RNA–Protein interactions for RNA: ENST00000345851.7

TRIM3-201, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM3, Length 2,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-201ENST00000345851 PHRF1Q9P1Y6 1649 aaKnown RBP25.1■■□□□ 1.61
TRIM3-201ENST00000345851 CAPN2P17655 700 aa25.1■■□□□ 1.61
TRIM3-201ENST00000345851 TAF6LQ9Y6J9 622 aa25.1■■□□□ 1.61
TRIM3-201ENST00000345851 MRFAP1L1Q96HT8 127 aa25.09■■□□□ 1.61
TRIM3-201ENST00000345851 FAM227BQ96M60 508 aa25.09■■□□□ 1.61
TRIM3-201ENST00000345851 NEMFO60524 1076 aa25.09■■□□□ 1.61
TRIM3-201ENST00000345851 PROSER3Q2NL68 480 aa25.08■■□□□ 1.61
TRIM3-201ENST00000345851 PRDM11Q9NQV5 511 aa25.08■■□□□ 1.61
TRIM3-201ENST00000345851 JAK2O60674 1132 aa25.07■■□□□ 1.6
TRIM3-201ENST00000345851 TATP17735 454 aaPredicted RBP25.07■■□□□ 1.6
TRIM3-201ENST00000345851 NFATC2IPQ8NCF5 419 aa25.07■■□□□ 1.6
TRIM3-201ENST00000345851 ERCC4Q92889 916 aaPredicted RBP25.07■■□□□ 1.6
TRIM3-201ENST00000345851 BLOC1S2Q6QNY1 142 aa25.07■■□□□ 1.6
TRIM3-201ENST00000345851 SARM1Q6SZW1 724 aa25.07■■□□□ 1.6
TRIM3-201ENST00000345851 FOSBP53539 338 aa25.07■■□□□ 1.6
TRIM3-201ENST00000345851 SLFNL1Q499Z3 407 aa25.07■■□□□ 1.6
TRIM3-201ENST00000345851 MEGF6O75095 1541 aa25.06■■□□□ 1.6
TRIM3-201ENST00000345851 BMS1Q14692 1282 aaKnown RBP25.06■■□□□ 1.6
TRIM3-201ENST00000345851 SLC27A2O14975 620 aa25.06■■□□□ 1.6
TRIM3-201ENST00000345851 HNRNPH2P55795 449 aaKnown RBP25.06■■□□□ 1.6
TRIM3-201ENST00000345851 SNW1Q13573 536 aaKnown RBP25.05■■□□□ 1.6
TRIM3-201ENST00000345851 IPO4Q8TEX9 1081 aaKnown RBP25.05■■□□□ 1.6
TRIM3-201ENST00000345851 PI4KAP2A4QPH2 592 aa25.05■■□□□ 1.6
TRIM3-201ENST00000345851 PIP4K2AP48426 406 aaPredicted RBP25.05■■□□□ 1.6
TRIM3-201ENST00000345851 CLCN6P51797 869 aa25.05■■□□□ 1.6
TRIM3-201ENST00000345851 GORABQ5T7V8 394 aa25.05■■□□□ 1.6
TRIM3-201ENST00000345851 SYT10Q6XYQ8 523 aa25.05■■□□□ 1.6
TRIM3-201ENST00000345851 PI4KAP1Q8N8J0 262 aa25.05■■□□□ 1.6
TRIM3-201ENST00000345851 KCNB2Q92953 911 aa25.05■■□□□ 1.6
TRIM3-201ENST00000345851 STRN4Q9NRL3 753 aa25.05■■□□□ 1.6
TRIM3-201ENST00000345851 BABAM1Q9NWV8 329 aa25.05■■□□□ 1.6
TRIM3-201ENST00000345851 CLASRPQ8N2M8 674 aaKnown RBP25.04■■□□□ 1.6
TRIM3-201ENST00000345851 FAM208AQ9UK61 1670 aaKnown RBP25.04■■□□□ 1.6
TRIM3-201ENST00000345851 CYP2C19P33261 490 aa25.04■■□□□ 1.6
TRIM3-201ENST00000345851 NMIQ13287 307 aaPredicted RBP25.04■■□□□ 1.6
TRIM3-201ENST00000345851 STX1AQ16623 288 aa25.04■■□□□ 1.6
TRIM3-201ENST00000345851 BRF1Q92994 677 aa25.04■■□□□ 1.6
TRIM3-201ENST00000345851 FTOQ9C0B1 505 aaKnown RBP eCLIP25.04■■□□□ 1.6
TRIM3-201ENST00000345851 FHOD1Q9Y613 1164 aa25.04■■□□□ 1.6
TRIM3-201ENST00000345851 PSMA5P28066 241 aa25.03■■□□□ 1.6
TRIM3-201ENST00000345851 ECHDC1Q9NTX5 307 aa25.03■■□□□ 1.6
TRIM3-201ENST00000345851 TTC41PQ6P2S7 1318 aa25.03■■□□□ 1.6
TRIM3-201ENST00000345851 NCAPD2Q15021 1401 aa25.03■■□□□ 1.6
TRIM3-201ENST00000345851 DNAJC2Q99543 621 aaKnown RBP25.03■■□□□ 1.6
TRIM3-201ENST00000345851 POLR3GO15318 223 aaPredicted RBP25.03■■□□□ 1.6
TRIM3-201ENST00000345851 CYP27B1O15528 508 aa25.03■■□□□ 1.6
TRIM3-201ENST00000345851 PHKG2P15735 406 aa25.03■■□□□ 1.6
TRIM3-201ENST00000345851 H2AFXP16104 143 aaPredicted RBP25.03■■□□□ 1.6
TRIM3-201ENST00000345851 TOB2Q14106 344 aaPredicted RBP25.03■■□□□ 1.6
TRIM3-201ENST00000345851 H3BQV1 296 aa25.02■■□□□ 1.6
TRIM3-201ENST00000345851 GIGYF1O75420 1035 aaPredicted RBP25.02■■□□□ 1.6
TRIM3-201ENST00000345851 CAVIN2O95810 425 aa25.02■■□□□ 1.6
TRIM3-201ENST00000345851 AIMP1Q12904 312 aaKnown RBP25.02■■□□□ 1.6
TRIM3-201ENST00000345851 IFFO2Q5TF58 517 aa25.02■■□□□ 1.6
TRIM3-201ENST00000345851 TOM1L2Q6ZVM7 507 aa25.02■■□□□ 1.6
TRIM3-201ENST00000345851 AOPEPQ8N6M6 819 aa25.02■■□□□ 1.6
TRIM3-201ENST00000345851 PA2G4Q9UQ80 394 aaKnown RBP25.02■■□□□ 1.6
TRIM3-201ENST00000345851 IFIT2P09913 472 aaKnown RBP25.02■■□□□ 1.6
TRIM3-201ENST00000345851 ARHGAP29Q52LW3 1261 aa25.02■■□□□ 1.6
TRIM3-201ENST00000345851 LMO7Q8WWI1 1683 aa25.01■■□□□ 1.59
TRIM3-201ENST00000345851 DHX40Q8IX18 779 aaKnown RBP25.01■■□□□ 1.59
TRIM3-201ENST00000345851 MAP4K1Q92918 833 aa25.01■■□□□ 1.59
TRIM3-201ENST00000345851 TRIM34Q9BYJ4 488 aa25.01■■□□□ 1.59
TRIM3-201ENST00000345851 TULP2O00295 520 aa25.01■■□□□ 1.59
TRIM3-201ENST00000345851 PNMA6AP0CW24 399 aaPredicted RBP25.01■■□□□ 1.59
TRIM3-201ENST00000345851 CCAR1Q8IX12 1150 aaKnown RBP25.01■■□□□ 1.59
TRIM3-201ENST00000345851 PDIA4P13667 645 aaKnown RBP25■■□□□ 1.59
TRIM3-201ENST00000345851 E4F1Q66K89 784 aaPredicted RBP25■■□□□ 1.59
TRIM3-201ENST00000345851 RPS6KB1P23443 525 aa25■■□□□ 1.59
TRIM3-201ENST00000345851 RESTQ13127 1097 aa25■■□□□ 1.59
TRIM3-201ENST00000345851 NEK11Q8NG66 645 aa25■■□□□ 1.59
TRIM3-201ENST00000345851 ADCY9O60503 1353 aa25■■□□□ 1.59
TRIM3-201ENST00000345851 GOLPH3LQ9H4A5 285 aa24.99■■□□□ 1.59
TRIM3-201ENST00000345851 PLA2G4AP47712 749 aa24.99■■□□□ 1.59
TRIM3-201ENST00000345851 ANKRD1Q15327 319 aa24.99■■□□□ 1.59
TRIM3-201ENST00000345851 HSP90AB4PQ58FF6 505 aa24.99■■□□□ 1.59
TRIM3-201ENST00000345851 RNF20Q5VTR2 975 aa24.99■■□□□ 1.59
TRIM3-201ENST00000345851 KDM6AO15550 1401 aaPredicted RBP24.99■■□□□ 1.59
TRIM3-201ENST00000345851 A0A0D9SFI3 127 aa24.99■■□□□ 1.59
TRIM3-201ENST00000345851 AACSQ86V21 672 aa24.99■■□□□ 1.59
TRIM3-201ENST00000345851 EVI5LQ96CN4 794 aa24.99■■□□□ 1.59
TRIM3-201ENST00000345851 PPP1R13BQ96KQ4 1090 aa24.99■■□□□ 1.59
TRIM3-201ENST00000345851 COL18A1P39060 1754 aa24.98■■□□□ 1.59
TRIM3-201ENST00000345851 USP42Q9H9J4 1324 aaKnown RBP24.98■■□□□ 1.59
TRIM3-201ENST00000345851 SOS2Q07890 1332 aaPredicted RBP24.97■■□□□ 1.59
TRIM3-201ENST00000345851 KIF2AO00139 706 aaPredicted RBP24.97■■□□□ 1.59
TRIM3-201ENST00000345851 MYL6BP14649 208 aa24.97■■□□□ 1.59
TRIM3-201ENST00000345851 GPATCH3Q96I76 525 aa24.97■■□□□ 1.59
TRIM3-201ENST00000345851 L2HGDHQ9H9P8 463 aa24.97■■□□□ 1.59
TRIM3-201ENST00000345851 ZKSCAN7Q9P0L1 754 aaPredicted RBP24.97■■□□□ 1.59
TRIM3-201ENST00000345851 ZNF790Q6PG37 636 aa24.97■■□□□ 1.59
TRIM3-201ENST00000345851 IFNL2Q8IZJ0 200 aa24.97■■□□□ 1.59
TRIM3-201ENST00000345851 SLC52A2Q9HAB3 445 aa24.97■■□□□ 1.59
TRIM3-201ENST00000345851 KDM3BQ7LBC6 1761 aa24.97■■□□□ 1.59
TRIM3-201ENST00000345851 HSP90B1P14625 803 aaKnown RBP24.96■■□□□ 1.59
TRIM3-201ENST00000345851 NBPF11Q86T75 865 aa24.96■■□□□ 1.59
TRIM3-201ENST00000345851 PPFIA3O75145 1194 aa24.96■■□□□ 1.59
TRIM3-201ENST00000345851 HOMER1Q86YM7 354 aa24.96■■□□□ 1.59
TRIM3-201ENST00000345851 CFAP45Q9UL16 551 aa24.96■■□□□ 1.59
TRIM3-201ENST00000345851 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms