RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 NRBP1Q9UHY1 535 aa14.59□□□□□ -0.07
VPS33B-201ENST00000333371 FPGT-TNNI3KV9GXZ4 949 aa14.59□□□□□ -0.07
VPS33B-201ENST00000333371 CYP21A2P08686 494 aa14.59□□□□□ -0.07
VPS33B-201ENST00000333371 RFX5P48382 616 aaPredicted RBP14.59□□□□□ -0.07
VPS33B-201ENST00000333371 CABP4P57796 275 aa14.59□□□□□ -0.07
VPS33B-201ENST00000333371 KIAA1524Q8TCG1 905 aa14.59□□□□□ -0.07
VPS33B-201ENST00000333371 CBX8Q9HC52 389 aa14.59□□□□□ -0.07
VPS33B-201ENST00000333371 SPTLC3Q9NUV7 552 aa14.59□□□□□ -0.07
VPS33B-201ENST00000333371 PDCP20941 246 aa14.58□□□□□ -0.07
VPS33B-201ENST00000333371 LRMPQ12912 555 aa14.58□□□□□ -0.07
VPS33B-201ENST00000333371 ANKRD13DQ6ZTN6 518 aa14.58□□□□□ -0.07
VPS33B-201ENST00000333371 LAMA4Q16363 1823 aa14.58□□□□□ -0.07
VPS33B-201ENST00000333371 A0A087WWV3 80 aa14.58□□□□□ -0.08
VPS33B-201ENST00000333371 ANKRD1Q15327 319 aa14.58□□□□□ -0.08
VPS33B-201ENST00000333371 BICD2Q8TD16 824 aa14.58□□□□□ -0.08
VPS33B-201ENST00000333371 NEK1Q96PY6 1258 aa14.58□□□□□ -0.08
VPS33B-201ENST00000333371 ELP1O95163 1332 aa14.58□□□□□ -0.08
VPS33B-201ENST00000333371 PKD1L3Q7Z443 1732 aa14.58□□□□□ -0.08
VPS33B-201ENST00000333371 KDM4FA0A1W2PPD8 638 aa14.57□□□□□ -0.08
VPS33B-201ENST00000333371 STOX1Q6ZVD7 989 aa14.57□□□□□ -0.08
VPS33B-201ENST00000333371 GTF3C6Q969F1 213 aa14.57□□□□□ -0.08
VPS33B-201ENST00000333371 JCADQ9P266 1359 aa14.57□□□□□ -0.08
VPS33B-201ENST00000333371 DNAJC25Q9H1X3 360 aa14.57□□□□□ -0.08
VPS33B-201ENST00000333371 PLEKHG2Q9H7P9 1386 aa14.57□□□□□ -0.08
VPS33B-201ENST00000333371 SNRPA1P09661 255 aaKnown RBP14.56□□□□□ -0.08
VPS33B-201ENST00000333371 ATP5JP18859 108 aa14.56□□□□□ -0.08
VPS33B-201ENST00000333371 LRP10Q7Z4F1 713 aa14.56□□□□□ -0.08
VPS33B-201ENST00000333371 FMNL2Q96PY5 1086 aa14.56□□□□□ -0.08
VPS33B-201ENST00000333371 SCAND2PQ9GZW5 306 aaPredicted RBP14.56□□□□□ -0.08
VPS33B-201ENST00000333371 WDR17Q8IZU2 1322 aa14.56□□□□□ -0.08
VPS33B-201ENST00000333371 SCRN1Q12765 414 aa14.56□□□□□ -0.08
VPS33B-201ENST00000333371 USPL1Q5W0Q7 1092 aa14.56□□□□□ -0.08
VPS33B-201ENST00000333371 CCDC186Q7Z3E2 898 aa14.56□□□□□ -0.08
VPS33B-201ENST00000333371 COPRSQ9NQ92 184 aa14.56□□□□□ -0.08
VPS33B-201ENST00000333371 SOS2Q07890 1332 aaPredicted RBP14.56□□□□□ -0.08
VPS33B-201ENST00000333371 A0A087WZG4 1122 aa14.56□□□□□ -0.08
VPS33B-201ENST00000333371 RESTQ13127 1097 aa14.56□□□□□ -0.08
VPS33B-201ENST00000333371 CHST3Q7LGC8 479 aa14.56□□□□□ -0.08
VPS33B-201ENST00000333371 HMG20BQ9P0W2 317 aa14.56□□□□□ -0.08
VPS33B-201ENST00000333371 DRC7Q8IY82 874 aa14.55□□□□□ -0.08
VPS33B-201ENST00000333371 PRIMPOLQ96LW4 560 aa14.55□□□□□ -0.08
VPS33B-201ENST00000333371 MAP7D2Q96T17 732 aa14.55□□□□□ -0.08
VPS33B-201ENST00000333371 PRDM10Q9NQV6 1147 aa14.55□□□□□ -0.08
VPS33B-201ENST00000333371 H3BQV1 296 aa14.55□□□□□ -0.08
VPS33B-201ENST00000333371 CCT2P78371 535 aaKnown RBP14.55□□□□□ -0.08
VPS33B-201ENST00000333371 FGD1P98174 961 aa14.55□□□□□ -0.08
VPS33B-201ENST00000333371 TSGA10IPQ3SY00 556 aa14.55□□□□□ -0.08
VPS33B-201ENST00000333371 IFFO2Q5TF58 517 aa14.55□□□□□ -0.08
VPS33B-201ENST00000333371 NEUROD6Q96NK8 337 aa14.55□□□□□ -0.08
VPS33B-201ENST00000333371 CLSTN2Q9H4D0 955 aa14.55□□□□□ -0.08
VPS33B-201ENST00000333371 NAP1L2Q9ULW6 460 aaPredicted RBP14.55□□□□□ -0.08
VPS33B-201ENST00000333371 PARP4Q9UKK3 1724 aaKnown RBP14.55□□□□□ -0.08
VPS33B-201ENST00000333371 MRC1P22897 1456 aa14.54□□□□□ -0.08
VPS33B-201ENST00000333371 TIMM10P62072 90 aa14.54□□□□□ -0.08
VPS33B-201ENST00000333371 GUCY1B3Q02153 619 aa14.54□□□□□ -0.08
VPS33B-201ENST00000333371 APOBRQ0VD83 1088 aa14.54□□□□□ -0.08
VPS33B-201ENST00000333371 LMBR1LQ6UX01 489 aa14.54□□□□□ -0.08
VPS33B-201ENST00000333371 ZCRB1Q8TBF4 217 aaKnown RBP14.54□□□□□ -0.08
VPS33B-201ENST00000333371 TRIM5Q9C035 493 aa14.54□□□□□ -0.08
VPS33B-201ENST00000333371 BCL11BQ9C0K0 894 aaPredicted RBP14.54□□□□□ -0.08
VPS33B-201ENST00000333371 NCOA5Q9HCD5 579 aaKnown RBP14.54□□□□□ -0.08
VPS33B-201ENST00000333371 STRN4Q9NRL3 753 aa14.54□□□□□ -0.08
VPS33B-201ENST00000333371 GOLIM4O00461 696 aa14.54□□□□□ -0.08
VPS33B-201ENST00000333371 RIOK3O14730 519 aaKnown RBP14.54□□□□□ -0.08
VPS33B-201ENST00000333371 HMGN5P82970 282 aaKnown RBP14.54□□□□□ -0.08
VPS33B-201ENST00000333371 ERCC4Q92889 916 aaPredicted RBP14.54□□□□□ -0.08
VPS33B-201ENST00000333371 PKNOX2Q96KN3 472 aa14.54□□□□□ -0.08
VPS33B-201ENST00000333371 ALDH8A1Q9H2A2 487 aaPredicted RBP14.54□□□□□ -0.08
VPS33B-201ENST00000333371 PCDH11XQ9BZA7 1347 aa14.54□□□□□ -0.08
VPS33B-201ENST00000333371 PCDH11YQ9BZA8 1340 aa14.54□□□□□ -0.08
VPS33B-201ENST00000333371 EVA1CP58658 441 aa14.53□□□□□ -0.08
VPS33B-201ENST00000333371 MCMDC2Q4G0Z9 681 aa14.53□□□□□ -0.08
VPS33B-201ENST00000333371 ZNF165P49910 485 aa14.53□□□□□ -0.08
VPS33B-201ENST00000333371 BCL2L12Q9HB09 334 aa14.53□□□□□ -0.08
VPS33B-201ENST00000333371 ARFGEF2Q9Y6D5 1785 aa14.53□□□□□ -0.08
VPS33B-201ENST00000333371 CTDNEP1O95476 244 aa14.52□□□□□ -0.08
VPS33B-201ENST00000333371 HAUS7Q99871 368 aa14.52□□□□□ -0.08
VPS33B-201ENST00000333371 DDX19AQ9NUU7 478 aaKnown RBP14.52□□□□□ -0.08
VPS33B-201ENST00000333371 KIF3AQ9Y496 699 aa14.52□□□□□ -0.08
VPS33B-201ENST00000333371 FBXW7Q969H0 707 aa14.52□□□□□ -0.09
VPS33B-201ENST00000333371 ZNF594Q96JF6 807 aaPredicted RBP14.52□□□□□ -0.09
VPS33B-201ENST00000333371 COL5A2P05997 1499 aaPredicted RBP14.52□□□□□ -0.09
VPS33B-201ENST00000333371 MYH15Q9Y2K3 1946 aa14.52□□□□□ -0.09
VPS33B-201ENST00000333371 ZNF75DP51815 510 aa14.51□□□□□ -0.09
VPS33B-201ENST00000333371 KRT32Q14532 448 aa14.51□□□□□ -0.09
VPS33B-201ENST00000333371 RABL6Q3YEC7 729 aaPredicted RBP14.51□□□□□ -0.09
VPS33B-201ENST00000333371 C11orf57Q6ZUT1 292 aaPredicted RBP14.51□□□□□ -0.09
VPS33B-201ENST00000333371 U3KPZ7 1027 aaPredicted RBP14.51□□□□□ -0.09
VPS33B-201ENST00000333371 GOLGA6L6A8MZA4 724 aa14.51□□□□□ -0.09
VPS33B-201ENST00000333371 IL2RBP14784 551 aa14.51□□□□□ -0.09
VPS33B-201ENST00000333371 GTF2F1P35269 517 aaKnown RBP eCLIP14.51□□□□□ -0.09
VPS33B-201ENST00000333371 CCDC144BQ3MJ40 725 aa14.51□□□□□ -0.09
VPS33B-201ENST00000333371 RBM43Q6ZSC3 357 aaKnown RBP14.51□□□□□ -0.09
VPS33B-201ENST00000333371 CCDC144CPQ8IYA2 1237 aa14.51□□□□□ -0.09
VPS33B-201ENST00000333371 NSUN7Q8NE18 718 aaKnown RBP14.51□□□□□ -0.09
VPS33B-201ENST00000333371 C16orf45Q96MC5 204 aaPredicted RBP14.51□□□□□ -0.09
VPS33B-201ENST00000333371 GOLPH3LQ9H4A5 285 aa14.51□□□□□ -0.09
VPS33B-201ENST00000333371 ADD1P35611 737 aaKnown RBP14.51□□□□□ -0.09
VPS33B-201ENST00000333371 CASP7P55210 303 aa14.51□□□□□ -0.09
VPS33B-201ENST00000333371 ARID5BQ14865 1188 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms