RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 E2F6O75461 281 aa9.87□□□□□ -0.83
TDP1-201ENST00000335725 FERP16591 822 aa9.87□□□□□ -0.83
TDP1-201ENST00000335725 KCNJ6P48051 423 aa9.87□□□□□ -0.83
TDP1-201ENST00000335725 SMTNP53814 917 aa9.87□□□□□ -0.83
TDP1-201ENST00000335725 NUCB1Q02818 461 aa9.87□□□□□ -0.83
TDP1-201ENST00000335725 GORABQ5T7V8 394 aa9.87□□□□□ -0.83
TDP1-201ENST00000335725 HOMER1Q86YM7 354 aa9.87□□□□□ -0.83
TDP1-201ENST00000335725 TLDC1Q6P9B6 456 aa9.87□□□□□ -0.83
TDP1-201ENST00000335725 ERICH2A1L162 156 aa9.86□□□□□ -0.83
TDP1-201ENST00000335725 PAPOLAP51003 745 aaKnown RBP9.86□□□□□ -0.83
TDP1-201ENST00000335725 NAT10Q9H0A0 1025 aaKnown RBP9.86□□□□□ -0.83
TDP1-201ENST00000335725 ABCF2Q9UG63 623 aa9.86□□□□□ -0.83
TDP1-201ENST00000335725 RIPOR2Q9Y4F9 1068 aa9.86□□□□□ -0.83
TDP1-201ENST00000335725 SKAP2O75563 359 aaPredicted RBP9.86□□□□□ -0.83
TDP1-201ENST00000335725 ZNF24P17028 368 aa9.86□□□□□ -0.83
TDP1-201ENST00000335725 CCDC38Q502W7 563 aa9.86□□□□□ -0.83
TDP1-201ENST00000335725 RBM26Q5T8P6 1007 aaKnown RBP9.86□□□□□ -0.83
TDP1-201ENST00000335725 CCDC102AQ96A19 550 aa9.86□□□□□ -0.83
TDP1-201ENST00000335725 XAGE2Q96GT9 111 aa9.86□□□□□ -0.83
TDP1-201ENST00000335725 KIF14Q15058 1648 aa9.86□□□□□ -0.83
TDP1-201ENST00000335725 REREQ9P2R6 1566 aa9.86□□□□□ -0.83
TDP1-201ENST00000335725 CCDC69A6NI79 296 aa9.86□□□□□ -0.83
TDP1-201ENST00000335725 PDLIM1O00151 329 aa9.86□□□□□ -0.83
TDP1-201ENST00000335725 TUBBP07437 444 aa9.86□□□□□ -0.83
TDP1-201ENST00000335725 ETF1P62495 437 aaKnown RBP9.86□□□□□ -0.83
TDP1-201ENST00000335725 ARMC9Q7Z3E5 817 aa9.86□□□□□ -0.83
TDP1-201ENST00000335725 EPAS1Q99814 870 aa9.86□□□□□ -0.83
TDP1-201ENST00000335725 RPGRIP1LQ68CZ1 1315 aa9.85□□□□□ -0.83
TDP1-201ENST00000335725 A6NNZ2 444 aa9.85□□□□□ -0.83
TDP1-201ENST00000335725 KIF5CO60282 957 aa9.85□□□□□ -0.83
TDP1-201ENST00000335725 CCT5P48643 541 aa9.85□□□□□ -0.83
TDP1-201ENST00000335725 CCDC57Q2TAC2 916 aa9.85□□□□□ -0.83
TDP1-201ENST00000335725 TUBB8Q3ZCM7 444 aa9.85□□□□□ -0.83
TDP1-201ENST00000335725 ZKSCAN2Q63HK3 967 aa9.85□□□□□ -0.83
TDP1-201ENST00000335725 C16orf87Q6PH81 154 aa9.85□□□□□ -0.83
TDP1-201ENST00000335725 CHD1LQ86WJ1 897 aa9.85□□□□□ -0.83
TDP1-201ENST00000335725 TRIM58Q8NG06 486 aa9.85□□□□□ -0.83
TDP1-201ENST00000335725 GOLGA1Q92805 767 aa9.85□□□□□ -0.83
TDP1-201ENST00000335725 PARD6BQ9BYG5 372 aa9.85□□□□□ -0.83
TDP1-201ENST00000335725 TMEM165Q9HC07 324 aa9.85□□□□□ -0.83
TDP1-201ENST00000335725 DENND4BO75064 1496 aaPredicted RBP9.85□□□□□ -0.83
TDP1-201ENST00000335725 GOLGA6L7A0A1B0GV03 622 aa9.85□□□□□ -0.83
TDP1-201ENST00000335725 RARSP54136 660 aaKnown RBP9.85□□□□□ -0.83
TDP1-201ENST00000335725 ZBED6P86452 979 aa9.85□□□□□ -0.83
TDP1-201ENST00000335725 ATP2B2Q01814 1243 aa9.85□□□□□ -0.83
TDP1-201ENST00000335725 MAP3K11Q16584 847 aa9.85□□□□□ -0.83
TDP1-201ENST00000335725 INF2Q27J81 1249 aa9.85□□□□□ -0.83
TDP1-201ENST00000335725 KLHL10Q6JEL2 608 aa9.85□□□□□ -0.83
TDP1-201ENST00000335725 RNF168Q8IYW5 571 aaPredicted RBP9.85□□□□□ -0.83
TDP1-201ENST00000335725 NME8Q8N427 588 aa9.85□□□□□ -0.83
TDP1-201ENST00000335725 PHC3Q8NDX5 983 aa9.85□□□□□ -0.83
TDP1-201ENST00000335725 CARD6Q9BX69 1037 aa9.85□□□□□ -0.83
TDP1-201ENST00000335725 CARD11Q9BXL7 1154 aa9.85□□□□□ -0.83
TDP1-201ENST00000335725 FAM204AQ9H8W3 233 aa9.85□□□□□ -0.83
TDP1-201ENST00000335725 SPATA7Q9P0W8 599 aa9.85□□□□□ -0.83
TDP1-201ENST00000335725 DDX19BQ9UMR2 479 aa9.85□□□□□ -0.83
TDP1-201ENST00000335725 PTPRKQ15262 1439 aa9.85□□□□□ -0.83
TDP1-201ENST00000335725 SPDYE3A6NKU9 549 aa9.85□□□□□ -0.83
TDP1-201ENST00000335725 KIF3BO15066 747 aa9.85□□□□□ -0.83
TDP1-201ENST00000335725 URI1O94763 535 aaPredicted RBP9.85□□□□□ -0.83
TDP1-201ENST00000335725 USP4Q13107 963 aa9.85□□□□□ -0.83
TDP1-201ENST00000335725 LUZP1Q86V48 1076 aa9.85□□□□□ -0.83
TDP1-201ENST00000335725 KIAA0825Q8IV33 1275 aa9.85□□□□□ -0.83
TDP1-201ENST00000335725 CHAMP1Q96JM3 812 aa9.85□□□□□ -0.83
TDP1-201ENST00000335725 DDX20Q9UHI6 824 aaKnown RBP9.85□□□□□ -0.83
TDP1-201ENST00000335725 ANKRD50Q9ULJ7 1429 aa9.85□□□□□ -0.83
TDP1-201ENST00000335725 ZNF644Q9H582 1327 aaPredicted RBP9.84□□□□□ -0.83
TDP1-201ENST00000335725 PER1O15534 1290 aaPredicted RBP9.84□□□□□ -0.83
TDP1-201ENST00000335725 FNTAP49354 379 aa9.84□□□□□ -0.83
TDP1-201ENST00000335725 IFFO1Q0D2I5 559 aa9.84□□□□□ -0.83
TDP1-201ENST00000335725 DCTN1Q14203 1278 aa9.84□□□□□ -0.83
TDP1-201ENST00000335725 THEMIS2Q5TEJ8 643 aa9.84□□□□□ -0.83
TDP1-201ENST00000335725 TTLL7Q6ZT98 887 aa9.84□□□□□ -0.83
TDP1-201ENST00000335725 ZFAND2BQ8WV99 257 aa9.84□□□□□ -0.83
TDP1-201ENST00000335725 CCDC47Q96A33 483 aaKnown RBP9.84□□□□□ -0.83
TDP1-201ENST00000335725 RUFY1Q96T51 708 aa9.84□□□□□ -0.83
TDP1-201ENST00000335725 POLR3CQ9BUI4 534 aaPredicted RBP9.84□□□□□ -0.83
TDP1-201ENST00000335725 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.84□□□□□ -0.83
TDP1-201ENST00000335725 SMARCA5O60264 1052 aaPredicted RBP9.84□□□□□ -0.83
TDP1-201ENST00000335725 PSMC1P62191 440 aaKnown RBP9.84□□□□□ -0.83
TDP1-201ENST00000335725 SFMBT2Q5VUG0 894 aa9.84□□□□□ -0.83
TDP1-201ENST00000335725 IQCF2Q8IXL9 164 aa9.84□□□□□ -0.83
TDP1-201ENST00000335725 LRRN4CLQ8ND94 238 aa9.84□□□□□ -0.83
TDP1-201ENST00000335725 CORO1CQ9ULV4 474 aaPredicted RBP9.84□□□□□ -0.83
TDP1-201ENST00000335725 LIN7AO14910 233 aaPredicted RBP9.84□□□□□ -0.83
TDP1-201ENST00000335725 TXLNAP40222 546 aa9.84□□□□□ -0.83
TDP1-201ENST00000335725 CUL3Q13618 768 aa9.84□□□□□ -0.83
TDP1-201ENST00000335725 KIF4BQ2VIQ3 1234 aa9.84□□□□□ -0.83
TDP1-201ENST00000335725 SARM1Q6SZW1 724 aa9.84□□□□□ -0.83
TDP1-201ENST00000335725 APLFQ8IW19 511 aaPredicted RBP9.84□□□□□ -0.83
TDP1-201ENST00000335725 SAMD3Q8N6K7 520 aa9.84□□□□□ -0.83
TDP1-201ENST00000335725 RBM41Q96IZ5 413 aaKnown RBP9.84□□□□□ -0.83
TDP1-201ENST00000335725 PLEKHA4Q9H4M7 779 aa9.84□□□□□ -0.83
TDP1-201ENST00000335725 PAPOLBQ9NRJ5 636 aaKnown RBP9.84□□□□□ -0.83
TDP1-201ENST00000335725 TSNAXIP1Q2TAA8 658 aa9.83□□□□□ -0.84
TDP1-201ENST00000335725 SMARCC1Q92922 1105 aaPredicted RBP9.83□□□□□ -0.84
TDP1-201ENST00000335725 PPP1R13BQ96KQ4 1090 aa9.83□□□□□ -0.84
TDP1-201ENST00000335725 CENPHQ9H3R5 247 aa9.83□□□□□ -0.84
TDP1-201ENST00000335725 GDPD2Q9HCC8 539 aa9.83□□□□□ -0.84
TDP1-201ENST00000335725 PCDHGC5Q9Y5F6 944 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms