RNA–Protein interactions for RNA: ENST00000315563.10

RRP12-201, Transcript of ribosomal RNA processing 12 homolog, humanhuman

TSL 1 (best) BASIC

Gene RRP12, Length 4,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP12-201ENST00000315563 AOPEPQ8N6M6 819 aa11.65□□□□□ -0.54
RRP12-201ENST00000315563 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.65□□□□□ -0.54
RRP12-201ENST00000315563 CLTCL1P53675 1640 aa11.65□□□□□ -0.54
RRP12-201ENST00000315563 ZCCHC11Q5TAX3 1644 aaKnown RBP11.65□□□□□ -0.54
RRP12-201ENST00000315563 KIAA0232Q92628 1395 aa11.65□□□□□ -0.55
RRP12-201ENST00000315563 RRP9O43818 475 aaKnown RBP11.64□□□□□ -0.55
RRP12-201ENST00000315563 SSRP1Q08945 709 aaKnown RBP11.64□□□□□ -0.55
RRP12-201ENST00000315563 GPT2Q8TD30 523 aa11.64□□□□□ -0.55
RRP12-201ENST00000315563 TSC1Q92574 1164 aa11.64□□□□□ -0.55
RRP12-201ENST00000315563 TRPM1Q7Z4N2 1603 aa11.64□□□□□ -0.55
RRP12-201ENST00000315563 ZBTB43O43298 467 aa11.64□□□□□ -0.55
RRP12-201ENST00000315563 CYP7A1P22680 504 aa11.64□□□□□ -0.55
RRP12-201ENST00000315563 AFMP43652 599 aa11.64□□□□□ -0.55
RRP12-201ENST00000315563 DZIP3Q86Y13 1208 aaKnown RBP11.64□□□□□ -0.55
RRP12-201ENST00000315563 CAGE1Q8TC20 777 aa11.64□□□□□ -0.55
RRP12-201ENST00000315563 MAP7D2Q96T17 732 aa11.64□□□□□ -0.55
RRP12-201ENST00000315563 CHD1O14646 1710 aa11.64□□□□□ -0.55
RRP12-201ENST00000315563 MYOM2P54296 1465 aa11.64□□□□□ -0.55
RRP12-201ENST00000315563 CTCFLQ8NI51 663 aaPredicted RBP11.64□□□□□ -0.55
RRP12-201ENST00000315563 TANGO6Q9C0B7 1094 aa11.64□□□□□ -0.55
RRP12-201ENST00000315563 NOL7Q9UMY1 257 aaKnown RBP11.64□□□□□ -0.55
RRP12-201ENST00000315563 SLC4A4Q9Y6R1 1079 aa11.64□□□□□ -0.55
RRP12-201ENST00000315563 NEURL1BA8MQ27 555 aa11.64□□□□□ -0.55
RRP12-201ENST00000315563 BRD1O95696 1058 aa11.64□□□□□ -0.55
RRP12-201ENST00000315563 RNF113AO15541 343 aaKnown RBP11.63□□□□□ -0.55
RRP12-201ENST00000315563 PRDM1O75626 825 aa11.63□□□□□ -0.55
RRP12-201ENST00000315563 KRT18P05783 430 aaKnown RBP11.63□□□□□ -0.55
RRP12-201ENST00000315563 TOP1P11387 765 aaKnown RBP11.63□□□□□ -0.55
RRP12-201ENST00000315563 PKNOX2Q96KN3 472 aa11.63□□□□□ -0.55
RRP12-201ENST00000315563 TCEAL9Q9UHQ7 104 aa11.63□□□□□ -0.55
RRP12-201ENST00000315563 WWC3Q9ULE0 1092 aa11.63□□□□□ -0.55
RRP12-201ENST00000315563 NSFL1CQ9UNZ2 370 aaKnown RBP11.63□□□□□ -0.55
RRP12-201ENST00000315563 B4E1Z4 1266 aa11.63□□□□□ -0.55
RRP12-201ENST00000315563 EYA2O00167 538 aa11.63□□□□□ -0.55
RRP12-201ENST00000315563 RPS6KB1P23443 525 aa11.63□□□□□ -0.55
RRP12-201ENST00000315563 SYKP43405 635 aa11.63□□□□□ -0.55
RRP12-201ENST00000315563 ENOX2Q16206 610 aaKnown RBP11.63□□□□□ -0.55
RRP12-201ENST00000315563 MAGEB6Q8N7X4 407 aa11.63□□□□□ -0.55
RRP12-201ENST00000315563 TSPY2A6NKD2 308 aa11.63□□□□□ -0.55
RRP12-201ENST00000315563 IGSF3O75054 1194 aa11.63□□□□□ -0.55
RRP12-201ENST00000315563 EPS15P42566 896 aa11.63□□□□□ -0.55
RRP12-201ENST00000315563 STX1AQ16623 288 aa11.63□□□□□ -0.55
RRP12-201ENST00000315563 SLFNL1Q499Z3 407 aa11.63□□□□□ -0.55
RRP12-201ENST00000315563 SPECC1Q5M775 1068 aa11.63□□□□□ -0.55
RRP12-201ENST00000315563 SOGA3Q5TF21 947 aa11.63□□□□□ -0.55
RRP12-201ENST00000315563 ZSCAN16Q9H4T2 348 aaPredicted RBP11.63□□□□□ -0.55
RRP12-201ENST00000315563 MAGEC2Q9UBF1 373 aaPredicted RBP11.63□□□□□ -0.55
RRP12-201ENST00000315563 TPCN1Q9ULQ1 816 aa11.63□□□□□ -0.55
RRP12-201ENST00000315563 SMTNL1A8MU46 457 aa11.62□□□□□ -0.55
RRP12-201ENST00000315563 PDIA4P13667 645 aaKnown RBP11.62□□□□□ -0.55
RRP12-201ENST00000315563 NLRP5P59047 1200 aa11.62□□□□□ -0.55
RRP12-201ENST00000315563 ZNF652Q9Y2D9 606 aa11.62□□□□□ -0.55
RRP12-201ENST00000315563 A0A087WWV3 80 aa11.62□□□□□ -0.55
RRP12-201ENST00000315563 MPHOSPH10O00566 681 aaKnown RBP11.62□□□□□ -0.55
RRP12-201ENST00000315563 SKILP12757 684 aa11.62□□□□□ -0.55
RRP12-201ENST00000315563 LRRC24Q50LG9 513 aa11.62□□□□□ -0.55
RRP12-201ENST00000315563 CEP89Q96ST8 783 aa11.62□□□□□ -0.55
RRP12-201ENST00000315563 IGSF1Q8N6C5 1336 aa11.62□□□□□ -0.55
RRP12-201ENST00000315563 DNA2P51530 1060 aa11.62□□□□□ -0.55
RRP12-201ENST00000315563 GPS2Q13227 327 aa11.62□□□□□ -0.55
RRP12-201ENST00000315563 MLH3Q9UHC1 1453 aa11.62□□□□□ -0.55
RRP12-201ENST00000315563 CCDC196A0A1B0GTZ2 297 aa11.61□□□□□ -0.55
RRP12-201ENST00000315563 hCG_1642624A0A1W2PR95 340 aa11.61□□□□□ -0.55
RRP12-201ENST00000315563 ERICH4A6NGS2 130 aa11.61□□□□□ -0.55
RRP12-201ENST00000315563 C6orf229H3BNL8 230 aa11.61□□□□□ -0.55
RRP12-201ENST00000315563 ITGA6P23229 1130 aa11.61□□□□□ -0.55
RRP12-201ENST00000315563 WTAPQ15007 396 aa11.61□□□□□ -0.55
RRP12-201ENST00000315563 MTERF4Q7Z6M4 381 aaKnown RBP11.61□□□□□ -0.55
RRP12-201ENST00000315563 PLBD2Q8NHP8 589 aa11.61□□□□□ -0.55
RRP12-201ENST00000315563 MRPS27Q92552 414 aaKnown RBP11.61□□□□□ -0.55
RRP12-201ENST00000315563 WASF1Q92558 559 aa11.61□□□□□ -0.55
RRP12-201ENST00000315563 UBXN4Q92575 508 aa11.61□□□□□ -0.55
RRP12-201ENST00000315563 XAGE2Q96GT9 111 aa11.61□□□□□ -0.55
RRP12-201ENST00000315563 CCDC43Q96MW1 224 aaKnown RBP11.61□□□□□ -0.55
RRP12-201ENST00000315563 IBTKQ9P2D0 1353 aaPredicted RBP11.61□□□□□ -0.55
RRP12-201ENST00000315563 NEO1Q92859 1461 aa11.61□□□□□ -0.55
RRP12-201ENST00000315563 PHKBQ93100 1093 aa11.61□□□□□ -0.55
RRP12-201ENST00000315563 SPTLC2O15270 562 aa11.61□□□□□ -0.55
RRP12-201ENST00000315563 ZAP70P43403 619 aa11.61□□□□□ -0.55
RRP12-201ENST00000315563 TEX13AQ9BXU3 409 aaPredicted RBP11.61□□□□□ -0.55
RRP12-201ENST00000315563 CTDP1Q9Y5B0 961 aaPredicted RBP11.61□□□□□ -0.55
RRP12-201ENST00000315563 F8W031 263 aaPredicted RBP11.6□□□□□ -0.55
RRP12-201ENST00000315563 ARHGAP29Q52LW3 1261 aa11.6□□□□□ -0.55
RRP12-201ENST00000315563 KIF18AQ8NI77 898 aa11.6□□□□□ -0.55
RRP12-201ENST00000315563 PUS3Q9BZE2 481 aaKnown RBP11.6□□□□□ -0.55
RRP12-201ENST00000315563 PLXNC1O60486 1568 aa11.6□□□□□ -0.55
RRP12-201ENST00000315563 LIG1P18858 919 aa11.6□□□□□ -0.55
RRP12-201ENST00000315563 STX17P56962 302 aa11.6□□□□□ -0.55
RRP12-201ENST00000315563 TTF1Q15361 905 aaPredicted RBP11.6□□□□□ -0.55
RRP12-201ENST00000315563 DDB1Q16531 1140 aa11.6□□□□□ -0.55
RRP12-201ENST00000315563 CCDC102BQ68D86 513 aa11.6□□□□□ -0.55
RRP12-201ENST00000315563 CATIPQ7Z7H3 387 aa11.6□□□□□ -0.55
RRP12-201ENST00000315563 ZNF589Q86UQ0 364 aaPredicted RBP11.6□□□□□ -0.55
RRP12-201ENST00000315563 SMARCE1Q969G3 411 aa11.6□□□□□ -0.55
RRP12-201ENST00000315563 ARHGEF10O15013 1369 aa11.6□□□□□ -0.55
RRP12-201ENST00000315563 CTAGE5O15320 804 aa11.6□□□□□ -0.55
RRP12-201ENST00000315563 HOXB7P09629 217 aa11.6□□□□□ -0.55
RRP12-201ENST00000315563 EIF5P55010 431 aaKnown RBP11.6□□□□□ -0.55
RRP12-201ENST00000315563 HSP90B2PQ58FF3 399 aa11.6□□□□□ -0.55
RRP12-201ENST00000315563 KBTBD3Q8NAB2 608 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms