RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 TJP1Q07157 1748 aa10.28□□□□□ -0.76
CLK1-201ENST00000321356 NUP188Q5SRE5 1749 aa10.28□□□□□ -0.76
CLK1-201ENST00000321356 GOLGA6L4A6NEF3 574 aa10.28□□□□□ -0.76
CLK1-201ENST00000321356 NR1I2O75469 434 aa10.28□□□□□ -0.76
CLK1-201ENST00000321356 TATP17735 454 aaPredicted RBP10.28□□□□□ -0.76
CLK1-201ENST00000321356 Q6ZUG5 572 aa10.28□□□□□ -0.76
CLK1-201ENST00000321356 UBE3BQ7Z3V4 1068 aa10.28□□□□□ -0.76
CLK1-201ENST00000321356 LUZP1Q86V48 1076 aa10.28□□□□□ -0.76
CLK1-201ENST00000321356 PLA2G4DQ86XP0 818 aa10.28□□□□□ -0.76
CLK1-201ENST00000321356 CKAP2LQ8IYA6 745 aa10.28□□□□□ -0.76
CLK1-201ENST00000321356 IFNL2Q8IZJ0 200 aa10.28□□□□□ -0.76
CLK1-201ENST00000321356 ZNF710Q8N1W2 664 aa10.28□□□□□ -0.76
CLK1-201ENST00000321356 KBTBD3Q8NAB2 608 aa10.28□□□□□ -0.76
CLK1-201ENST00000321356 SEC62Q99442 399 aaKnown RBP10.28□□□□□ -0.76
CLK1-201ENST00000321356 LLPHQ9BRT6 129 aaKnown RBP10.28□□□□□ -0.76
CLK1-201ENST00000321356 AGXT2Q9BYV1 514 aa10.28□□□□□ -0.76
CLK1-201ENST00000321356 ZMYND15Q9H091 742 aa10.28□□□□□ -0.76
CLK1-201ENST00000321356 ZSCAN16Q9H4T2 348 aaPredicted RBP10.28□□□□□ -0.76
CLK1-201ENST00000321356 CHMP3Q9Y3E7 222 aa10.28□□□□□ -0.76
CLK1-201ENST00000321356 USP16Q9Y5T5 823 aa10.28□□□□□ -0.76
CLK1-201ENST00000321356 SPEF2Q9C093 1822 aa10.28□□□□□ -0.76
CLK1-201ENST00000321356 PFKFB2O60825 505 aa10.27□□□□□ -0.76
CLK1-201ENST00000321356 CAVIN2O95810 425 aa10.27□□□□□ -0.76
CLK1-201ENST00000321356 CHGBP05060 677 aa10.27□□□□□ -0.76
CLK1-201ENST00000321356 HMGB1P09429 215 aaKnown RBP10.27□□□□□ -0.76
CLK1-201ENST00000321356 ADD1P35611 737 aaKnown RBP10.27□□□□□ -0.76
CLK1-201ENST00000321356 CCDC129Q6ZRS4 1044 aa10.27□□□□□ -0.76
CLK1-201ENST00000321356 STOX1Q6ZVD7 989 aa10.27□□□□□ -0.76
CLK1-201ENST00000321356 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.27□□□□□ -0.76
CLK1-201ENST00000321356 SPC24Q8NBT2 197 aa10.27□□□□□ -0.76
CLK1-201ENST00000321356 DCAF5Q96JK2 942 aa10.27□□□□□ -0.76
CLK1-201ENST00000321356 FMNL2Q96PY5 1086 aa10.27□□□□□ -0.76
CLK1-201ENST00000321356 CYP27B1O15528 508 aa10.27□□□□□ -0.77
CLK1-201ENST00000321356 ZNF75DP51815 510 aa10.27□□□□□ -0.77
CLK1-201ENST00000321356 ZC3H6P61129 1189 aaKnown RBP10.27□□□□□ -0.77
CLK1-201ENST00000321356 SCRN1Q12765 414 aa10.27□□□□□ -0.77
CLK1-201ENST00000321356 NAA16Q6N069 864 aaPredicted RBP10.27□□□□□ -0.77
CLK1-201ENST00000321356 PLBD2Q8NHP8 589 aa10.27□□□□□ -0.77
CLK1-201ENST00000321356 JARID2Q92833 1246 aaPredicted RBP10.27□□□□□ -0.77
CLK1-201ENST00000321356 DNAJC2Q99543 621 aaKnown RBP10.27□□□□□ -0.77
CLK1-201ENST00000321356 GPR108Q9NPR9 543 aa10.27□□□□□ -0.77
CLK1-201ENST00000321356 NLRP2Q9NX02 1062 aa10.27□□□□□ -0.77
CLK1-201ENST00000321356 NDUFB9Q9Y6M9 179 aa10.27□□□□□ -0.77
CLK1-201ENST00000321356 A0A087WZG4 1122 aa10.26□□□□□ -0.77
CLK1-201ENST00000321356 H7C1W4 665 aa10.26□□□□□ -0.77
CLK1-201ENST00000321356 PTGS1P23219 599 aa10.26□□□□□ -0.77
CLK1-201ENST00000321356 FOXO4P98177 505 aa10.26□□□□□ -0.77
CLK1-201ENST00000321356 DDX46Q7L014 1031 aaKnown RBP10.26□□□□□ -0.77
CLK1-201ENST00000321356 DHX32Q7L7V1 743 aaKnown RBP10.26□□□□□ -0.77
CLK1-201ENST00000321356 ATG9AQ7Z3C6 839 aa10.26□□□□□ -0.77
CLK1-201ENST00000321356 TTC5Q8N0Z6 440 aa10.26□□□□□ -0.77
CLK1-201ENST00000321356 NSUN7Q8NE18 718 aaKnown RBP10.26□□□□□ -0.77
CLK1-201ENST00000321356 DSCC1Q9BVC3 393 aa10.26□□□□□ -0.77
CLK1-201ENST00000321356 HELLSQ9NRZ9 838 aa10.26□□□□□ -0.77
CLK1-201ENST00000321356 RCOR1Q9UKL0 485 aa10.26□□□□□ -0.77
CLK1-201ENST00000321356 CFAP45Q9UL16 551 aa10.26□□□□□ -0.77
CLK1-201ENST00000321356 KIF3AQ9Y496 699 aa10.26□□□□□ -0.77
CLK1-201ENST00000321356 UBR2Q8IWV8 1755 aa10.26□□□□□ -0.77
CLK1-201ENST00000321356 H3BQV1 296 aa10.25□□□□□ -0.77
CLK1-201ENST00000321356 CTDNEP1O95476 244 aa10.25□□□□□ -0.77
CLK1-201ENST00000321356 ZNF165P49910 485 aa10.25□□□□□ -0.77
CLK1-201ENST00000321356 EXOSC10Q01780 885 aaKnown RBP10.25□□□□□ -0.77
CLK1-201ENST00000321356 IFFO2Q5TF58 517 aa10.25□□□□□ -0.77
CLK1-201ENST00000321356 LMBR1LQ6UX01 489 aa10.25□□□□□ -0.77
CLK1-201ENST00000321356 BICD2Q8TD16 824 aa10.25□□□□□ -0.77
CLK1-201ENST00000321356 CCDC94Q9BW85 323 aaPredicted RBP10.25□□□□□ -0.77
CLK1-201ENST00000321356 SALL1Q9NSC2 1324 aa10.25□□□□□ -0.77
CLK1-201ENST00000321356 ATP5J2-PTCD1G3V325 749 aa10.25□□□□□ -0.77
CLK1-201ENST00000321356 PTCD1O75127 700 aaKnown RBP10.25□□□□□ -0.77
CLK1-201ENST00000321356 HSP90B1P14625 803 aaKnown RBP10.25□□□□□ -0.77
CLK1-201ENST00000321356 CDC25BP30305 580 aa10.25□□□□□ -0.77
CLK1-201ENST00000321356 PIP4K2AP48426 406 aaPredicted RBP10.25□□□□□ -0.77
CLK1-201ENST00000321356 ZMYM1Q5SVZ6 1142 aa10.25□□□□□ -0.77
CLK1-201ENST00000321356 ATL3Q6DD88 541 aa10.25□□□□□ -0.77
CLK1-201ENST00000321356 SARM1Q6SZW1 724 aa10.25□□□□□ -0.77
CLK1-201ENST00000321356 CCDC186Q7Z3E2 898 aa10.25□□□□□ -0.77
CLK1-201ENST00000321356 TSC1Q92574 1164 aa10.25□□□□□ -0.77
CLK1-201ENST00000321356 DDX11Q96FC9 970 aa10.25□□□□□ -0.77
CLK1-201ENST00000321356 DNAJC25Q9H1X3 360 aa10.25□□□□□ -0.77
CLK1-201ENST00000321356 CTAGE5O15320 804 aa10.24□□□□□ -0.77
CLK1-201ENST00000321356 CTIFO43310 598 aaKnown RBP10.24□□□□□ -0.77
CLK1-201ENST00000321356 IQCB1Q15051 598 aa10.24□□□□□ -0.77
CLK1-201ENST00000321356 FBXL16Q8N461 479 aa10.24□□□□□ -0.77
CLK1-201ENST00000321356 LRRC2Q9BYS8 371 aa10.24□□□□□ -0.77
CLK1-201ENST00000321356 PAG1Q9NWQ8 432 aa10.24□□□□□ -0.77
CLK1-201ENST00000321356 DDX60Q8IY21 1712 aaKnown RBP10.24□□□□□ -0.77
CLK1-201ENST00000321356 PTPDC1A2A3K4 754 aa10.23□□□□□ -0.77
CLK1-201ENST00000321356 RIOK3O14730 519 aaKnown RBP10.23□□□□□ -0.77
CLK1-201ENST00000321356 ZSCAN25Q6NSZ9 544 aa10.23□□□□□ -0.77
CLK1-201ENST00000321356 TRIM5Q9C035 493 aa10.23□□□□□ -0.77
CLK1-201ENST00000321356 C19orf44Q9H6X5 657 aa10.23□□□□□ -0.77
CLK1-201ENST00000321356 BCL2L12Q9HB09 334 aa10.23□□□□□ -0.77
CLK1-201ENST00000321356 PAPPAQ13219 1627 aa10.23□□□□□ -0.77
CLK1-201ENST00000321356 NBPF26B4DH59 902 aa10.23□□□□□ -0.77
CLK1-201ENST00000321356 GOLIM4O00461 696 aa10.23□□□□□ -0.77
CLK1-201ENST00000321356 IL15P40933 162 aaPredicted RBP10.23□□□□□ -0.77
CLK1-201ENST00000321356 EVCP57679 992 aa10.23□□□□□ -0.77
CLK1-201ENST00000321356 CACNB1Q02641 598 aaPredicted RBP10.23□□□□□ -0.77
CLK1-201ENST00000321356 APOBRQ0VD83 1088 aa10.23□□□□□ -0.77
CLK1-201ENST00000321356 LRMPQ12912 555 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms