RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 DUOX1Q9NRD9 1551 aa22.91■■□□□ 1.26
USF2-202ENST00000343550 TRAF5O00463 557 aa22.91■■□□□ 1.26
USF2-202ENST00000343550 FOXN1O15353 648 aa22.91■■□□□ 1.26
USF2-202ENST00000343550 GPSM2P81274 684 aa22.91■■□□□ 1.26
USF2-202ENST00000343550 JARID2Q92833 1246 aaPredicted RBP22.91■■□□□ 1.26
USF2-202ENST00000343550 POLLQ9UGP5 575 aa22.91■■□□□ 1.26
USF2-202ENST00000343550 C6orf229H3BNL8 230 aa22.9■■□□□ 1.26
USF2-202ENST00000343550 CST9Q5W186 159 aa22.9■■□□□ 1.26
USF2-202ENST00000343550 LINS1Q8NG48 757 aa22.9■■□□□ 1.26
USF2-202ENST00000343550 ZBED9Q6R2W3 1325 aa22.9■■□□□ 1.26
USF2-202ENST00000343550 LRRC37AA6NMS7 1700 aa22.9■■□□□ 1.26
USF2-202ENST00000343550 RIMBP2O15034 1052 aa22.89■■□□□ 1.26
USF2-202ENST00000343550 AIDAQ96BJ3 306 aa22.89■■□□□ 1.26
USF2-202ENST00000343550 WDR33Q9C0J8 1336 aaKnown RBP22.89■■□□□ 1.25
USF2-202ENST00000343550 DBNDD1Q9H9R9 158 aa22.88■■□□□ 1.25
USF2-202ENST00000343550 SEC31BQ9NQW1 1179 aa22.88■■□□□ 1.25
USF2-202ENST00000343550 WBP1LQ9NX94 342 aa22.88■■□□□ 1.25
USF2-202ENST00000343550 PGAP2Q9UHJ9 254 aa22.88■■□□□ 1.25
USF2-202ENST00000343550 CNOT7Q9UIV1 285 aaKnown RBP22.88■■□□□ 1.25
USF2-202ENST00000343550 HIRAP54198 1017 aaPredicted RBP22.87■■□□□ 1.25
USF2-202ENST00000343550 GCKRQ14397 625 aa22.87■■□□□ 1.25
USF2-202ENST00000343550 BEND3Q5T5X7 828 aa22.87■■□□□ 1.25
USF2-202ENST00000343550 ZC3H15Q8WU90 426 aaKnown RBP22.87■■□□□ 1.25
USF2-202ENST00000343550 EYA3Q99504 573 aa22.87■■□□□ 1.25
USF2-202ENST00000343550 COL4A1P02462 1669 aa22.87■■□□□ 1.25
USF2-202ENST00000343550 H7C1D1 291 aa22.87■■□□□ 1.25
USF2-202ENST00000343550 H7C1W4 665 aa22.87■■□□□ 1.25
USF2-202ENST00000343550 CAPN15O75808 1086 aa22.87■■□□□ 1.25
USF2-202ENST00000343550 TBC1D16Q8TBP0 767 aa22.87■■□□□ 1.25
USF2-202ENST00000343550 PSMD14O00487 310 aa22.86■■□□□ 1.25
USF2-202ENST00000343550 PDE8AO60658 829 aa22.86■■□□□ 1.25
USF2-202ENST00000343550 CTCFP49711 727 aaPredicted RBP22.86■■□□□ 1.25
USF2-202ENST00000343550 CCDC152Q4G0S7 254 aa22.86■■□□□ 1.25
USF2-202ENST00000343550 SMC4Q9NTJ3 1288 aa22.86■■□□□ 1.25
USF2-202ENST00000343550 ZBTB12Q9Y330 459 aaPredicted RBP22.86■■□□□ 1.25
USF2-202ENST00000343550 PTPRCP08575 1304 aa22.86■■□□□ 1.25
USF2-202ENST00000343550 SHTN1A0MZ66 631 aa22.85■■□□□ 1.25
USF2-202ENST00000343550 RARSP54136 660 aaKnown RBP22.85■■□□□ 1.25
USF2-202ENST00000343550 MICALL2Q8IY33 904 aa22.85■■□□□ 1.25
USF2-202ENST00000343550 TRPM4Q8TD43 1214 aa22.85■■□□□ 1.25
USF2-202ENST00000343550 DPF2Q92785 391 aa22.85■■□□□ 1.25
USF2-202ENST00000343550 GLIS2Q9BZE0 524 aaPredicted RBP22.85■■□□□ 1.25
USF2-202ENST00000343550 PODXL2Q9NZ53 605 aa22.85■■□□□ 1.25
USF2-202ENST00000343550 ECE2O60344 883 aa22.84■■□□□ 1.25
USF2-202ENST00000343550 BRPF1P55201 1214 aaPredicted RBP22.84■■□□□ 1.25
USF2-202ENST00000343550 MAP2K1Q02750 393 aaPredicted RBP22.84■■□□□ 1.25
USF2-202ENST00000343550 DOK7Q18PE1 504 aa22.84■■□□□ 1.25
USF2-202ENST00000343550 SLC4A10Q6U841 1118 aa22.84■■□□□ 1.25
USF2-202ENST00000343550 GPR101Q96P66 508 aaPredicted RBP22.84■■□□□ 1.25
USF2-202ENST00000343550 PRDM10Q9NQV6 1147 aa22.84■■□□□ 1.25
USF2-202ENST00000343550 TLL2Q9Y6L7 1015 aa22.84■■□□□ 1.25
USF2-202ENST00000343550 ECE1P42892 770 aa22.83■■□□□ 1.25
USF2-202ENST00000343550 PAXIP1Q6ZW49 1069 aaPredicted RBP22.83■■□□□ 1.25
USF2-202ENST00000343550 CAPNS2Q96L46 248 aa22.83■■□□□ 1.25
USF2-202ENST00000343550 CCDC85AQ96PX6 553 aaPredicted RBP22.83■■□□□ 1.25
USF2-202ENST00000343550 ZC3H12CQ9C0D7 883 aaKnown RBP22.83■■□□□ 1.25
USF2-202ENST00000343550 KCNQ5Q9NR82 932 aa22.83■■□□□ 1.25
USF2-202ENST00000343550 ANKIB1Q9P2G1 1089 aa22.83■■□□□ 1.25
USF2-202ENST00000343550 CELF2O95319 508 aaKnown RBP22.82■■□□□ 1.24
USF2-202ENST00000343550 CDC37L1Q7L3B6 337 aa22.82■■□□□ 1.24
USF2-202ENST00000343550 UBE3BQ7Z3V4 1068 aa22.82■■□□□ 1.24
USF2-202ENST00000343550 CASP7P55210 303 aa22.82■■□□□ 1.24
USF2-202ENST00000343550 CYP4F22Q6NT55 531 aa22.82■■□□□ 1.24
USF2-202ENST00000343550 UFL1O94874 794 aa22.81■■□□□ 1.24
USF2-202ENST00000343550 RPS12P25398 132 aaKnown RBP22.81■■□□□ 1.24
USF2-202ENST00000343550 GRM1Q13255 1194 aa22.81■■□□□ 1.24
USF2-202ENST00000343550 SAMD7Q7Z3H4 446 aa22.81■■□□□ 1.24
USF2-202ENST00000343550 SAPCD2Q86UD0 394 aa22.81■■□□□ 1.24
USF2-202ENST00000343550 SRCIN1Q9C0H9 1055 aa22.81■■□□□ 1.24
USF2-202ENST00000343550 GGA1Q9UJY5 639 aa22.81■■□□□ 1.24
USF2-202ENST00000343550 NOB1Q9ULX3 412 aaKnown RBP22.81■■□□□ 1.24
USF2-202ENST00000343550 RTL9Q8NET4 1388 aa22.8■■□□□ 1.24
USF2-202ENST00000343550 ALDH1L1O75891 902 aa22.8■■□□□ 1.24
USF2-202ENST00000343550 LBX1P52954 281 aa22.8■■□□□ 1.24
USF2-202ENST00000343550 ANKRD18AQ8IVF6 992 aa22.8■■□□□ 1.24
USF2-202ENST00000343550 TRPM7Q96QT4 1865 aa22.8■■□□□ 1.24
USF2-202ENST00000343550 G3V3G9 751 aa22.79■■□□□ 1.24
USF2-202ENST00000343550 DCAF8Q5TAQ9 597 aa22.79■■□□□ 1.24
USF2-202ENST00000343550 TTLL11Q8NHH1 800 aa22.79■■□□□ 1.24
USF2-202ENST00000343550 TBC1D10BQ4KMP7 808 aaPredicted RBP22.78■■□□□ 1.24
USF2-202ENST00000343550 PLA2G12BQ9BX93 195 aa22.78■■□□□ 1.24
USF2-202ENST00000343550 ZNF408Q9H9D4 720 aa22.78■■□□□ 1.24
USF2-202ENST00000343550 VIL1P09327 827 aaKnown RBP22.77■■□□□ 1.24
USF2-202ENST00000343550 CTSWP56202 376 aa22.77■■□□□ 1.24
USF2-202ENST00000343550 USP48Q86UV5 1035 aa22.77■■□□□ 1.24
USF2-202ENST00000343550 XDHP47989 1333 aa22.77■■□□□ 1.24
USF2-202ENST00000343550 GRM8O00222 908 aa22.77■■□□□ 1.24
USF2-202ENST00000343550 EGFRP00533 1210 aa22.77■■□□□ 1.24
USF2-202ENST00000343550 HSPA8P11142 646 aaKnown RBP22.77■■□□□ 1.24
USF2-202ENST00000343550 RBM26Q5T8P6 1007 aaKnown RBP22.77■■□□□ 1.24
USF2-202ENST00000343550 CDC5LQ99459 802 aaKnown RBP22.77■■□□□ 1.24
USF2-202ENST00000343550 BCAR3O75815 825 aa22.76■■□□□ 1.23
USF2-202ENST00000343550 HHIPL1Q96JK4 782 aa22.76■■□□□ 1.23
USF2-202ENST00000343550 C9orf78Q9NZ63 289 aaPredicted RBP22.76■■□□□ 1.23
USF2-202ENST00000343550 MAP2K2P36507 400 aa22.75■■□□□ 1.23
USF2-202ENST00000343550 ARHGAP45Q92619 1136 aa22.75■■□□□ 1.23
USF2-202ENST00000343550 BEGAINQ9BUH8 593 aa22.75■■□□□ 1.23
USF2-202ENST00000343550 CSF1RP07333 972 aa22.74■■□□□ 1.23
USF2-202ENST00000343550 ATP2B4P23634 1241 aa22.74■■□□□ 1.23
USF2-202ENST00000343550 KRT26Q7Z3Y9 468 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms