RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 HSPA4P34932 840 aa13.39□□□□□ -0.27
SHANK2-201ENST00000338508 GIMAP6Q6P9H5 292 aa13.39□□□□□ -0.27
SHANK2-201ENST00000338508 NCOA7Q8NI08 942 aa13.39□□□□□ -0.27
SHANK2-201ENST00000338508 TTC12Q9H892 705 aaPredicted RBP13.39□□□□□ -0.27
SHANK2-201ENST00000338508 CCDC102BQ68D86 513 aa13.38□□□□□ -0.27
SHANK2-201ENST00000338508 RASAL2Q9UJF2 1139 aa13.38□□□□□ -0.27
SHANK2-201ENST00000338508 SYKP43405 635 aa13.38□□□□□ -0.27
SHANK2-201ENST00000338508 SETDB2Q96T68 719 aa13.38□□□□□ -0.27
SHANK2-201ENST00000338508 KRT5P13647 590 aa13.38□□□□□ -0.27
SHANK2-201ENST00000338508 ASIC1P78348 528 aa13.38□□□□□ -0.27
SHANK2-201ENST00000338508 NME9Q86XW9 330 aa13.38□□□□□ -0.27
SHANK2-201ENST00000338508 NEK1Q96PY6 1258 aa13.38□□□□□ -0.27
SHANK2-201ENST00000338508 STAC3Q96MF2 364 aa13.38□□□□□ -0.27
SHANK2-201ENST00000338508 TCEANC2Q96MN5 208 aa13.38□□□□□ -0.27
SHANK2-201ENST00000338508 ATP6V1AP38606 617 aa13.37□□□□□ -0.27
SHANK2-201ENST00000338508 MSL1Q68DK7 614 aa13.37□□□□□ -0.27
SHANK2-201ENST00000338508 EVI5LQ96CN4 794 aa13.37□□□□□ -0.27
SHANK2-201ENST00000338508 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.37□□□□□ -0.27
SHANK2-201ENST00000338508 KLF18A0A0U1RQI7 1052 aa13.37□□□□□ -0.27
SHANK2-201ENST00000338508 BACH1O14867 736 aa13.37□□□□□ -0.27
SHANK2-201ENST00000338508 SEPT14Q6ZU15 432 aa13.37□□□□□ -0.27
SHANK2-201ENST00000338508 CHST3Q7LGC8 479 aa13.37□□□□□ -0.27
SHANK2-201ENST00000338508 IFT81Q8WYA0 676 aa13.37□□□□□ -0.27
SHANK2-201ENST00000338508 PPANQ9NQ55 473 aaKnown RBP13.37□□□□□ -0.27
SHANK2-201ENST00000338508 TLDC2A0PJX2 215 aa13.37□□□□□ -0.27
SHANK2-201ENST00000338508 RSPH14Q9UHP6 348 aa13.37□□□□□ -0.27
SHANK2-201ENST00000338508 GSTO1P78417 241 aa13.37□□□□□ -0.27
SHANK2-201ENST00000338508 NCOA2Q15596 1464 aa13.36□□□□□ -0.27
SHANK2-201ENST00000338508 CUX1P39880 1505 aa13.36□□□□□ -0.27
SHANK2-201ENST00000338508 HMGB2P26583 209 aaKnown RBP13.36□□□□□ -0.27
SHANK2-201ENST00000338508 SPDYE3A6NKU9 549 aa13.36□□□□□ -0.27
SHANK2-201ENST00000338508 NOL3O60936 208 aaKnown RBP13.36□□□□□ -0.27
SHANK2-201ENST00000338508 ERCC3P19447 782 aa13.36□□□□□ -0.27
SHANK2-201ENST00000338508 ZNF165P49910 485 aa13.36□□□□□ -0.27
SHANK2-201ENST00000338508 C8orf37Q96NL8 207 aa13.36□□□□□ -0.27
SHANK2-201ENST00000338508 ALG1Q9BT22 464 aa13.36□□□□□ -0.27
SHANK2-201ENST00000338508 NESP48681 1621 aa13.36□□□□□ -0.27
SHANK2-201ENST00000338508 PSMD6Q15008 389 aa13.36□□□□□ -0.27
SHANK2-201ENST00000338508 DCAF17Q5H9S7 520 aaPredicted RBP13.36□□□□□ -0.27
SHANK2-201ENST00000338508 NOD1Q9Y239 953 aa13.36□□□□□ -0.27
SHANK2-201ENST00000338508 GMNNO75496 209 aa13.36□□□□□ -0.27
SHANK2-201ENST00000338508 CCDC152Q4G0S7 254 aa13.36□□□□□ -0.27
SHANK2-201ENST00000338508 USP37Q86T82 979 aa13.36□□□□□ -0.27
SHANK2-201ENST00000338508 NSRP1Q9H0G5 558 aaKnown RBP13.36□□□□□ -0.27
SHANK2-201ENST00000338508 GSDMDP57764 484 aa13.36□□□□□ -0.27
SHANK2-201ENST00000338508 PPP1R7Q15435 360 aa13.36□□□□□ -0.27
SHANK2-201ENST00000338508 SSH1Q8WYL5 1049 aa13.36□□□□□ -0.27
SHANK2-201ENST00000338508 DHX58Q96C10 678 aa13.36□□□□□ -0.27
SHANK2-201ENST00000338508 C6orf50Q9HD87 102 aa13.36□□□□□ -0.27
SHANK2-201ENST00000338508 CALCOCO1Q9P1Z2 691 aa13.36□□□□□ -0.27
SHANK2-201ENST00000338508 KIFC2Q96AC6 838 aa13.35□□□□□ -0.27
SHANK2-201ENST00000338508 UIMC1Q96RL1 719 aa13.35□□□□□ -0.27
SHANK2-201ENST00000338508 LRRC27Q9C0I9 530 aa13.35□□□□□ -0.27
SHANK2-201ENST00000338508 AGTPBP1Q9UPW5 1226 aa13.35□□□□□ -0.27
SHANK2-201ENST00000338508 POTEB2H3BUK9 544 aa13.35□□□□□ -0.27
SHANK2-201ENST00000338508 GAS8O95995 478 aa13.35□□□□□ -0.27
SHANK2-201ENST00000338508 AMOTQ4VCS5 1084 aa13.35□□□□□ -0.27
SHANK2-201ENST00000338508 KANK3Q6NY19 840 aa13.35□□□□□ -0.27
SHANK2-201ENST00000338508 PPP1R9BQ96SB3 815 aa13.35□□□□□ -0.27
SHANK2-201ENST00000338508 CEP83Q9Y592 693 aa13.35□□□□□ -0.27
SHANK2-201ENST00000338508 SEC62Q99442 399 aaKnown RBP13.35□□□□□ -0.27
SHANK2-201ENST00000338508 ZEB2O60315 1214 aa13.35□□□□□ -0.27
SHANK2-201ENST00000338508 NBPF7P0C2Y1 421 aaPredicted RBP13.35□□□□□ -0.27
SHANK2-201ENST00000338508 RTN1Q16799 776 aa13.35□□□□□ -0.27
SHANK2-201ENST00000338508 SPOUT1Q5T280 376 aaKnown RBP13.35□□□□□ -0.27
SHANK2-201ENST00000338508 MCM7P33993 719 aa13.35□□□□□ -0.27
SHANK2-201ENST00000338508 CEP57Q86XR8 500 aa13.34□□□□□ -0.27
SHANK2-201ENST00000338508 ZBTB43O43298 467 aa13.34□□□□□ -0.27
SHANK2-201ENST00000338508 RMND1Q9NWS8 449 aa13.34□□□□□ -0.27
SHANK2-201ENST00000338508 CCDC61Q9Y6R9 512 aa13.34□□□□□ -0.27
SHANK2-201ENST00000338508 MCM5P33992 734 aa13.34□□□□□ -0.27
SHANK2-201ENST00000338508 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.34□□□□□ -0.27
SHANK2-201ENST00000338508 ATP6V0A2Q9Y487 856 aa13.34□□□□□ -0.27
SHANK2-201ENST00000338508 V9GYY5 206 aaPredicted RBP13.34□□□□□ -0.27
SHANK2-201ENST00000338508 HGSO14964 777 aaPredicted RBP13.34□□□□□ -0.27
SHANK2-201ENST00000338508 ATP2A1O14983 1001 aa13.34□□□□□ -0.27
SHANK2-201ENST00000338508 TRIM7Q9C029 511 aa13.34□□□□□ -0.27
SHANK2-201ENST00000338508 DYNC1I1O14576 645 aa13.34□□□□□ -0.27
SHANK2-201ENST00000338508 CYLC1P35663 651 aaPredicted RBP13.34□□□□□ -0.27
SHANK2-201ENST00000338508 TNNI2P48788 182 aa13.34□□□□□ -0.27
SHANK2-201ENST00000338508 STX17P56962 302 aa13.34□□□□□ -0.27
SHANK2-201ENST00000338508 RAPGEF1Q13905 1077 aa13.34□□□□□ -0.27
SHANK2-201ENST00000338508 MAEAQ7L5Y9 396 aa13.34□□□□□ -0.27
SHANK2-201ENST00000338508 NACA2Q9H009 215 aa13.34□□□□□ -0.27
SHANK2-201ENST00000338508 DBF4Q9UBU7 674 aaPredicted RBP13.34□□□□□ -0.27
SHANK2-201ENST00000338508 TTLL3Q9Y4R7 772 aa13.34□□□□□ -0.27
SHANK2-201ENST00000338508 E7EVH7 732 aa13.34□□□□□ -0.27
SHANK2-201ENST00000338508 RRP9O43818 475 aaKnown RBP13.34□□□□□ -0.27
SHANK2-201ENST00000338508 PDIA4P13667 645 aaKnown RBP13.34□□□□□ -0.27
SHANK2-201ENST00000338508 KRT28Q7Z3Y7 464 aa13.34□□□□□ -0.27
SHANK2-201ENST00000338508 TNPO1Q92973 898 aaKnown RBP13.34□□□□□ -0.27
SHANK2-201ENST00000338508 DDX19AQ9NUU7 478 aaKnown RBP13.34□□□□□ -0.27
SHANK2-201ENST00000338508 MKRN1Q9UHC7 482 aaKnown RBP13.34□□□□□ -0.27
SHANK2-201ENST00000338508 DDX12PQ92771 950 aa13.33□□□□□ -0.27
SHANK2-201ENST00000338508 RAB3GAP1Q15042 981 aa13.33□□□□□ -0.28
SHANK2-201ENST00000338508 MIGA1Q8NAN2 632 aa13.33□□□□□ -0.28
SHANK2-201ENST00000338508 EMILIN1Q9Y6C2 1016 aa13.33□□□□□ -0.28
SHANK2-201ENST00000338508 CUL4BQ13620 913 aa13.33□□□□□ -0.28
SHANK2-201ENST00000338508 PRKG1Q13976 671 aa13.33□□□□□ -0.28
SHANK2-201ENST00000338508 NAA16Q6N069 864 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 918 ms