RNA–Protein interactions for RNA: ENST00000336520.7

MRPL55-203, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-203ENST00000336520 LDHDQ86WU2 507 aa14.38□□□□□ -0.11
MRPL55-203ENST00000336520 GPR101Q96P66 508 aaPredicted RBP14.38□□□□□ -0.11
MRPL55-203ENST00000336520 SMC4Q9NTJ3 1288 aa14.38□□□□□ -0.11
MRPL55-203ENST00000336520 PODXL2Q9NZ53 605 aa14.38□□□□□ -0.11
MRPL55-203ENST00000336520 CLEC11AQ9Y240 323 aa14.38□□□□□ -0.11
MRPL55-203ENST00000336520 PTPRCP08575 1304 aa14.38□□□□□ -0.11
MRPL55-203ENST00000336520 XDHP47989 1333 aa14.38□□□□□ -0.11
MRPL55-203ENST00000336520 G3V3G9 751 aa14.37□□□□□ -0.11
MRPL55-203ENST00000336520 ITGA6P23229 1130 aa14.37□□□□□ -0.11
MRPL55-203ENST00000336520 SCNN1DP51172 638 aa14.37□□□□□ -0.11
MRPL55-203ENST00000336520 ALDH1L2Q3SY69 923 aa14.37□□□□□ -0.11
MRPL55-203ENST00000336520 DCAF8Q5TAQ9 597 aa14.37□□□□□ -0.11
MRPL55-203ENST00000336520 TRMT2AQ8IZ69 625 aaKnown RBP14.37□□□□□ -0.11
MRPL55-203ENST00000336520 ZC3H12CQ9C0D7 883 aaKnown RBP14.37□□□□□ -0.11
MRPL55-203ENST00000336520 DBNDD1Q9H9R9 158 aa14.37□□□□□ -0.11
MRPL55-203ENST00000336520 BSDC1Q9NW68 430 aaPredicted RBP14.37□□□□□ -0.11
MRPL55-203ENST00000336520 CHMP3Q9Y3E7 222 aa14.37□□□□□ -0.11
MRPL55-203ENST00000336520 LTBP1Q14766 1721 aa14.37□□□□□ -0.11
MRPL55-203ENST00000336520 SPEF2Q9C093 1822 aa14.36□□□□□ -0.11
MRPL55-203ENST00000336520 CT47B1P0C2W7 299 aaPredicted RBP14.36□□□□□ -0.11
MRPL55-203ENST00000336520 GMPSP49915 693 aaPredicted RBP14.36□□□□□ -0.11
MRPL55-203ENST00000336520 DOK7Q18PE1 504 aa14.36□□□□□ -0.11
MRPL55-203ENST00000336520 MPHOSPH8Q99549 860 aa14.36□□□□□ -0.11
MRPL55-203ENST00000336520 ANKRD18BA2A2Z9 1011 aa14.35□□□□□ -0.11
MRPL55-203ENST00000336520 YDJCA8MPS7 323 aa14.35□□□□□ -0.11
MRPL55-203ENST00000336520 ECE2O60344 883 aa14.35□□□□□ -0.11
MRPL55-203ENST00000336520 CSF1RP07333 972 aa14.35□□□□□ -0.11
MRPL55-203ENST00000336520 ATP2B4P23634 1241 aa14.35□□□□□ -0.11
MRPL55-203ENST00000336520 EPS15P42566 896 aa14.35□□□□□ -0.11
MRPL55-203ENST00000336520 HTRA3P83110 453 aa14.35□□□□□ -0.11
MRPL55-203ENST00000336520 IFIT5Q13325 482 aaKnown RBP14.35□□□□□ -0.11
MRPL55-203ENST00000336520 GPRC5DQ9NZD1 345 aa14.35□□□□□ -0.11
MRPL55-203ENST00000336520 FOXO4P98177 505 aa14.34□□□□□ -0.11
MRPL55-203ENST00000336520 HNRNPUQ00839 825 aaKnown RBP eCLIP14.34□□□□□ -0.11
MRPL55-203ENST00000336520 MINPP1Q9UNW1 487 aa14.34□□□□□ -0.11
MRPL55-203ENST00000336520 PSMD14O00487 310 aa14.33□□□□□ -0.12
MRPL55-203ENST00000336520 EPHA10Q5JZY3 1008 aa14.33□□□□□ -0.12
MRPL55-203ENST00000336520 LMBR1LQ6UX01 489 aa14.33□□□□□ -0.12
MRPL55-203ENST00000336520 ANKRD2Q9GZV1 360 aa14.33□□□□□ -0.12
MRPL55-203ENST00000336520 KCNJ4P48050 445 aa14.32□□□□□ -0.12
MRPL55-203ENST00000336520 CCT4P50991 539 aaKnown RBP14.32□□□□□ -0.12
MRPL55-203ENST00000336520 CCDC57Q2TAC2 916 aa14.32□□□□□ -0.12
MRPL55-203ENST00000336520 TAF7LQ5H9L4 462 aa14.32□□□□□ -0.12
MRPL55-203ENST00000336520 MAP1SQ66K74 1059 aaPredicted RBP14.32□□□□□ -0.12
MRPL55-203ENST00000336520 USP50Q70EL3 339 aaPredicted RBP14.32□□□□□ -0.12
MRPL55-203ENST00000336520 ADARB2Q9NS39 739 aaKnown RBP14.32□□□□□ -0.12
MRPL55-203ENST00000336520 NBPF7P0C2Y1 421 aaPredicted RBP14.31□□□□□ -0.12
MRPL55-203ENST00000336520 SUCLG2Q96I99 432 aa14.31□□□□□ -0.12
MRPL55-203ENST00000336520 KCNQ5Q9NR82 932 aa14.31□□□□□ -0.12
MRPL55-203ENST00000336520 ZBTB12Q9Y330 459 aaPredicted RBP14.31□□□□□ -0.12
MRPL55-203ENST00000336520 ADAMTSL1Q8N6G6 1762 aa14.31□□□□□ -0.12
MRPL55-203ENST00000336520 MED23Q9ULK4 1368 aa14.31□□□□□ -0.12
MRPL55-203ENST00000336520 H7C1D1 291 aa14.3□□□□□ -0.12
MRPL55-203ENST00000336520 RPS12P25398 132 aaKnown RBP14.3□□□□□ -0.12
MRPL55-203ENST00000336520 CHRNDQ07001 517 aa14.3□□□□□ -0.12
MRPL55-203ENST00000336520 MICALL2Q8IY33 904 aa14.3□□□□□ -0.12
MRPL55-203ENST00000336520 CNTROBQ8N137 903 aa14.3□□□□□ -0.12
MRPL55-203ENST00000336520 CNOT7Q9UIV1 285 aaKnown RBP14.3□□□□□ -0.12
MRPL55-203ENST00000336520 NOB1Q9ULX3 412 aaKnown RBP14.3□□□□□ -0.12
MRPL55-203ENST00000336520 LEMD3Q9Y2U8 911 aa14.3□□□□□ -0.12
MRPL55-203ENST00000336520 WTIPA6NIX2 430 aaPredicted RBP14.29□□□□□ -0.12
MRPL55-203ENST00000336520 ITGBL1O95965 494 aaPredicted RBP14.29□□□□□ -0.12
MRPL55-203ENST00000336520 RARSP54136 660 aaKnown RBP14.29□□□□□ -0.12
MRPL55-203ENST00000336520 DNAJC5GQ8N7S2 189 aa14.29□□□□□ -0.12
MRPL55-203ENST00000336520 DPF2Q92785 391 aa14.29□□□□□ -0.12
MRPL55-203ENST00000336520 ZNF594Q96JF6 807 aaPredicted RBP14.29□□□□□ -0.12
MRPL55-203ENST00000336520 API5Q9BZZ5 524 aaKnown RBP14.29□□□□□ -0.12
MRPL55-203ENST00000336520 CNNM1Q9NRU3 951 aa14.29□□□□□ -0.12
MRPL55-203ENST00000336520 ZNF804BA4D1E1 1349 aa14.29□□□□□ -0.12
MRPL55-203ENST00000336520 UTYO14607 1347 aa14.29□□□□□ -0.12
MRPL55-203ENST00000336520 KIF16BQ96L93 1317 aa14.29□□□□□ -0.12
MRPL55-203ENST00000336520 SHTN1A0MZ66 631 aa14.28□□□□□ -0.12
MRPL55-203ENST00000336520 SCN9AQ15858 1988 aa14.28□□□□□ -0.12
MRPL55-203ENST00000336520 LDHAL6AQ6ZMR3 332 aa14.28□□□□□ -0.12
MRPL55-203ENST00000336520 PODNQ7Z5L7 613 aa14.28□□□□□ -0.12
MRPL55-203ENST00000336520 HELBQ8NG08 1087 aaPredicted RBP14.28□□□□□ -0.12
MRPL55-203ENST00000336520 KLRG1Q96E93 195 aa14.28□□□□□ -0.12
MRPL55-203ENST00000336520 PASKQ96RG2 1323 aa14.28□□□□□ -0.12
MRPL55-203ENST00000336520 BICC1Q9H694 974 aaKnown RBP14.28□□□□□ -0.12
MRPL55-203ENST00000336520 CREBZFQ9NS37 354 aa14.28□□□□□ -0.12
MRPL55-203ENST00000336520 VIL1P09327 827 aaKnown RBP14.27□□□□□ -0.13
MRPL55-203ENST00000336520 BRPF1P55201 1214 aaPredicted RBP14.27□□□□□ -0.13
MRPL55-203ENST00000336520 TRPM4Q8TD43 1214 aa14.27□□□□□ -0.13
MRPL55-203ENST00000336520 FBXW7Q969H0 707 aa14.27□□□□□ -0.13
MRPL55-203ENST00000336520 KAZALD1Q96I82 304 aa14.27□□□□□ -0.13
MRPL55-203ENST00000336520 USP44Q9H0E7 712 aa14.27□□□□□ -0.13
MRPL55-203ENST00000336520 USP17L3A6NCW0 530 aa14.26□□□□□ -0.13
MRPL55-203ENST00000336520 USP17L4A6NCW7 530 aa14.26□□□□□ -0.13
MRPL55-203ENST00000336520 TMEM88BA6NKF7 163 aa14.26□□□□□ -0.13
MRPL55-203ENST00000336520 PLIN1O60240 522 aa14.26□□□□□ -0.13
MRPL55-203ENST00000336520 TAF5LO75529 589 aa14.26□□□□□ -0.13
MRPL55-203ENST00000336520 KLRK1P26718 216 aa14.26□□□□□ -0.13
MRPL55-203ENST00000336520 TBC1D10BQ4KMP7 808 aaPredicted RBP14.26□□□□□ -0.13
MRPL55-203ENST00000336520 RSBN1LQ6PCB5 846 aaPredicted RBP14.26□□□□□ -0.13
MRPL55-203ENST00000336520 USP17L1Q7RTZ2 530 aa14.26□□□□□ -0.13
MRPL55-203ENST00000336520 SAMD7Q7Z3H4 446 aa14.26□□□□□ -0.13
MRPL55-203ENST00000336520 COA1Q9GZY4 146 aa14.26□□□□□ -0.13
MRPL55-203ENST00000336520 HIRAP54198 1017 aaPredicted RBP14.25□□□□□ -0.13
MRPL55-203ENST00000336520 RABL6Q3YEC7 729 aaPredicted RBP14.25□□□□□ -0.13
MRPL55-203ENST00000336520 RBM26Q5T8P6 1007 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms