RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 SKILP12757 684 aa9.27□□□□□ -0.93
UBE4B-202ENST00000343090 SYT1P21579 422 aa9.27□□□□□ -0.93
UBE4B-202ENST00000343090 HOXC9P31274 260 aa9.27□□□□□ -0.93
UBE4B-202ENST00000343090 KRBA2Q6ZNG9 492 aa9.27□□□□□ -0.93
UBE4B-202ENST00000343090 ZBTB9Q96C00 473 aa9.27□□□□□ -0.93
UBE4B-202ENST00000343090 PAG1Q9NWQ8 432 aa9.27□□□□□ -0.93
UBE4B-202ENST00000343090 MAST1Q9Y2H9 1570 aa9.27□□□□□ -0.93
UBE4B-202ENST00000343090 ADGRL2O95490 1459 aa9.27□□□□□ -0.93
UBE4B-202ENST00000343090 KDM6BO15054 1643 aa9.27□□□□□ -0.93
UBE4B-202ENST00000343090 RXRAP19793 462 aa9.27□□□□□ -0.93
UBE4B-202ENST00000343090 ATP2B3Q16720 1220 aa9.27□□□□□ -0.93
UBE4B-202ENST00000343090 SPATA31E1Q6ZUB1 1445 aa9.27□□□□□ -0.93
UBE4B-202ENST00000343090 PNMA6EA0A0J9YXQ4 647 aa9.27□□□□□ -0.93
UBE4B-202ENST00000343090 ERLIN2O94905 339 aa9.27□□□□□ -0.93
UBE4B-202ENST00000343090 TTC31Q49AM3 519 aaPredicted RBP9.27□□□□□ -0.93
UBE4B-202ENST00000343090 CCDC129Q6ZRS4 1044 aa9.27□□□□□ -0.93
UBE4B-202ENST00000343090 TAX1BP1Q86VP1 789 aa9.27□□□□□ -0.93
UBE4B-202ENST00000343090 TTC41PQ6P2S7 1318 aa9.27□□□□□ -0.93
UBE4B-202ENST00000343090 DCAF8L1A6NGE4 600 aa9.26□□□□□ -0.93
UBE4B-202ENST00000343090 ZBTB43O43298 467 aa9.26□□□□□ -0.93
UBE4B-202ENST00000343090 CCDC96Q2M329 555 aa9.26□□□□□ -0.93
UBE4B-202ENST00000343090 FKBP15Q5T1M5 1219 aa9.26□□□□□ -0.93
UBE4B-202ENST00000343090 SLC9C2Q5TAH2 1124 aa9.26□□□□□ -0.93
UBE4B-202ENST00000343090 FAM173BQ6P4H8 233 aa9.26□□□□□ -0.93
UBE4B-202ENST00000343090 CTR9Q6PD62 1173 aa9.26□□□□□ -0.93
UBE4B-202ENST00000343090 RUFY3Q7L099 469 aa9.26□□□□□ -0.93
UBE4B-202ENST00000343090 CACNA2D4Q7Z3S7 1137 aa9.26□□□□□ -0.93
UBE4B-202ENST00000343090 MRPS27Q92552 414 aaKnown RBP9.26□□□□□ -0.93
UBE4B-202ENST00000343090 TMEM63CQ9P1W3 806 aa9.26□□□□□ -0.93
UBE4B-202ENST00000343090 TSPY2A6NKD2 308 aa9.26□□□□□ -0.93
UBE4B-202ENST00000343090 PRC1O43663 620 aa9.26□□□□□ -0.93
UBE4B-202ENST00000343090 IQCEQ6IPM2 695 aa9.26□□□□□ -0.93
UBE4B-202ENST00000343090 LUZP1Q86V48 1076 aa9.26□□□□□ -0.93
UBE4B-202ENST00000343090 HELBQ8NG08 1087 aaPredicted RBP9.26□□□□□ -0.93
UBE4B-202ENST00000343090 TAF4BQ92750 862 aa9.26□□□□□ -0.93
UBE4B-202ENST00000343090 KIF21AQ7Z4S6 1674 aa9.26□□□□□ -0.93
UBE4B-202ENST00000343090 UBASH3AP57075 661 aa9.26□□□□□ -0.93
UBE4B-202ENST00000343090 GNG11P61952 73 aa9.26□□□□□ -0.93
UBE4B-202ENST00000343090 CRACR2AQ9BSW2 395 aa9.26□□□□□ -0.93
UBE4B-202ENST00000343090 NPC1L1Q9UHC9 1359 aa9.26□□□□□ -0.93
UBE4B-202ENST00000343090 MNAT1P51948 309 aa9.26□□□□□ -0.93
UBE4B-202ENST00000343090 JAKMIP3Q5VZ66 844 aa9.26□□□□□ -0.93
UBE4B-202ENST00000343090 CRACR2BQ8N4Y2 399 aaPredicted RBP9.26□□□□□ -0.93
UBE4B-202ENST00000343090 ZCRB1Q8TBF4 217 aaKnown RBP9.26□□□□□ -0.93
UBE4B-202ENST00000343090 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.26□□□□□ -0.935e-6■■■■■ 31.1
UBE4B-202ENST00000343090 WTAPQ15007 396 aa9.25□□□□□ -0.93
UBE4B-202ENST00000343090 RSPH14Q9UHP6 348 aa9.25□□□□□ -0.93
UBE4B-202ENST00000343090 IDEP14735 1019 aa9.25□□□□□ -0.93
UBE4B-202ENST00000343090 LMOD1P29536 600 aaPredicted RBP9.25□□□□□ -0.93
UBE4B-202ENST00000343090 ZNF219Q9P2Y4 722 aaPredicted RBP9.25□□□□□ -0.93
UBE4B-202ENST00000343090 NDUFB9Q9Y6M9 179 aa9.25□□□□□ -0.93
UBE4B-202ENST00000343090 SLC4A4Q9Y6R1 1079 aa9.25□□□□□ -0.93
UBE4B-202ENST00000343090 EIF4G3O43432 1585 aaKnown RBP9.25□□□□□ -0.93
UBE4B-202ENST00000343090 PTPDC1A2A3K4 754 aa9.25□□□□□ -0.93
UBE4B-202ENST00000343090 IL15P40933 162 aaPredicted RBP9.25□□□□□ -0.93
UBE4B-202ENST00000343090 MTIF2P46199 727 aaKnown RBP9.25□□□□□ -0.93
UBE4B-202ENST00000343090 YEATS4O95619 227 aa9.25□□□□□ -0.93
UBE4B-202ENST00000343090 CYP7A1P22680 504 aa9.25□□□□□ -0.93
UBE4B-202ENST00000343090 TDRD12Q587J7 1177 aaKnown RBP9.25□□□□□ -0.93
UBE4B-202ENST00000343090 ACSBG1Q96GR2 724 aa9.25□□□□□ -0.93
UBE4B-202ENST00000343090 ZNF287Q9HBT7 754 aa9.25□□□□□ -0.93
UBE4B-202ENST00000343090 LGR6Q9HBX8 967 aa9.25□□□□□ -0.93
UBE4B-202ENST00000343090 RNF216Q9NWF9 866 aaPredicted RBP9.25□□□□□ -0.93
UBE4B-202ENST00000343090 PTPRTO14522 1441 aa9.25□□□□□ -0.93
UBE4B-202ENST00000343090 USP19O94966 1318 aa9.25□□□□□ -0.93
UBE4B-202ENST00000343090 IVLP07476 585 aa9.25□□□□□ -0.93
UBE4B-202ENST00000343090 CCDC12Q8WUD4 166 aaPredicted RBP9.25□□□□□ -0.93
UBE4B-202ENST00000343090 INTS4Q96HW7 963 aaKnown RBP9.25□□□□□ -0.93
UBE4B-202ENST00000343090 RNMTO43148 476 aaKnown RBP9.24□□□□□ -0.93
UBE4B-202ENST00000343090 TRMT1LQ7Z2T5 733 aaKnown RBP9.24□□□□□ -0.93
UBE4B-202ENST00000343090 FAM227BQ96M60 508 aa9.24□□□□□ -0.93
UBE4B-202ENST00000343090 CHL1O00533 1208 aa9.24□□□□□ -0.93
UBE4B-202ENST00000343090 KCNA6P17658 529 aa9.24□□□□□ -0.93
UBE4B-202ENST00000343090 LIG1P18858 919 aa9.24□□□□□ -0.93
UBE4B-202ENST00000343090 KCNG4Q8TDN1 519 aa9.24□□□□□ -0.93
UBE4B-202ENST00000343090 KAT14Q9H8E8 782 aa9.24□□□□□ -0.93
UBE4B-202ENST00000343090 DNAI1Q9UI46 699 aa9.24□□□□□ -0.93
UBE4B-202ENST00000343090 SNX14Q9Y5W7 946 aa9.24□□□□□ -0.93
UBE4B-202ENST00000343090 RTL1A6NKG5 1358 aa9.24□□□□□ -0.93
UBE4B-202ENST00000343090 NBPF7P0C2Y1 421 aaPredicted RBP9.24□□□□□ -0.93
UBE4B-202ENST00000343090 NEFHP12036 1026 aa9.24□□□□□ -0.93
UBE4B-202ENST00000343090 CCDC150Q8NCX0 1101 aa9.24□□□□□ -0.93
UBE4B-202ENST00000343090 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.24□□□□□ -0.93
UBE4B-202ENST00000343090 TEX13AQ9BXU3 409 aaPredicted RBP9.24□□□□□ -0.93
UBE4B-202ENST00000343090 RNF113AO15541 343 aaKnown RBP9.24□□□□□ -0.93
UBE4B-202ENST00000343090 GADD45BO75293 160 aaPredicted RBP9.24□□□□□ -0.93
UBE4B-202ENST00000343090 GCP02774 474 aa9.24□□□□□ -0.93
UBE4B-202ENST00000343090 CDC5LQ99459 802 aaKnown RBP9.24□□□□□ -0.93
UBE4B-202ENST00000343090 TSG101Q99816 390 aa9.24□□□□□ -0.93
UBE4B-202ENST00000343090 N4BP3O15049 544 aa9.23□□□□□ -0.93
UBE4B-202ENST00000343090 SPTLC2O15270 562 aa9.23□□□□□ -0.93
UBE4B-202ENST00000343090 UQCRFS1P1P0C7P4 283 aa9.23□□□□□ -0.93
UBE4B-202ENST00000343090 SSR1P43307 286 aaKnown RBP9.23□□□□□ -0.93
UBE4B-202ENST00000343090 TIMM10P62072 90 aa9.23□□□□□ -0.93
UBE4B-202ENST00000343090 ELF2Q15723 593 aa9.23□□□□□ -0.93
UBE4B-202ENST00000343090 RTN1Q16799 776 aa9.23□□□□□ -0.93
UBE4B-202ENST00000343090 MIGA1Q8NAN2 632 aa9.23□□□□□ -0.93
UBE4B-202ENST00000343090 MAGI2Q86UL8 1455 aa9.23□□□□□ -0.93
UBE4B-202ENST00000343090 CAVIN2O95810 425 aa9.23□□□□□ -0.93
UBE4B-202ENST00000343090 ZFYP08048 801 aaPredicted RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms