RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 IQCEQ6IPM2 695 aa19.09■□□□□ 0.65
PACS1-201ENST00000320580 RPAINQ86UA6 219 aa19.09■□□□□ 0.65
PACS1-201ENST00000320580 FAM76AQ8TAV0 307 aa19.09■□□□□ 0.65
PACS1-201ENST00000320580 ECHDC1Q9NTX5 307 aa19.09■□□□□ 0.65
PACS1-201ENST00000320580 FLIIQ13045 1269 aa19.09■□□□□ 0.65
PACS1-201ENST00000320580 CCDC8Q9H0W5 538 aaPredicted RBP19.09■□□□□ 0.65
PACS1-201ENST00000320580 ATP10AO60312 1499 aa19.09■□□□□ 0.65
PACS1-201ENST00000320580 ATP8B2P98198 1209 aa19.09■□□□□ 0.65
PACS1-201ENST00000320580 FANCCQ00597 558 aa19.09■□□□□ 0.65
PACS1-201ENST00000320580 SGSM2O43147 1006 aa19.08■□□□□ 0.65
PACS1-201ENST00000320580 ZEB2O60315 1214 aa19.08■□□□□ 0.65
PACS1-201ENST00000320580 FAM160A1Q05DH4 1040 aa19.08■□□□□ 0.65
PACS1-201ENST00000320580 AIMP1Q12904 312 aaKnown RBP19.08■□□□□ 0.65
PACS1-201ENST00000320580 RGS22Q8NE09 1264 aa19.08■□□□□ 0.65
PACS1-201ENST00000320580 FYB1O15117 783 aa19.08■□□□□ 0.64
PACS1-201ENST00000320580 EZRP15311 586 aaKnown RBP19.08■□□□□ 0.64
PACS1-201ENST00000320580 NAA25Q14CX7 972 aa19.08■□□□□ 0.64
PACS1-201ENST00000320580 SRLQ86TD4 932 aa19.08■□□□□ 0.64
PACS1-201ENST00000320580 CNNM3Q8NE01 707 aa19.08■□□□□ 0.64
PACS1-201ENST00000320580 ABCC4O15439 1325 aa19.08■□□□□ 0.64
PACS1-201ENST00000320580 EIF3CLB5ME19 914 aaKnown RBP19.08■□□□□ 0.64
PACS1-201ENST00000320580 WASHC4Q2M389 1173 aa19.08■□□□□ 0.64
PACS1-201ENST00000320580 EIF3CQ99613 913 aaKnown RBP19.08■□□□□ 0.64
PACS1-201ENST00000320580 FAN1Q9Y2M0 1017 aa19.08■□□□□ 0.64
PACS1-201ENST00000320580 NPATQ14207 1427 aa19.08■□□□□ 0.64
PACS1-201ENST00000320580 NEBLO76041 1014 aa19.07■□□□□ 0.64
PACS1-201ENST00000320580 CCDC172P0C7W6 258 aa19.07■□□□□ 0.64
PACS1-201ENST00000320580 LRCH2Q5VUJ6 765 aa19.07■□□□□ 0.64
PACS1-201ENST00000320580 ZFYVE16Q7Z3T8 1539 aa19.07■□□□□ 0.64
PACS1-201ENST00000320580 PSDA5PKW4 1024 aaPredicted RBP19.07■□□□□ 0.64
PACS1-201ENST00000320580 SSBP05455 408 aaKnown RBP eCLIP19.07■□□□□ 0.64
PACS1-201ENST00000320580 BRD3Q15059 726 aa19.07■□□□□ 0.64
PACS1-201ENST00000320580 ME3Q16798 604 aa19.07■□□□□ 0.64
PACS1-201ENST00000320580 ATRIPQ8WXE1 791 aa19.07■□□□□ 0.64
PACS1-201ENST00000320580 NEK1Q96PY6 1258 aa19.07■□□□□ 0.64
PACS1-201ENST00000320580 EPC1Q9H2F5 836 aa19.07■□□□□ 0.64
PACS1-201ENST00000320580 ZNHIT6Q9NWK9 470 aaKnown RBP19.07■□□□□ 0.64
PACS1-201ENST00000320580 EIF2AK4Q9P2K8 1649 aaKnown RBP19.07■□□□□ 0.64
PACS1-201ENST00000320580 NEXNQ0ZGT2 675 aa19.07■□□□□ 0.64
PACS1-201ENST00000320580 CREB3L3Q68CJ9 461 aa19.07■□□□□ 0.64
PACS1-201ENST00000320580 MCTP2Q6DN12 878 aa19.07■□□□□ 0.64
PACS1-201ENST00000320580 C11orf57Q6ZUT1 292 aaPredicted RBP19.07■□□□□ 0.64
PACS1-201ENST00000320580 SCLT1Q96NL6 688 aa19.07■□□□□ 0.64
PACS1-201ENST00000320580 CDC25BP30305 580 aa19.06■□□□□ 0.64
PACS1-201ENST00000320580 EVI5LQ96CN4 794 aa19.06■□□□□ 0.64
PACS1-201ENST00000320580 UGGT1Q9NYU2 1555 aa19.06■□□□□ 0.64
PACS1-201ENST00000320580 RBM6P78332 1123 aaKnown RBP19.06■□□□□ 0.64
PACS1-201ENST00000320580 PPP2R5AQ15172 486 aa19.06■□□□□ 0.64
PACS1-201ENST00000320580 POTEDQ86YR6 584 aa19.06■□□□□ 0.64
PACS1-201ENST00000320580 NUTM2GQ5VZR2 741 aa19.05■□□□□ 0.64
PACS1-201ENST00000320580 PIP4K2BP78356 416 aa19.05■□□□□ 0.64
PACS1-201ENST00000320580 AK9Q5TCS8 1911 aa19.05■□□□□ 0.64
PACS1-201ENST00000320580 MATR3P43243 847 aaKnown RBP eCLIP19.05■□□□□ 0.64
PACS1-201ENST00000320580 SYKP43405 635 aa19.05■□□□□ 0.64
PACS1-201ENST00000320580 SLC20A2Q08357 652 aa19.05■□□□□ 0.64
PACS1-201ENST00000320580 PLA2R1Q13018 1463 aa19.05■□□□□ 0.64
PACS1-201ENST00000320580 NDUFAB1O14561 156 aa19.04■□□□□ 0.64
PACS1-201ENST00000320580 PARD6BQ9BYG5 372 aa19.04■□□□□ 0.64
PACS1-201ENST00000320580 EFCAB13Q8IY85 973 aa19.04■□□□□ 0.64
PACS1-201ENST00000320580 RASEFQ8IZ41 740 aa19.04■□□□□ 0.64
PACS1-201ENST00000320580 GDAP1L1Q96MZ0 367 aa19.04■□□□□ 0.64
PACS1-201ENST00000320580 TNRQ92752 1358 aa19.04■□□□□ 0.64
PACS1-201ENST00000320580 ARHGAP6O43182 974 aa19.04■□□□□ 0.64
PACS1-201ENST00000320580 NCBP3Q53F19 620 aaKnown RBP19.04■□□□□ 0.64
PACS1-201ENST00000320580 MMS22LQ6ZRQ5 1243 aa19.04■□□□□ 0.64
PACS1-201ENST00000320580 NUP88Q99567 741 aaPredicted RBP19.04■□□□□ 0.64
PACS1-201ENST00000320580 CAPN7Q9Y6W3 813 aa19.04■□□□□ 0.64
PACS1-201ENST00000320580 A0A1B0GUA9 196 aa19.04■□□□□ 0.64
PACS1-201ENST00000320580 MYCNP04198 464 aaPredicted RBP19.04■□□□□ 0.64
PACS1-201ENST00000320580 MLH3Q9UHC1 1453 aa19.03■□□□□ 0.64
PACS1-201ENST00000320580 CLNS1AP54105 237 aaKnown RBP19.03■□□□□ 0.64
PACS1-201ENST00000320580 PLA2G4DQ86XP0 818 aa19.03■□□□□ 0.64
PACS1-201ENST00000320580 CTCFLQ8NI51 663 aaPredicted RBP19.03■□□□□ 0.64
PACS1-201ENST00000320580 CCDC114Q96M63 670 aa19.03■□□□□ 0.64
PACS1-201ENST00000320580 A0A087WUV0 522 aaPredicted RBP19.03■□□□□ 0.64
PACS1-201ENST00000320580 MARCKSP29966 332 aaPredicted RBP19.03■□□□□ 0.64
PACS1-201ENST00000320580 RABGGTAQ92696 567 aa19.03■□□□□ 0.64
PACS1-201ENST00000320580 GEMIN8Q9NWZ8 242 aaKnown RBP19.03■□□□□ 0.64
PACS1-201ENST00000320580 Q6ZUG5 572 aa19.02■□□□□ 0.64
PACS1-201ENST00000320580 ABCA9Q8IUA7 1624 aa19.02■□□□□ 0.64
PACS1-201ENST00000320580 KDM5DQ9BY66 1539 aa19.02■□□□□ 0.64
PACS1-201ENST00000320580 GOLIM4O00461 696 aa19.02■□□□□ 0.64
PACS1-201ENST00000320580 CCT5P48643 541 aa19.02■□□□□ 0.64
PACS1-201ENST00000320580 FAM204AQ9H8W3 233 aa19.02■□□□□ 0.64
PACS1-201ENST00000320580 TUBBP07437 444 aa19.02■□□□□ 0.63
PACS1-201ENST00000320580 TXLNAP40222 546 aa19.02■□□□□ 0.63
PACS1-201ENST00000320580 CC2D1AQ6P1N0 951 aaPredicted RBP19.02■□□□□ 0.63
PACS1-201ENST00000320580 CAPZA3Q96KX2 299 aa19.02■□□□□ 0.63
PACS1-201ENST00000320580 AP5Z1O43299 807 aa19.01■□□□□ 0.63
PACS1-201ENST00000320580 JAK2O60674 1132 aa19.01■□□□□ 0.63
PACS1-201ENST00000320580 MYL5Q02045 173 aa19.01■□□□□ 0.63
PACS1-201ENST00000320580 UNC5CLQ8IV45 518 aa19.01■□□□□ 0.63
PACS1-201ENST00000320580 BICC1Q9H694 974 aaKnown RBP19.01■□□□□ 0.63
PACS1-201ENST00000320580 GOLGA6CA6NDK9 693 aa19.01■□□□□ 0.63
PACS1-201ENST00000320580 GOLGA6DP0CG33 693 aa19.01■□□□□ 0.63
PACS1-201ENST00000320580 TAF7Q15545 349 aaPredicted RBP19.01■□□□□ 0.63
PACS1-201ENST00000320580 ANKLE2Q86XL3 938 aa19.01■□□□□ 0.63
PACS1-201ENST00000320580 GOLGA6AQ9NYA3 693 aa19.01■□□□□ 0.63
PACS1-201ENST00000320580 TUBB4BP68371 445 aa19.01■□□□□ 0.63
PACS1-201ENST00000320580 GUCY2CP25092 1073 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms