RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 FAM208AQ9UK61 1670 aaKnown RBP19.42■□□□□ 0.7
CDC42EP4-201ENST00000335793 SLFNL1Q499Z3 407 aa19.42■□□□□ 0.7
CDC42EP4-201ENST00000335793 LMBR1LQ6UX01 489 aa19.42■□□□□ 0.7
CDC42EP4-201ENST00000335793 PROSER2Q86WR7 435 aaPredicted RBP19.42■□□□□ 0.7
CDC42EP4-201ENST00000335793 METTL22Q9BUU2 404 aaPredicted RBP19.41■□□□□ 0.7
CDC42EP4-201ENST00000335793 CBX8Q9HC52 389 aa19.41■□□□□ 0.7
CDC42EP4-201ENST00000335793 TPM3P06753 285 aa19.41■□□□□ 0.7
CDC42EP4-201ENST00000335793 CHRNA2Q15822 529 aa19.41■□□□□ 0.7
CDC42EP4-201ENST00000335793 GORABQ5T7V8 394 aa19.41■□□□□ 0.7
CDC42EP4-201ENST00000335793 DDX19AQ9NUU7 478 aaKnown RBP19.41■□□□□ 0.7
CDC42EP4-201ENST00000335793 MRVI1Q9Y6F6 885 aa19.41■□□□□ 0.7
CDC42EP4-201ENST00000335793 ZRSR1Q15695 479 aaKnown RBP19.4■□□□□ 0.7
CDC42EP4-201ENST00000335793 CABLES1Q8TDN4 633 aa19.4■□□□□ 0.7
CDC42EP4-201ENST00000335793 C16orf45Q96MC5 204 aaPredicted RBP19.4■□□□□ 0.7
CDC42EP4-201ENST00000335793 FUCA2Q9BTY2 467 aa19.4■□□□□ 0.7
CDC42EP4-201ENST00000335793 TIMM10P62072 90 aa19.4■□□□□ 0.7
CDC42EP4-201ENST00000335793 TMX1Q9H3N1 280 aa19.4■□□□□ 0.7
CDC42EP4-201ENST00000335793 LRMPQ12912 555 aa19.4■□□□□ 0.7
CDC42EP4-201ENST00000335793 MCMDC2Q4G0Z9 681 aa19.4■□□□□ 0.7
CDC42EP4-201ENST00000335793 NWD1Q149M9 1564 aa19.39■□□□□ 0.7
CDC42EP4-201ENST00000335793 NRBP1Q9UHY1 535 aa19.39■□□□□ 0.69
CDC42EP4-201ENST00000335793 CFAP45Q9UL16 551 aa19.39■□□□□ 0.69
CDC42EP4-201ENST00000335793 U3KPZ7 1027 aaPredicted RBP19.39■□□□□ 0.69
CDC42EP4-201ENST00000335793 FER1L4A9Z1Z3 1794 aa19.39■□□□□ 0.69
CDC42EP4-201ENST00000335793 CACNA1FO60840 1977 aa19.39■□□□□ 0.69
CDC42EP4-201ENST00000335793 CABP4P57796 275 aa19.39■□□□□ 0.69
CDC42EP4-201ENST00000335793 PDIA6Q15084 440 aa19.39■□□□□ 0.69
CDC42EP4-201ENST00000335793 DDX17Q92841 729 aaKnown RBP19.39■□□□□ 0.69
CDC42EP4-201ENST00000335793 CCDC85AQ96PX6 553 aaPredicted RBP19.39■□□□□ 0.69
CDC42EP4-201ENST00000335793 SLC52A2Q9HAB3 445 aa19.39■□□□□ 0.69
CDC42EP4-201ENST00000335793 APOBRQ0VD83 1088 aa19.38■□□□□ 0.69
CDC42EP4-201ENST00000335793 CYP21A2P08686 494 aa19.38■□□□□ 0.69
CDC42EP4-201ENST00000335793 SNRPA1P09661 255 aaKnown RBP19.38■□□□□ 0.69
CDC42EP4-201ENST00000335793 ME1P48163 572 aa19.38■□□□□ 0.69
CDC42EP4-201ENST00000335793 CCDC73Q6ZRK6 1079 aa19.38■□□□□ 0.69
CDC42EP4-201ENST00000335793 TNNT3P45378 269 aaPredicted RBP19.38■□□□□ 0.69
CDC42EP4-201ENST00000335793 SF3A1Q15459 793 aaKnown RBP19.38■□□□□ 0.69
CDC42EP4-201ENST00000335793 KIAA1524Q8TCG1 905 aa19.38■□□□□ 0.69
CDC42EP4-201ENST00000335793 KCNB2Q92953 911 aa19.38■□□□□ 0.69
CDC42EP4-201ENST00000335793 ATP5JP18859 108 aa19.37■□□□□ 0.69
CDC42EP4-201ENST00000335793 FKBP4Q02790 459 aaKnown RBP eCLIP19.37■□□□□ 0.69
CDC42EP4-201ENST00000335793 PTPN12Q05209 780 aaKnown RBP19.37■□□□□ 0.69
CDC42EP4-201ENST00000335793 GTF3C6Q969F1 213 aa19.37■□□□□ 0.69
CDC42EP4-201ENST00000335793 KCNF1Q9H3M0 494 aa19.37■□□□□ 0.69
CDC42EP4-201ENST00000335793 NCOA5Q9HCD5 579 aaKnown RBP19.37■□□□□ 0.69
CDC42EP4-201ENST00000335793 PXDNQ92626 1479 aa19.37■□□□□ 0.69
CDC42EP4-201ENST00000335793 FTOQ9C0B1 505 aaKnown RBP eCLIP19.37■□□□□ 0.69
CDC42EP4-201ENST00000335793 CLIP2Q9UDT6 1046 aa19.37■□□□□ 0.69
CDC42EP4-201ENST00000335793 A0A087WWV3 80 aa19.36■□□□□ 0.69
CDC42EP4-201ENST00000335793 FILIP1Q7Z7B0 1213 aa19.36■□□□□ 0.69
CDC42EP4-201ENST00000335793 IFNL2Q8IZJ0 200 aa19.36■□□□□ 0.69
CDC42EP4-201ENST00000335793 RGS22Q8NE09 1264 aa19.36■□□□□ 0.69
CDC42EP4-201ENST00000335793 TPD52L1Q16890 204 aaPredicted RBP19.36■□□□□ 0.69
CDC42EP4-201ENST00000335793 WASHC4Q2M389 1173 aa19.36■□□□□ 0.69
CDC42EP4-201ENST00000335793 KINO60870 393 aaKnown RBP19.36■□□□□ 0.69
CDC42EP4-201ENST00000335793 ERCC4Q92889 916 aaPredicted RBP19.36■□□□□ 0.69
CDC42EP4-201ENST00000335793 FMNL2Q96PY5 1086 aa19.36■□□□□ 0.69
CDC42EP4-201ENST00000335793 SNRKQ9NRH2 765 aa19.36■□□□□ 0.69
CDC42EP4-201ENST00000335793 RIOK3O14730 519 aaKnown RBP19.35■□□□□ 0.69
CDC42EP4-201ENST00000335793 CCAR1Q8IX12 1150 aaKnown RBP19.35■□□□□ 0.69
CDC42EP4-201ENST00000335793 PGBD1Q96JS3 809 aa19.35■□□□□ 0.69
CDC42EP4-201ENST00000335793 SDF4Q9BRK5 362 aa19.35■□□□□ 0.69
CDC42EP4-201ENST00000335793 CLSTN2Q9H4D0 955 aa19.35■□□□□ 0.69
CDC42EP4-201ENST00000335793 NAA30Q147X3 362 aaPredicted RBP19.35■□□□□ 0.69
CDC42EP4-201ENST00000335793 RAB11FIP4Q86YS3 637 aa19.35■□□□□ 0.69
CDC42EP4-201ENST00000335793 TIGD1Q96MW7 591 aa19.35■□□□□ 0.69
CDC42EP4-201ENST00000335793 COPRSQ9NQ92 184 aa19.35■□□□□ 0.69
CDC42EP4-201ENST00000335793 SCRN1Q12765 414 aa19.35■□□□□ 0.69
CDC42EP4-201ENST00000335793 ZBTB3Q9H5J0 574 aa19.35■□□□□ 0.69
CDC42EP4-201ENST00000335793 ELP1O95163 1332 aa19.34■□□□□ 0.69
CDC42EP4-201ENST00000335793 HAND2P61296 217 aa19.34■□□□□ 0.69
CDC42EP4-201ENST00000335793 TEX2Q8IWB9 1127 aa19.33■□□□□ 0.69
CDC42EP4-201ENST00000335793 ZNF594Q96JF6 807 aaPredicted RBP19.33■□□□□ 0.69
CDC42EP4-201ENST00000335793 IFIT1P09914 478 aaKnown RBP19.33■□□□□ 0.68
CDC42EP4-201ENST00000335793 ZSCAN16Q9H4T2 348 aaPredicted RBP19.33■□□□□ 0.68
CDC42EP4-201ENST00000335793 PTPDC1A2A3K4 754 aa19.33■□□□□ 0.68
CDC42EP4-201ENST00000335793 PHKG2P15735 406 aa19.33■□□□□ 0.68
CDC42EP4-201ENST00000335793 DHX32Q7L7V1 743 aaKnown RBP19.32■□□□□ 0.68
CDC42EP4-201ENST00000335793 PAG1Q9NWQ8 432 aa19.32■□□□□ 0.68
CDC42EP4-201ENST00000335793 ERBB3P21860 1342 aa19.32■□□□□ 0.68
CDC42EP4-201ENST00000335793 TNNT1P13805 278 aa19.32■□□□□ 0.68
CDC42EP4-201ENST00000335793 ARHGAP23Q9P227 1491 aa19.32■□□□□ 0.68
CDC42EP4-201ENST00000335793 CAPN2P17655 700 aa19.31■□□□□ 0.68
CDC42EP4-201ENST00000335793 ZNF75DP51815 510 aa19.31■□□□□ 0.68
CDC42EP4-201ENST00000335793 KBTBD3Q8NAB2 608 aa19.31■□□□□ 0.68
CDC42EP4-201ENST00000335793 MED23Q9ULK4 1368 aa19.31■□□□□ 0.68
CDC42EP4-201ENST00000335793 APPP05067 770 aa19.31■□□□□ 0.68
CDC42EP4-201ENST00000335793 SPTLC3Q9NUV7 552 aa19.31■□□□□ 0.68
CDC42EP4-201ENST00000335793 SLIT1O75093 1534 aa19.3■□□□□ 0.68
CDC42EP4-201ENST00000335793 UTYO14607 1347 aa19.3■□□□□ 0.68
CDC42EP4-201ENST00000335793 POLR3DP05423 398 aaPredicted RBP19.3■□□□□ 0.68
CDC42EP4-201ENST00000335793 OTUD7BQ6GQQ9 843 aa19.3■□□□□ 0.68
CDC42EP4-201ENST00000335793 FSIP1Q8NA03 581 aa19.3■□□□□ 0.68
CDC42EP4-201ENST00000335793 LRRC37A3O60309 1634 aa19.3■□□□□ 0.68
CDC42EP4-201ENST00000335793 RESTQ13127 1097 aa19.3■□□□□ 0.68
CDC42EP4-201ENST00000335793 HSP90AB3PQ58FF7 597 aa19.3■□□□□ 0.68
CDC42EP4-201ENST00000335793 ZNF396Q96N95 335 aaPredicted RBP19.3■□□□□ 0.68
CDC42EP4-201ENST00000335793 HAUS7Q99871 368 aa19.3■□□□□ 0.68
CDC42EP4-201ENST00000335793 CCDC66A2RUB6 948 aa19.29■□□□□ 0.68
CDC42EP4-201ENST00000335793 CPLX1O14810 134 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms