RNA–Protein interactions for RNA: ENST00000329654.8

PDE4B-201, Transcript of phosphodiesterase 4B, humanhuman

TSL 1 (best) BASIC

Gene PDE4B, Length 3,998 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4B-201ENST00000329654 TJP1Q07157 1748 aa6.18□□□□□ -1.42
PDE4B-201ENST00000329654 GOLGA6L22H0YM25 854 aa6.17□□□□□ -1.42
PDE4B-201ENST00000329654 NOL10Q9BSC4 688 aaKnown RBP6.17□□□□□ -1.42
PDE4B-201ENST00000329654 NUCKS1Q9H1E3 243 aaKnown RBP6.17□□□□□ -1.42
PDE4B-201ENST00000329654 SBF2Q86WG5 1849 aa6.17□□□□□ -1.42
PDE4B-201ENST00000329654 DDX11L8A8MPP1 907 aa6.17□□□□□ -1.42
PDE4B-201ENST00000329654 SLC15A2Q16348 729 aa6.17□□□□□ -1.42
PDE4B-201ENST00000329654 TTC5Q8N0Z6 440 aa6.17□□□□□ -1.42
PDE4B-201ENST00000329654 GBP4Q96PP9 640 aa6.17□□□□□ -1.42
PDE4B-201ENST00000329654 SUDS3Q9H7L9 328 aaPredicted RBP6.17□□□□□ -1.42
PDE4B-201ENST00000329654 GRPEL1Q9HAV7 217 aa6.17□□□□□ -1.42
PDE4B-201ENST00000329654 PAXBP1Q9Y5B6 917 aa6.17□□□□□ -1.42
PDE4B-201ENST00000329654 NHSQ6T4R5 1651 aa6.17□□□□□ -1.42
PDE4B-201ENST00000329654 KCNQ3O43525 872 aa6.17□□□□□ -1.42
PDE4B-201ENST00000329654 MTFR1LQ9H019 292 aa6.17□□□□□ -1.42
PDE4B-201ENST00000329654 CXorf56Q9H5V9 222 aa6.17□□□□□ -1.42
PDE4B-201ENST00000329654 ATP10DQ9P241 1426 aa6.17□□□□□ -1.42
PDE4B-201ENST00000329654 ZNF280DQ6N043 979 aa6.16□□□□□ -1.42
PDE4B-201ENST00000329654 NFATC2IPQ8NCF5 419 aa6.16□□□□□ -1.42
PDE4B-201ENST00000329654 RBM42Q9BTD8 480 aaKnown RBP6.16□□□□□ -1.42
PDE4B-201ENST00000329654 ARFGEF2Q9Y6D5 1785 aa6.16□□□□□ -1.42
PDE4B-201ENST00000329654 KAT6BQ8WYB5 2073 aa6.16□□□□□ -1.42
PDE4B-201ENST00000329654 TPM3P06753 285 aa6.16□□□□□ -1.42
PDE4B-201ENST00000329654 TRDNQ13061 729 aa6.16□□□□□ -1.42
PDE4B-201ENST00000329654 APBB1IPQ7Z5R6 666 aaPredicted RBP6.16□□□□□ -1.42
PDE4B-201ENST00000329654 FEZ1Q99689 392 aa6.16□□□□□ -1.42
PDE4B-201ENST00000329654 ZBTB40Q9NUA8 1239 aa6.16□□□□□ -1.42
PDE4B-201ENST00000329654 COL5A3P25940 1745 aaPredicted RBP6.16□□□□□ -1.42
PDE4B-201ENST00000329654 ZBTB7BO15156 539 aaPredicted RBP6.16□□□□□ -1.42
PDE4B-201ENST00000329654 CD151P48509 253 aa6.16□□□□□ -1.42
PDE4B-201ENST00000329654 GPR162Q16538 588 aa6.16□□□□□ -1.42
PDE4B-201ENST00000329654 NOL8Q76FK4 1167 aaKnown RBP6.16□□□□□ -1.42
PDE4B-201ENST00000329654 SLFN14P0C7P3 912 aa6.16□□□□□ -1.42
PDE4B-201ENST00000329654 GET4Q7L5D6 327 aaPredicted RBP6.16□□□□□ -1.42
PDE4B-201ENST00000329654 TNPO1Q92973 898 aaKnown RBP6.16□□□□□ -1.42
PDE4B-201ENST00000329654 NEFHP12036 1026 aa6.15□□□□□ -1.42
PDE4B-201ENST00000329654 FOXD4Q12950 439 aaPredicted RBP6.15□□□□□ -1.42
PDE4B-201ENST00000329654 SF3A1Q15459 793 aaKnown RBP6.15□□□□□ -1.42
PDE4B-201ENST00000329654 HS1BP3Q53T59 392 aa6.15□□□□□ -1.42
PDE4B-201ENST00000329654 HDGFL1Q5TGJ6 251 aa6.15□□□□□ -1.42
PDE4B-201ENST00000329654 LRP10Q7Z4F1 713 aa6.15□□□□□ -1.42
PDE4B-201ENST00000329654 ANKRD33BA6NCL7 494 aa6.15□□□□□ -1.43
PDE4B-201ENST00000329654 PDIA6Q15084 440 aa6.15□□□□□ -1.43
PDE4B-201ENST00000329654 FMNL2Q96PY5 1086 aa6.15□□□□□ -1.43
PDE4B-201ENST00000329654 STK31Q9BXU1 1019 aa6.15□□□□□ -1.43
PDE4B-201ENST00000329654 TNNT1P13805 278 aa6.15□□□□□ -1.43
PDE4B-201ENST00000329654 RBM5P52756 815 aaKnown RBP eCLIP6.15□□□□□ -1.43
PDE4B-201ENST00000329654 CCDC173Q0VFZ6 552 aa6.15□□□□□ -1.43
PDE4B-201ENST00000329654 FLIIQ13045 1269 aa6.15□□□□□ -1.43
PDE4B-201ENST00000329654 RBM26Q5T8P6 1007 aaKnown RBP6.15□□□□□ -1.43
PDE4B-201ENST00000329654 CHD1LQ86WJ1 897 aa6.15□□□□□ -1.43
PDE4B-201ENST00000329654 CREBRFQ8IUR6 639 aa6.15□□□□□ -1.43
PDE4B-201ENST00000329654 ERCC4Q92889 916 aaPredicted RBP6.15□□□□□ -1.43
PDE4B-201ENST00000329654 PPP1R9BQ96SB3 815 aa6.15□□□□□ -1.43
PDE4B-201ENST00000329654 RASSF4Q9H2L5 321 aa6.15□□□□□ -1.43
PDE4B-201ENST00000329654 DBF4Q9UBU7 674 aaPredicted RBP6.15□□□□□ -1.43
PDE4B-201ENST00000329654 LY75O60449 1722 aa6.15□□□□□ -1.43
PDE4B-201ENST00000329654 TESPA1A2RU30 521 aaPredicted RBP6.14□□□□□ -1.43
PDE4B-201ENST00000329654 ZBTB7AO95365 584 aa6.14□□□□□ -1.43
PDE4B-201ENST00000329654 SNRPA1P09661 255 aaKnown RBP6.14□□□□□ -1.43
PDE4B-201ENST00000329654 GSCP56915 257 aaPredicted RBP6.14□□□□□ -1.43
PDE4B-201ENST00000329654 G2E3Q7L622 706 aa6.14□□□□□ -1.43
PDE4B-201ENST00000329654 ZNF710Q8N1W2 664 aa6.14□□□□□ -1.43
PDE4B-201ENST00000329654 ANTXR1Q9H6X2 564 aa6.14□□□□□ -1.43
PDE4B-201ENST00000329654 DDX49Q9Y6V7 483 aaKnown RBP6.14□□□□□ -1.43
PDE4B-201ENST00000329654 GRIN3BO60391 1043 aa6.14□□□□□ -1.43
PDE4B-201ENST00000329654 CCT4P50991 539 aaKnown RBP6.14□□□□□ -1.43
PDE4B-201ENST00000329654 MYRIPQ8NFW9 859 aa6.14□□□□□ -1.43
PDE4B-201ENST00000329654 ZNF496Q96IT1 587 aaPredicted RBP6.14□□□□□ -1.43
PDE4B-201ENST00000329654 DDX21Q9NR30 783 aaKnown RBP eCLIP6.14□□□□□ -1.43
PDE4B-201ENST00000329654 HYPKQ9NX55 129 aa6.14□□□□□ -1.43
PDE4B-201ENST00000329654 RTCBQ9Y3I0 505 aaKnown RBP6.14□□□□□ -1.43
PDE4B-201ENST00000329654 H0YHG0 523 aa6.14□□□□□ -1.43
PDE4B-201ENST00000329654 ERCC3P19447 782 aa6.14□□□□□ -1.43
PDE4B-201ENST00000329654 GTF2F1P35269 517 aaKnown RBP eCLIP6.14□□□□□ -1.43
PDE4B-201ENST00000329654 ATP6V1AP38606 617 aa6.14□□□□□ -1.43
PDE4B-201ENST00000329654 RHBDL3P58872 404 aa6.14□□□□□ -1.43
PDE4B-201ENST00000329654 SARNPP82979 210 aaKnown RBP6.14□□□□□ -1.43
PDE4B-201ENST00000329654 CCDC91Q7Z6B0 441 aa6.14□□□□□ -1.43
PDE4B-201ENST00000329654 TEX13AQ9BXU3 409 aaPredicted RBP6.14□□□□□ -1.43
PDE4B-201ENST00000329654 AFDNP55196 1824 aaKnown RBP6.13□□□□□ -1.43
PDE4B-201ENST00000329654 ANKRD36CQ5JPF3 1778 aa6.13□□□□□ -1.43
PDE4B-201ENST00000329654 ADCY9O60503 1353 aa6.13□□□□□ -1.43
PDE4B-201ENST00000329654 CCDC196A0A1B0GTZ2 297 aa6.13□□□□□ -1.43
PDE4B-201ENST00000329654 STARD3NLO95772 234 aa6.13□□□□□ -1.43
PDE4B-201ENST00000329654 RFC4P35249 363 aa6.13□□□□□ -1.43
PDE4B-201ENST00000329654 CXorf38Q8TB03 319 aa6.13□□□□□ -1.43
PDE4B-201ENST00000329654 RANBP17Q9H2T7 1088 aaKnown RBP6.13□□□□□ -1.43
PDE4B-201ENST00000329654 OGFRQ9NZT2 677 aa6.13□□□□□ -1.43
PDE4B-201ENST00000329654 CEP126Q9P2H0 1117 aa6.13□□□□□ -1.43
PDE4B-201ENST00000329654 BTAF1O14981 1849 aa6.13□□□□□ -1.43
PDE4B-201ENST00000329654 BRWD3Q6RI45 1802 aa6.13□□□□□ -1.43
PDE4B-201ENST00000329654 SLC39A6Q13433 755 aa6.13□□□□□ -1.43
PDE4B-201ENST00000329654 KRBA2Q6ZNG9 492 aa6.13□□□□□ -1.43
PDE4B-201ENST00000329654 FAM184AQ8NB25 1140 aa6.13□□□□□ -1.43
PDE4B-201ENST00000329654 ACRBPQ8NEB7 543 aa6.13□□□□□ -1.43
PDE4B-201ENST00000329654 TBC1D22AQ8WUA7 517 aa6.13□□□□□ -1.43
PDE4B-201ENST00000329654 PIGBQ92521 554 aa6.13□□□□□ -1.43
PDE4B-201ENST00000329654 CHPF2Q9P2E5 772 aa6.13□□□□□ -1.43
PDE4B-201ENST00000329654 ABCD1P33897 745 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms