RNA–Protein interactions for RNA: ENST00000316308.8

CLK4-201, Transcript of CDC like kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK4, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-201ENST00000316308 NEK1Q96PY6 1258 aa17.6■□□□□ 0.41
CLK4-201ENST00000316308 M0R2C6 588 aa17.6■□□□□ 0.41
CLK4-201ENST00000316308 FOSBP53539 338 aa17.6■□□□□ 0.41
CLK4-201ENST00000316308 PLEKHG2Q9H7P9 1386 aa17.59■□□□□ 0.41
CLK4-201ENST00000316308 IFIT1P09914 478 aaKnown RBP17.59■□□□□ 0.41
CLK4-201ENST00000316308 ZBTB1Q9Y2K1 713 aa17.59■□□□□ 0.41
CLK4-201ENST00000316308 TMEM87AQ8NBN3 555 aa17.59■□□□□ 0.41
CLK4-201ENST00000316308 BRF1Q92994 677 aa17.59■□□□□ 0.41
CLK4-201ENST00000316308 TFIP11Q9UBB9 837 aaKnown RBP17.59■□□□□ 0.41
CLK4-201ENST00000316308 TSGA10IPQ3SY00 556 aa17.58■□□□□ 0.41
CLK4-201ENST00000316308 OSBP2Q969R2 916 aa17.58■□□□□ 0.41
CLK4-201ENST00000316308 GPHNQ9NQX3 736 aaPredicted RBP17.58■□□□□ 0.41
CLK4-201ENST00000316308 MAST3O60307 1309 aa17.58■□□□□ 0.41
CLK4-201ENST00000316308 A0A0G2JS52 829 aa17.58■□□□□ 0.4
CLK4-201ENST00000316308 CCDC57Q2TAC2 916 aa17.58■□□□□ 0.4
CLK4-201ENST00000316308 TTC6Q86TZ1 520 aa17.58■□□□□ 0.4
CLK4-201ENST00000316308 TBC1D2BQ9UPU7 963 aa17.58■□□□□ 0.4
CLK4-201ENST00000316308 FOXP2O15409 715 aa17.57■□□□□ 0.4
CLK4-201ENST00000316308 GIMAP6Q6P9H5 292 aa17.57■□□□□ 0.4
CLK4-201ENST00000316308 XAGE2Q96GT9 111 aa17.57■□□□□ 0.4
CLK4-201ENST00000316308 GREM2Q9H772 168 aa17.57■□□□□ 0.4
CLK4-201ENST00000316308 HSPD1P10809 573 aaKnown RBP17.57■□□□□ 0.4
CLK4-201ENST00000316308 PDLIM2Q96JY6 352 aa17.57■□□□□ 0.4
CLK4-201ENST00000316308 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.57■□□□□ 0.4
CLK4-201ENST00000316308 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.56■□□□□ 0.4
CLK4-201ENST00000316308 SNAP23O00161 211 aa17.56■□□□□ 0.4
CLK4-201ENST00000316308 TSPY26PQ9H489 355 aa17.56■□□□□ 0.4
CLK4-201ENST00000316308 HMG20BQ9P0W2 317 aa17.56■□□□□ 0.4
CLK4-201ENST00000316308 HAND2P61296 217 aa17.56■□□□□ 0.4
CLK4-201ENST00000316308 SCRN1Q12765 414 aa17.56■□□□□ 0.4
CLK4-201ENST00000316308 ZMYM1Q5SVZ6 1142 aa17.56■□□□□ 0.4
CLK4-201ENST00000316308 CEP126Q9P2H0 1117 aa17.56■□□□□ 0.4
CLK4-201ENST00000316308 APOBRQ0VD83 1088 aa17.55■□□□□ 0.4
CLK4-201ENST00000316308 NKX2-3Q8TAU0 364 aa17.55■□□□□ 0.4
CLK4-201ENST00000316308 NCOA5Q9HCD5 579 aaKnown RBP17.55■□□□□ 0.4
CLK4-201ENST00000316308 SH3TC1Q8TE82 1336 aa17.55■□□□□ 0.4
CLK4-201ENST00000316308 ITGB4P16144 1822 aa17.55■□□□□ 0.4
CLK4-201ENST00000316308 PALLDQ8WX93 1383 aa17.55■□□□□ 0.4
CLK4-201ENST00000316308 FAM177BA6PVY3 158 aa17.55■□□□□ 0.4
CLK4-201ENST00000316308 HCLS1P14317 486 aaPredicted RBP17.55■□□□□ 0.4
CLK4-201ENST00000316308 HSP90B1P14625 803 aaKnown RBP17.55■□□□□ 0.4
CLK4-201ENST00000316308 ZAP70P43403 619 aa17.55■□□□□ 0.4
CLK4-201ENST00000316308 UBE2HP62256 183 aa17.55■□□□□ 0.4
CLK4-201ENST00000316308 CCT2P78371 535 aaKnown RBP17.55■□□□□ 0.4
CLK4-201ENST00000316308 CYP19A1P11511 503 aaPredicted RBP17.54■□□□□ 0.4
CLK4-201ENST00000316308 NLRP10Q86W26 655 aa17.54■□□□□ 0.4
CLK4-201ENST00000316308 ANP32BQ92688 251 aaKnown RBP17.54■□□□□ 0.4
CLK4-201ENST00000316308 GTF3C6Q969F1 213 aa17.54■□□□□ 0.4
CLK4-201ENST00000316308 DENND2AQ9ULE3 1009 aa17.54■□□□□ 0.4
CLK4-201ENST00000316308 U3KPZ7 1027 aaPredicted RBP17.54■□□□□ 0.4
CLK4-201ENST00000316308 LAMA4Q16363 1823 aa17.54■□□□□ 0.4
CLK4-201ENST00000316308 KIF6Q6ZMV9 814 aa17.54■□□□□ 0.4
CLK4-201ENST00000316308 PUS7LQ9H0K6 701 aaKnown RBP17.54■□□□□ 0.4
CLK4-201ENST00000316308 MAP3K15Q6ZN16 1313 aa17.53■□□□□ 0.4
CLK4-201ENST00000316308 PCCAP05165 728 aaPredicted RBP17.53■□□□□ 0.4
CLK4-201ENST00000316308 GIGYF2Q6Y7W6 1299 aaKnown RBP17.53■□□□□ 0.4
CLK4-201ENST00000316308 ZBTB38Q8NAP3 1195 aaPredicted RBP17.53■□□□□ 0.4
CLK4-201ENST00000316308 TTLL11Q8NHH1 800 aa17.53■□□□□ 0.4
CLK4-201ENST00000316308 GPR108Q9NPR9 543 aa17.53■□□□□ 0.4
CLK4-201ENST00000316308 RNF113AO15541 343 aaKnown RBP17.53■□□□□ 0.4
CLK4-201ENST00000316308 CIAO1O76071 339 aa17.53■□□□□ 0.4
CLK4-201ENST00000316308 CTDNEP1O95476 244 aa17.53■□□□□ 0.4
CLK4-201ENST00000316308 LIG1P18858 919 aa17.53■□□□□ 0.4
CLK4-201ENST00000316308 ITGA6P23229 1130 aa17.53■□□□□ 0.4
CLK4-201ENST00000316308 RAB11FIP4Q86YS3 637 aa17.53■□□□□ 0.4
CLK4-201ENST00000316308 HELBQ8NG08 1087 aaPredicted RBP17.53■□□□□ 0.4
CLK4-201ENST00000316308 FTOQ9C0B1 505 aaKnown RBP eCLIP17.53■□□□□ 0.4
CLK4-201ENST00000316308 E7EWF7 191 aa17.52■□□□□ 0.4
CLK4-201ENST00000316308 CSF1RP07333 972 aa17.52■□□□□ 0.4
CLK4-201ENST00000316308 CAMK4Q16566 473 aa17.52■□□□□ 0.4
CLK4-201ENST00000316308 TAF7LQ5H9L4 462 aa17.52■□□□□ 0.4
CLK4-201ENST00000316308 GORABQ5T7V8 394 aa17.52■□□□□ 0.4
CLK4-201ENST00000316308 ACSBG1Q96GR2 724 aa17.52■□□□□ 0.4
CLK4-201ENST00000316308 NHSL1Q5SYE7 1610 aa17.52■□□□□ 0.4
CLK4-201ENST00000316308 UBN2Q6ZU65 1347 aa17.52■□□□□ 0.4
CLK4-201ENST00000316308 ADAMTS2O95450 1211 aa17.52■□□□□ 0.39
CLK4-201ENST00000316308 STARD3NLO95772 234 aa17.52■□□□□ 0.39
CLK4-201ENST00000316308 IFIT5Q13325 482 aaKnown RBP17.52■□□□□ 0.39
CLK4-201ENST00000316308 TTC39AQ5SRH9 613 aa17.52■□□□□ 0.39
CLK4-201ENST00000316308 CCDC183Q5T5S1 534 aa17.52■□□□□ 0.39
CLK4-201ENST00000316308 ALDH8A1Q9H2A2 487 aaPredicted RBP17.52■□□□□ 0.39
CLK4-201ENST00000316308 NAP1L2Q9ULW6 460 aaPredicted RBP17.52■□□□□ 0.39
CLK4-201ENST00000316308 ANKRD1Q15327 319 aa17.51■□□□□ 0.39
CLK4-201ENST00000316308 HELLSQ9NRZ9 838 aa17.51■□□□□ 0.39
CLK4-201ENST00000316308 BCL9O00512 1426 aa17.51■□□□□ 0.39
CLK4-201ENST00000316308 RIC1Q4ADV7 1423 aa17.51■□□□□ 0.39
CLK4-201ENST00000316308 MCAMP43121 646 aa17.51■□□□□ 0.39
CLK4-201ENST00000316308 FGD1P98174 961 aa17.51■□□□□ 0.39
CLK4-201ENST00000316308 CEBPZQ03701 1054 aaKnown RBP17.51■□□□□ 0.39
CLK4-201ENST00000316308 WASHC4Q2M389 1173 aa17.51■□□□□ 0.39
CLK4-201ENST00000316308 LDHAL6AQ6ZMR3 332 aa17.51■□□□□ 0.39
CLK4-201ENST00000316308 USP25Q9UHP3 1055 aa17.51■□□□□ 0.39
CLK4-201ENST00000316308 RIPOR2Q9Y4F9 1068 aa17.51■□□□□ 0.39
CLK4-201ENST00000316308 TRIM28Q13263 835 aaKnown RBP17.5■□□□□ 0.39
CLK4-201ENST00000316308 SYAP1Q96A49 352 aaPredicted RBP17.5■□□□□ 0.39
CLK4-201ENST00000316308 TRMT112Q9UI30 125 aaKnown RBP17.5■□□□□ 0.39
CLK4-201ENST00000316308 SLIT2O94813 1529 aa17.5■□□□□ 0.39
CLK4-201ENST00000316308 EXOSC10Q01780 885 aaKnown RBP17.5■□□□□ 0.39
CLK4-201ENST00000316308 KRT32Q14532 448 aa17.5■□□□□ 0.39
CLK4-201ENST00000316308 ZSCAN30Q86W11 494 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms