RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 DNAI1Q9UI46 699 aa17.14■□□□□ 0.33
COL6A2-202ENST00000310645 BTBD11A6QL63 1104 aa17.14■□□□□ 0.33
COL6A2-202ENST00000310645 HDGFP51858 240 aaKnown RBP17.14■□□□□ 0.33
COL6A2-202ENST00000310645 GSDMDP57764 484 aa17.14■□□□□ 0.33
COL6A2-202ENST00000310645 APOBRQ0VD83 1088 aa17.14■□□□□ 0.33
COL6A2-202ENST00000310645 NBPF11Q86T75 865 aa17.14■□□□□ 0.33
COL6A2-202ENST00000310645 HMG20BQ9P0W2 317 aa17.14■□□□□ 0.33
COL6A2-202ENST00000310645 PRAMEF22A3QJZ6 481 aa17.13■□□□□ 0.33
COL6A2-202ENST00000310645 FAM160A1Q05DH4 1040 aa17.13■□□□□ 0.33
COL6A2-202ENST00000310645 SF3A1Q15459 793 aaKnown RBP17.13■□□□□ 0.33
COL6A2-202ENST00000310645 ZBTB9Q96C00 473 aa17.13■□□□□ 0.33
COL6A2-202ENST00000310645 RCOR1Q9UKL0 485 aa17.13■□□□□ 0.33
COL6A2-202ENST00000310645 AKAP12Q02952 1782 aa17.13■□□□□ 0.33
COL6A2-202ENST00000310645 KIF2AO00139 706 aaPredicted RBP17.13■□□□□ 0.33
COL6A2-202ENST00000310645 ADD1P35611 737 aaKnown RBP17.13■□□□□ 0.33
COL6A2-202ENST00000310645 PTPN21Q16825 1174 aa17.13■□□□□ 0.33
COL6A2-202ENST00000310645 CYB5RLQ6IPT4 315 aa17.13■□□□□ 0.33
COL6A2-202ENST00000310645 UBXN4Q92575 508 aa17.13■□□□□ 0.33
COL6A2-202ENST00000310645 PTPDC1A2A3K4 754 aa17.12■□□□□ 0.33
COL6A2-202ENST00000310645 GIGYF1O75420 1035 aaPredicted RBP17.12■□□□□ 0.33
COL6A2-202ENST00000310645 HNRNPH2P55795 449 aaKnown RBP17.12■□□□□ 0.33
COL6A2-202ENST00000310645 MTX1Q13505 466 aa17.12■□□□□ 0.33
COL6A2-202ENST00000310645 DPCR1Q3MIW9 517 aa17.12■□□□□ 0.33
COL6A2-202ENST00000310645 ARMCX5Q6P1M9 558 aa17.12■□□□□ 0.33
COL6A2-202ENST00000310645 PLPPR3Q6T4P5 718 aa17.12■□□□□ 0.33
COL6A2-202ENST00000310645 CHST3Q7LGC8 479 aa17.12■□□□□ 0.33
COL6A2-202ENST00000310645 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.12■□□□□ 0.33
COL6A2-202ENST00000310645 PNMA6AP0CW24 399 aaPredicted RBP17.12■□□□□ 0.33
COL6A2-202ENST00000310645 KRT32Q14532 448 aa17.12■□□□□ 0.33
COL6A2-202ENST00000310645 OTUD7BQ6GQQ9 843 aa17.12■□□□□ 0.33
COL6A2-202ENST00000310645 MNS1Q8NEH6 495 aa17.12■□□□□ 0.33
COL6A2-202ENST00000310645 TMX1Q9H3N1 280 aa17.12■□□□□ 0.33
COL6A2-202ENST00000310645 FHOD1Q9Y613 1164 aa17.12■□□□□ 0.33
COL6A2-202ENST00000310645 RGPD1P0DJD0 1748 aa17.12■□□□□ 0.33
COL6A2-202ENST00000310645 URI1O94763 535 aaPredicted RBP17.12■□□□□ 0.33
COL6A2-202ENST00000310645 CYP21A2P08686 494 aa17.12■□□□□ 0.33
COL6A2-202ENST00000310645 SLFNL1Q499Z3 407 aa17.12■□□□□ 0.33
COL6A2-202ENST00000310645 OSCARQ8IYS5 282 aa17.12■□□□□ 0.33
COL6A2-202ENST00000310645 PLCD3Q8N3E9 789 aa17.12■□□□□ 0.33
COL6A2-202ENST00000310645 SIRT1Q96EB6 747 aa17.12■□□□□ 0.33
COL6A2-202ENST00000310645 EPC1Q9H2F5 836 aa17.12■□□□□ 0.33
COL6A2-202ENST00000310645 DBF4Q9UBU7 674 aaPredicted RBP17.12■□□□□ 0.33
COL6A2-202ENST00000310645 SEC31AO94979 1220 aaKnown RBP17.11■□□□□ 0.33
COL6A2-202ENST00000310645 LMOD1P29536 600 aaPredicted RBP17.11■□□□□ 0.33
COL6A2-202ENST00000310645 NEK11Q8NG66 645 aa17.11■□□□□ 0.33
COL6A2-202ENST00000310645 NRDCO43847 1150 aa17.11■□□□□ 0.33
COL6A2-202ENST00000310645 TMCO3Q6UWJ1 677 aa17.11■□□□□ 0.33
COL6A2-202ENST00000310645 ZNF396Q96N95 335 aaPredicted RBP17.11■□□□□ 0.33
COL6A2-202ENST00000310645 FAM53CQ9NYF3 392 aa17.11■□□□□ 0.33
COL6A2-202ENST00000310645 GRM8O00222 908 aa17.11■□□□□ 0.33
COL6A2-202ENST00000310645 H2AFXP16104 143 aaPredicted RBP17.11■□□□□ 0.33
COL6A2-202ENST00000310645 ABTB2Q8N961 1025 aa17.11■□□□□ 0.33
COL6A2-202ENST00000310645 SPATA31D1Q6ZQQ2 1576 aa17.1■□□□□ 0.33
COL6A2-202ENST00000310645 POLR3DP05423 398 aaPredicted RBP17.1■□□□□ 0.33
COL6A2-202ENST00000310645 KSR2Q6VAB6 950 aa17.1■□□□□ 0.33
COL6A2-202ENST00000310645 NSUN7Q8NE18 718 aaKnown RBP17.1■□□□□ 0.33
COL6A2-202ENST00000310645 GOLGA8FQ08AF8 430 aa17.1■□□□□ 0.33
COL6A2-202ENST00000310645 GOLGA8DPQ0D2H9 430 aa17.1■□□□□ 0.33
COL6A2-202ENST00000310645 DDX46Q7L014 1031 aaKnown RBP17.1■□□□□ 0.33
COL6A2-202ENST00000310645 ENGASEQ8NFI3 743 aa17.1■□□□□ 0.33
COL6A2-202ENST00000310645 KAZALD1Q96I82 304 aa17.1■□□□□ 0.33
COL6A2-202ENST00000310645 BABAM1Q9NWV8 329 aa17.1■□□□□ 0.33
COL6A2-202ENST00000310645 PCDHA7Q9UN72 937 aa17.1■□□□□ 0.33
COL6A2-202ENST00000310645 PLA2G4AP47712 749 aa17.09■□□□□ 0.33
COL6A2-202ENST00000310645 ZCCHC17Q9NP64 241 aaKnown RBP17.09■□□□□ 0.33
COL6A2-202ENST00000310645 NDUFA8P51970 172 aa17.09■□□□□ 0.33
COL6A2-202ENST00000310645 MRPS27Q92552 414 aaKnown RBP17.09■□□□□ 0.33
COL6A2-202ENST00000310645 MED23Q9ULK4 1368 aa17.09■□□□□ 0.33
COL6A2-202ENST00000310645 ALDH1L1O75891 902 aa17.09■□□□□ 0.33
COL6A2-202ENST00000310645 CYP2C19P33261 490 aa17.09■□□□□ 0.33
COL6A2-202ENST00000310645 GNL2Q13823 731 aaKnown RBP17.09■□□□□ 0.33
COL6A2-202ENST00000310645 ALDH8A1Q9H2A2 487 aaPredicted RBP17.09■□□□□ 0.33
COL6A2-202ENST00000310645 L2HGDHQ9H9P8 463 aa17.09■□□□□ 0.33
COL6A2-202ENST00000310645 ADGRL3Q9HAR2 1447 aa17.09■□□□□ 0.33
COL6A2-202ENST00000310645 CACNA1FO60840 1977 aa17.08■□□□□ 0.33
COL6A2-202ENST00000310645 SETD1AO15047 1707 aaKnown RBP17.08■□□□□ 0.33
COL6A2-202ENST00000310645 STK38Q15208 465 aa17.08■□□□□ 0.33
COL6A2-202ENST00000310645 ZNF530Q6P9A1 599 aaPredicted RBP17.08■□□□□ 0.33
COL6A2-202ENST00000310645 CARD6Q9BX69 1037 aa17.08■□□□□ 0.33
COL6A2-202ENST00000310645 OSBPL5Q9H0X9 879 aaPredicted RBP17.08■□□□□ 0.33
COL6A2-202ENST00000310645 ARGLU1Q9NWB6 273 aaPredicted RBP17.08■□□□□ 0.33
COL6A2-202ENST00000310645 SETD1BQ9UPS6 1966 aaKnown RBP17.08■□□□□ 0.33
COL6A2-202ENST00000310645 CTDNEP1O95476 244 aa17.08■□□□□ 0.32
COL6A2-202ENST00000310645 CAPN2P17655 700 aa17.08■□□□□ 0.32
COL6A2-202ENST00000310645 COL15A1P39059 1388 aa17.08■□□□□ 0.32
COL6A2-202ENST00000310645 STOX1Q6ZVD7 989 aa17.08■□□□□ 0.32
COL6A2-202ENST00000310645 CCDC150Q8NCX0 1101 aa17.08■□□□□ 0.32
COL6A2-202ENST00000310645 HDAC5Q9UQL6 1122 aa17.08■□□□□ 0.32
COL6A2-202ENST00000310645 TEX35Q5T0J7 233 aa17.07■□□□□ 0.32
COL6A2-202ENST00000310645 RAB11FIP4Q86YS3 637 aa17.07■□□□□ 0.32
COL6A2-202ENST00000310645 CCDC34Q96HJ3 373 aa17.07■□□□□ 0.32
COL6A2-202ENST00000310645 ATP1A3P13637 1013 aa17.06■□□□□ 0.32
COL6A2-202ENST00000310645 ETF1P62495 437 aaKnown RBP17.06■□□□□ 0.32
COL6A2-202ENST00000310645 TSGA10IPQ3SY00 556 aa17.06■□□□□ 0.32
COL6A2-202ENST00000310645 NAA16Q6N069 864 aaPredicted RBP17.06■□□□□ 0.32
COL6A2-202ENST00000310645 RIC3Q7Z5B4 369 aa17.06■□□□□ 0.32
COL6A2-202ENST00000310645 KIAA1468Q9P260 1216 aa17.06■□□□□ 0.32
COL6A2-202ENST00000310645 IMPACTQ9P2X3 320 aa17.06■□□□□ 0.32
COL6A2-202ENST00000310645 U3KPZ7 1027 aaPredicted RBP17.06■□□□□ 0.32
COL6A2-202ENST00000310645 A0A0G2JLW4 131 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms