1.33
CHMP4A-201ENST00000347519 ARAP2Q8WZ64 1704 aa23.39■■□□□ 1.33
CHMP4A-201ENST00000347519 A0A1B0GUL7 405 aa23.38■■□□□ 1.33
CHMP4A-201ENST00000347519 ADORA1P30542 326 aa23.38■■□□□ 1.33
CHMP4A-201ENST00000347519 ATP2B3Q16720 1220 aa23.38■■□□□ 1.33
CHMP4A-201ENST00000347519 PLEKHM2Q8IWE5 1019 aa23.38■■□□□ 1.33
CHMP4A-201ENST00000347519 C7orf43Q8WVR3 580 aa23.38■■□□□ 1.33
CHMP4A-201ENST00000347519 DBNDD2Q9BQY9 259 aa23.38■■□□□ 1.33
CHMP4A-201ENST00000347519 ZNF219Q9P2Y4 722 aaPredicted RBP23.38■■□□□ 1.33
CHMP4A-201ENST00000347519 DBNLQ9UJU6 430 aaKnown RBP23.38■■□□□ 1.33
CHMP4A-201ENST00000347519 TSHZ3Q63HK5 1081 aa23.37■■□□□ 1.33
CHMP4A-201ENST00000347519 FHDC1Q9C0D6 1143 aaPredicted RBP23.37■■□□□ 1.33
CHMP4A-201ENST00000347519 DCAF8L1A6NGE4 600 aa23.36■■□□□ 1.33
CHMP4A-201ENST00000347519 IFIT2P09913 472 aaKnown RBP23.36■■□□□ 1.33
CHMP4A-201ENST00000347519 TMC4Q7Z404 712 aa23.36■■□□□ 1.33
CHMP4A-201ENST00000347519 TTLL6Q8N841 843 aa23.36■■□□□ 1.33
CHMP4A-201ENST00000347519 NEUROD6Q96NK8 337 aa23.36■■□□□ 1.33
CHMP4A-201ENST00000347519 ANKRD2Q9GZV1 360 aa23.36■■□□□ 1.33
CHMP4A-201ENST00000347519 PUM3Q15397 648 aaKnown RBP23.35■■□□□ 1.33
CHMP4A-201ENST00000347519 AKAP2Q9Y2D5 859 aa23.35■■□□□ 1.33
CHMP4A-201ENST00000347519 DUOX1Q9NRD9 1551 aa23.35■■□□□ 1.33
CHMP4A-201ENST00000347519 KLRK1P26718 216 aa23.34■■□□□ 1.33
CHMP4A-201ENST00000347519 XAGE2Q96GT9 111 aa23.34■■□□□ 1.33
CHMP4A-201ENST00000347519 GPR101Q96P66 508 aaPredicted RBP23.34■■□□□ 1.33
CHMP4A-201ENST00000347519 PIM2Q9P1W9 311 aa23.34■■□□□ 1.33
CHMP4A-201ENST00000347519 NSFL1CQ9UNZ2 370 aaKnown RBP23.34■■□□□ 1.33
CHMP4A-201ENST00000347519 SNED1Q8TER0 1413 aa23.34■■□□□ 1.33
CHMP4A-201ENST00000347519 XDHP47989 1333 aa23.33■■□□□ 1.33
CHMP4A-201ENST00000347519 PDE1AP54750 535 aa23.33■■□□□ 1.33
CHMP4A-201ENST00000347519 LPIN2Q92539 896 aa23.33■■□□□ 1.33
CHMP4A-201ENST00000347519 ANKIB1Q9P2G1 1089 aa23.33■■□□□ 1.33
CHMP4A-201ENST00000347519 IRS2Q9Y4H2 1338 aa23.32■■□□□ 1.32
CHMP4A-201ENST00000347519 C21orf2O43822 256 aa23.32■■□□□ 1.32
CHMP4A-201ENST00000347519 MX1P20591 662 aa23.32■■□□□ 1.32
CHMP4A-201ENST00000347519 UBE4AQ14139 1066 aa23.32■■□□□ 1.32
CHMP4A-201ENST00000347519 PODXL2Q9NZ53 605 aa23.32■■□□□ 1.32
CHMP4A-201ENST00000347519 STAP2Q9UGK3 403 aa23.32■■□□□ 1.32
CHMP4A-201ENST00000347519 POLLQ9UGP5 575 aa23.32■■□□□ 1.32
CHMP4A-201ENST00000347519 ZNF804BA4D1E1 1349 aa23.32■■□□□ 1.32
CHMP4A-201ENST00000347519 SLC5A1P13866 664 aa23.31■■□□□ 1.32
CHMP4A-201ENST00000347519 TXNRD3Q86VQ6 643 aa23.3■■□□□ 1.32
CHMP4A-201ENST00000347519 TBC1D16Q8TBP0 767 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms