RNA–Protein interactions for RNA: ENST00000323418.10

ME3-201, Transcript of malic enzyme 3, humanhuman

TSL 5 BASIC

Gene ME3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-201ENST00000323418 A0A1B0GUL6 1792 aa27.23■■□□□ 1.95
ME3-201ENST00000323418 PSMD14O00487 310 aa27.23■■□□□ 1.95
ME3-201ENST00000323418 SLC4A2P04920 1241 aa27.23■■□□□ 1.95
ME3-201ENST00000323418 CTSWP56202 376 aa27.23■■□□□ 1.95
ME3-201ENST00000323418 CST9Q5W186 159 aa27.23■■□□□ 1.95
ME3-201ENST00000323418 CCDC85AQ96PX6 553 aaPredicted RBP27.23■■□□□ 1.95
ME3-201ENST00000323418 KCNQ5Q9NR82 932 aa27.23■■□□□ 1.95
ME3-201ENST00000323418 ECE2O60344 883 aa27.22■■□□□ 1.95
ME3-201ENST00000323418 EYA3Q99504 573 aa27.22■■□□□ 1.95
ME3-201ENST00000323418 BCL2L13Q9BXK5 485 aa27.22■■□□□ 1.95
ME3-201ENST00000323418 CNOT7Q9UIV1 285 aaKnown RBP27.22■■□□□ 1.95
ME3-201ENST00000323418 ZBTB12Q9Y330 459 aaPredicted RBP27.22■■□□□ 1.95
ME3-201ENST00000323418 VAMP4O75379 141 aa27.21■■□□□ 1.95
ME3-201ENST00000323418 FLIIQ13045 1269 aa27.21■■□□□ 1.95
ME3-201ENST00000323418 DEFB115Q30KQ5 88 aa27.21■■□□□ 1.95
ME3-201ENST00000323418 TTLL11Q8NHH1 800 aa27.21■■□□□ 1.95
ME3-201ENST00000323418 DPF2Q92785 391 aa27.21■■□□□ 1.95
ME3-201ENST00000323418 SPINK5Q9NQ38 1064 aaPredicted RBP27.21■■□□□ 1.95
ME3-201ENST00000323418 H7C1W4 665 aa27.2■■□□□ 1.94
ME3-201ENST00000323418 ZNF609O15014 1411 aa27.2■■□□□ 1.94
ME3-201ENST00000323418 DOK7Q18PE1 504 aa27.2■■□□□ 1.94
ME3-201ENST00000323418 MICALL2Q8IY33 904 aa27.2■■□□□ 1.94
ME3-201ENST00000323418 NEXNQ0ZGT2 675 aa27.19■■□□□ 1.94
ME3-201ENST00000323418 ZC3H15Q8WU90 426 aaKnown RBP27.19■■□□□ 1.94
ME3-201ENST00000323418 SALL2Q9Y467 1007 aaPredicted RBP27.19■■□□□ 1.94
ME3-201ENST00000323418 FOXN1O15353 648 aa27.18■■□□□ 1.94
ME3-201ENST00000323418 UFL1O94874 794 aa27.18■■□□□ 1.94
ME3-201ENST00000323418 CASP7P55210 303 aa27.18■■□□□ 1.94
ME3-201ENST00000323418 EXOSC9Q06265 439 aaKnown RBP27.18■■□□□ 1.94
ME3-201ENST00000323418 ANKRD18AQ8IVF6 992 aa27.18■■□□□ 1.94
ME3-201ENST00000323418 GLIS2Q9BZE0 524 aaPredicted RBP27.18■■□□□ 1.94
ME3-201ENST00000323418 GGA1Q9UJY5 639 aa27.18■■□□□ 1.94
ME3-201ENST00000323418 GREM2Q9H772 168 aa27.17■■□□□ 1.94
ME3-201ENST00000323418 ABT1Q9ULW3 272 aaKnown RBP27.17■■□□□ 1.94
ME3-201ENST00000323418 XDHP47989 1333 aa27.16■■□□□ 1.94
ME3-201ENST00000323418 WDR33Q9C0J8 1336 aaKnown RBP27.16■■□□□ 1.94
ME3-201ENST00000323418 EGFRP00533 1210 aa27.16■■□□□ 1.94
ME3-201ENST00000323418 UBE3BQ7Z3V4 1068 aa27.16■■□□□ 1.94
ME3-201ENST00000323418 PLA2G12BQ9BX93 195 aa27.16■■□□□ 1.94
ME3-201ENST00000323418 ZC3H12CQ9C0D7 883 aaKnown RBP27.16■■□□□ 1.94
ME3-201ENST00000323418 ANKIB1Q9P2G1 1089 aa27.16■■□□□ 1.94
ME3-201ENST00000323418 TLL2Q9Y6L7 1015 aa27.16■■□□□ 1.94
ME3-201ENST00000323418 RPS12P25398 132 aaKnown RBP27.15■■□□□ 1.94
ME3-201ENST00000323418 GCKRQ14397 625 aa27.15■■□□□ 1.94
ME3-201ENST00000323418 SAMD7Q7Z3H4 446 aa27.15■■□□□ 1.94
ME3-201ENST00000323418 WBP1LQ9NX94 342 aa27.15■■□□□ 1.94
ME3-201ENST00000323418 H7C1D1 291 aa27.14■■□□□ 1.94
ME3-201ENST00000323418 VIL1P09327 827 aaKnown RBP27.14■■□□□ 1.94
ME3-201ENST00000323418 DNAAF4Q8WXU2 420 aa27.14■■□□□ 1.94
ME3-201ENST00000323418 CDC5LQ99459 802 aaKnown RBP27.14■■□□□ 1.94
ME3-201ENST00000323418 WTIPA6NIX2 430 aaPredicted RBP27.13■■□□□ 1.93
ME3-201ENST00000323418 FKBP5Q13451 457 aaPredicted RBP27.13■■□□□ 1.93
ME3-201ENST00000323418 BSDC1Q9NW68 430 aaPredicted RBP27.13■■□□□ 1.93
ME3-201ENST00000323418 TNS4Q8IZW8 715 aa27.12■■□□□ 1.93
ME3-201ENST00000323418 LINS1Q8NG48 757 aa27.12■■□□□ 1.93
ME3-201ENST00000323418 MINPP1Q9UNW1 487 aa27.12■■□□□ 1.93
ME3-201ENST00000323418 CELF2O95319 508 aaKnown RBP27.11■■□□□ 1.93
ME3-201ENST00000323418 ATP2B4P23634 1241 aa27.11■■□□□ 1.93
ME3-201ENST00000323418 TBC1D10BQ4KMP7 808 aaPredicted RBP27.11■■□□□ 1.93
ME3-201ENST00000323418 CDC37L1Q7L3B6 337 aa27.11■■□□□ 1.93
ME3-201ENST00000323418 ZNF521Q96K83 1311 aa27.11■■□□□ 1.93
ME3-201ENST00000323418 MED23Q9ULK4 1368 aa27.1■■□□□ 1.93
ME3-201ENST00000323418 CSF1RP07333 972 aa27.1■■□□□ 1.93
ME3-201ENST00000323418 CYP4F22Q6NT55 531 aa27.1■■□□□ 1.93
ME3-201ENST00000323418 SAPCD2Q86UD0 394 aa27.1■■□□□ 1.93
ME3-201ENST00000323418 FAM9BQ8IZU0 186 aa27.1■■□□□ 1.93
ME3-201ENST00000323418 CAPNS2Q96L46 248 aa27.1■■□□□ 1.93
ME3-201ENST00000323418 FAM161AQ3B820 660 aa27.08■■□□□ 1.93
ME3-201ENST00000323418 DLK2Q6UY11 383 aa27.08■■□□□ 1.93
ME3-201ENST00000323418 GMLQ99445 158 aa27.08■■□□□ 1.93
ME3-201ENST00000323418 MYH16Q9H6N6 1097 aa27.08■■□□□ 1.93
ME3-201ENST00000323418 RSBN1LQ6PCB5 846 aaPredicted RBP27.07■■□□□ 1.92
ME3-201ENST00000323418 PRDM10Q9NQV6 1147 aa27.07■■□□□ 1.92
ME3-201ENST00000323418 F6X3S4 739 aa27.06■■□□□ 1.92
ME3-201ENST00000323418 CCT4P50991 539 aaKnown RBP27.06■■□□□ 1.92
ME3-201ENST00000323418 ZNF280AP59817 542 aaPredicted RBP27.06■■□□□ 1.92
ME3-201ENST00000323418 KIF4BQ2VIQ3 1234 aa27.06■■□□□ 1.92
ME3-201ENST00000323418 BEND3Q5T5X7 828 aa27.06■■□□□ 1.92
ME3-201ENST00000323418 USP48Q86UV5 1035 aa27.06■■□□□ 1.92
ME3-201ENST00000323418 HHIPL1Q96JK4 782 aa27.06■■□□□ 1.92
ME3-201ENST00000323418 ITGA6P23229 1130 aa27.05■■□□□ 1.92
ME3-201ENST00000323418 ECE1P42892 770 aa27.05■■□□□ 1.92
ME3-201ENST00000323418 CTCFP49711 727 aaPredicted RBP27.05■■□□□ 1.92
ME3-201ENST00000323418 PODNQ7Z5L7 613 aa27.05■■□□□ 1.92
ME3-201ENST00000323418 AGBL3Q8NEM8 1001 aa27.05■■□□□ 1.92
ME3-201ENST00000323418 HSPA8P11142 646 aaKnown RBP27.04■■□□□ 1.92
ME3-201ENST00000323418 MAP2K1Q02750 393 aaPredicted RBP27.04■■□□□ 1.92
ME3-201ENST00000323418 AIDAQ96BJ3 306 aa27.04■■□□□ 1.92
ME3-201ENST00000323418 G3V3G9 751 aa27.03■■□□□ 1.92
ME3-201ENST00000323418 ASTN2O75129 1339 aaPredicted RBP27.03■■□□□ 1.92
ME3-201ENST00000323418 FOXO4P98177 505 aa27.03■■□□□ 1.92
ME3-201ENST00000323418 RBM26Q5T8P6 1007 aaKnown RBP27.03■■□□□ 1.92
ME3-201ENST00000323418 DCAF8Q5TAQ9 597 aa27.03■■□□□ 1.92
ME3-201ENST00000323418 TXNRD3Q86VQ6 643 aa27.03■■□□□ 1.92
ME3-201ENST00000323418 ADM5C9JUS6 153 aa27.02■■□□□ 1.92
ME3-201ENST00000323418 IGHMBP2P38935 993 aaKnown RBP27.02■■□□□ 1.92
ME3-201ENST00000323418 KRT26Q7Z3Y9 468 aa27.02■■□□□ 1.92
ME3-201ENST00000323418 ZNF408Q9H9D4 720 aa27.02■■□□□ 1.92
ME3-201ENST00000323418 IRS2Q9Y4H2 1338 aa27.01■■□□□ 1.91
ME3-201ENST00000323418 USP17L3A6NCW0 530 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms