RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 SMARCE1Q969G3 411 aa18.03■□□□□ 0.48
LIMK2-203ENST00000340552 RILPL2Q969X0 211 aa18.03■□□□□ 0.48
LIMK2-203ENST00000340552 MRC1P22897 1456 aa18.03■□□□□ 0.48
LIMK2-203ENST00000340552 SKILP12757 684 aa18.02■□□□□ 0.48
LIMK2-203ENST00000340552 TEX35Q5T0J7 233 aa18.02■□□□□ 0.48
LIMK2-203ENST00000340552 LARP1Q6PKG0 1096 aaKnown RBP18.02■□□□□ 0.48
LIMK2-203ENST00000340552 TTC6Q86TZ1 520 aa18.02■□□□□ 0.48
LIMK2-203ENST00000340552 SALL3Q9BXA9 1300 aa18.02■□□□□ 0.48
LIMK2-203ENST00000340552 AK2P54819 239 aa18.02■□□□□ 0.48
LIMK2-203ENST00000340552 RUFY3Q7L099 469 aa18.02■□□□□ 0.48
LIMK2-203ENST00000340552 TTC14Q96N46 770 aa18.02■□□□□ 0.48
LIMK2-203ENST00000340552 LRRFIP2Q9Y608 721 aaKnown RBP18.02■□□□□ 0.48
LIMK2-203ENST00000340552 PCDH11XQ9BZA7 1347 aa18.02■□□□□ 0.47
LIMK2-203ENST00000340552 PCDH11YQ9BZA8 1340 aa18.02■□□□□ 0.47
LIMK2-203ENST00000340552 UBTFL1P0CB47 393 aaPredicted RBP18.02■□□□□ 0.47
LIMK2-203ENST00000340552 IL2RBP14784 551 aa18.02■□□□□ 0.47
LIMK2-203ENST00000340552 CABP4P57796 275 aa18.02■□□□□ 0.47
LIMK2-203ENST00000340552 TNMDQ9H2S6 317 aa18.02■□□□□ 0.47
LIMK2-203ENST00000340552 ROBO1Q9Y6N7 1651 aa18.02■□□□□ 0.47
LIMK2-203ENST00000340552 ADCY9O60503 1353 aa18.01■□□□□ 0.47
LIMK2-203ENST00000340552 ZRANB2O95218 330 aaKnown RBP eCLIP18.01■□□□□ 0.47
LIMK2-203ENST00000340552 CDC25BP30305 580 aa18.01■□□□□ 0.47
LIMK2-203ENST00000340552 CASQ1P31415 396 aa18.01■□□□□ 0.47
LIMK2-203ENST00000340552 HSPA4P34932 840 aa18.01■□□□□ 0.47
LIMK2-203ENST00000340552 GTF2A1P52655 376 aaPredicted RBP18.01■□□□□ 0.47
LIMK2-203ENST00000340552 TTC5Q8N0Z6 440 aa18.01■□□□□ 0.47
LIMK2-203ENST00000340552 CCAR2Q8N163 923 aaKnown RBP18.01■□□□□ 0.47
LIMK2-203ENST00000340552 ZNF496Q96IT1 587 aaPredicted RBP18.01■□□□□ 0.47
LIMK2-203ENST00000340552 LOC102724159A0A0B4J2E5 919 aa18.01■□□□□ 0.47
LIMK2-203ENST00000340552 LARGE1O95461 756 aa18.01■□□□□ 0.47
LIMK2-203ENST00000340552 PWP2Q15269 919 aaKnown RBP18.01■□□□□ 0.47
LIMK2-203ENST00000340552 BEND3Q5T5X7 828 aa18.01■□□□□ 0.47
LIMK2-203ENST00000340552 ATG3Q9NT62 314 aa18.01■□□□□ 0.47
LIMK2-203ENST00000340552 HYPKQ9NX55 129 aa18.01■□□□□ 0.47
LIMK2-203ENST00000340552 ZNF165P49910 485 aa18■□□□□ 0.47
LIMK2-203ENST00000340552 MMP14P50281 582 aa18■□□□□ 0.47
LIMK2-203ENST00000340552 CCZ1BP86790 482 aa18■□□□□ 0.47
LIMK2-203ENST00000340552 CCZ1P86791 482 aaPredicted RBP18■□□□□ 0.47
LIMK2-203ENST00000340552 CCDC191Q8NCU4 936 aa18■□□□□ 0.47
LIMK2-203ENST00000340552 DNAJC25Q9H1X3 360 aa18■□□□□ 0.47
LIMK2-203ENST00000340552 DDX21Q9NR30 783 aaKnown RBP eCLIP18■□□□□ 0.47
LIMK2-203ENST00000340552 C5P01031 1676 aa18■□□□□ 0.47
LIMK2-203ENST00000340552 GJB2P29033 226 aa18■□□□□ 0.47
LIMK2-203ENST00000340552 ATP8B2P98198 1209 aa18■□□□□ 0.47
LIMK2-203ENST00000340552 UNC5CLQ8IV45 518 aa18■□□□□ 0.47
LIMK2-203ENST00000340552 L2HGDHQ9H9P8 463 aa18■□□□□ 0.47
LIMK2-203ENST00000340552 DACT1Q9NYF0 836 aa18■□□□□ 0.47
LIMK2-203ENST00000340552 TPM4P67936 248 aa17.99■□□□□ 0.47
LIMK2-203ENST00000340552 ZSCAN26Q16670 478 aa17.99■□□□□ 0.47
LIMK2-203ENST00000340552 PNMA6EA0A0J9YXQ4 647 aa17.99■□□□□ 0.47
LIMK2-203ENST00000340552 ARHGAP29Q52LW3 1261 aa17.99■□□□□ 0.47
LIMK2-203ENST00000340552 ICE2Q659A1 982 aa17.99■□□□□ 0.47
LIMK2-203ENST00000340552 LIMCH1Q9UPQ0 1083 aa17.99■□□□□ 0.47
LIMK2-203ENST00000340552 PDIA6Q15084 440 aa17.98■□□□□ 0.47
LIMK2-203ENST00000340552 KSR2Q6VAB6 950 aa17.98■□□□□ 0.47
LIMK2-203ENST00000340552 MAP3K2Q9Y2U5 619 aa17.98■□□□□ 0.47
LIMK2-203ENST00000340552 VPS37CA5D8V6 355 aaPredicted RBP17.98■□□□□ 0.47
LIMK2-203ENST00000340552 CCDC69A6NI79 296 aa17.98■□□□□ 0.47
LIMK2-203ENST00000340552 NEMFO60524 1076 aa17.98■□□□□ 0.47
LIMK2-203ENST00000340552 ZCCHC17Q9NP64 241 aaKnown RBP17.98■□□□□ 0.47
LIMK2-203ENST00000340552 PSEN1P49768 467 aa17.97■□□□□ 0.47
LIMK2-203ENST00000340552 BTG4Q9NY30 223 aa17.97■□□□□ 0.47
LIMK2-203ENST00000340552 LTBP4Q8N2S1 1624 aa17.97■□□□□ 0.47
LIMK2-203ENST00000340552 SNRPA1P09661 255 aaKnown RBP17.97■□□□□ 0.47
LIMK2-203ENST00000340552 RBM43Q6ZSC3 357 aaKnown RBP17.97■□□□□ 0.47
LIMK2-203ENST00000340552 CCDC83Q8IWF9 413 aa17.97■□□□□ 0.47
LIMK2-203ENST00000340552 FMNL2Q96PY5 1086 aa17.97■□□□□ 0.47
LIMK2-203ENST00000340552 SNX14Q9Y5W7 946 aa17.97■□□□□ 0.47
LIMK2-203ENST00000340552 NBPF7P0C2Y1 421 aaPredicted RBP17.96■□□□□ 0.47
LIMK2-203ENST00000340552 CCDC93Q567U6 631 aa17.96■□□□□ 0.47
LIMK2-203ENST00000340552 FAM173BQ6P4H8 233 aa17.96■□□□□ 0.47
LIMK2-203ENST00000340552 DDX54Q8TDD1 881 aaKnown RBP17.96■□□□□ 0.47
LIMK2-203ENST00000340552 SYTL4Q96C24 671 aaPredicted RBP17.96■□□□□ 0.47
LIMK2-203ENST00000340552 UBXN6Q9BZV1 441 aa17.96■□□□□ 0.47
LIMK2-203ENST00000340552 USP16Q9Y5T5 823 aa17.96■□□□□ 0.47
LIMK2-203ENST00000340552 AIMP1Q12904 312 aaKnown RBP17.96■□□□□ 0.47
LIMK2-203ENST00000340552 RNF216Q9NWF9 866 aaPredicted RBP17.96■□□□□ 0.47
LIMK2-203ENST00000340552 AHDC1Q5TGY3 1603 aaPredicted RBP17.96■□□□□ 0.47
LIMK2-203ENST00000340552 DDX58O95786 925 aaKnown RBP17.96■□□□□ 0.46
LIMK2-203ENST00000340552 CPA1P15085 419 aa17.96■□□□□ 0.46
LIMK2-203ENST00000340552 CTR9Q6PD62 1173 aa17.96■□□□□ 0.46
LIMK2-203ENST00000340552 TMCO3Q6UWJ1 677 aa17.96■□□□□ 0.46
LIMK2-203ENST00000340552 SRLQ86TD4 932 aa17.96■□□□□ 0.46
LIMK2-203ENST00000340552 SEC31AO94979 1220 aaKnown RBP17.95■□□□□ 0.46
LIMK2-203ENST00000340552 MYL6BP14649 208 aa17.95■□□□□ 0.46
LIMK2-203ENST00000340552 FILIP1Q7Z7B0 1213 aa17.95■□□□□ 0.46
LIMK2-203ENST00000340552 RASEFQ8IZ41 740 aa17.95■□□□□ 0.46
LIMK2-203ENST00000340552 NKX1-1Q15270 411 aaPredicted RBP17.95■□□□□ 0.46
LIMK2-203ENST00000340552 MRFAP1L1Q96HT8 127 aa17.95■□□□□ 0.46
LIMK2-203ENST00000340552 CLSTN2Q9H4D0 955 aa17.95■□□□□ 0.46
LIMK2-203ENST00000340552 KCND1Q9NSA2 647 aa17.95■□□□□ 0.46
LIMK2-203ENST00000340552 SHANK3Q9BYB0 1731 aa17.94■□□□□ 0.46
LIMK2-203ENST00000340552 ERVV-2B6SEH9 535 aa17.94■□□□□ 0.46
LIMK2-203ENST00000340552 KIF2AO00139 706 aaPredicted RBP17.94■□□□□ 0.46
LIMK2-203ENST00000340552 OAS2P29728 719 aaKnown RBP17.94■□□□□ 0.46
LIMK2-203ENST00000340552 KRT85P78386 507 aa17.94■□□□□ 0.46
LIMK2-203ENST00000340552 SNW1Q13573 536 aaKnown RBP17.94■□□□□ 0.46
LIMK2-203ENST00000340552 SARM1Q6SZW1 724 aa17.94■□□□□ 0.46
LIMK2-203ENST00000340552 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.94■□□□□ 0.46
LIMK2-203ENST00000340552 RRP15Q9Y3B9 282 aaKnown RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms