RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 LRRC37AA6NMS7 1700 aa24.84■■□□□ 1.57
VEGFB-201ENST00000309422 INTS3Q68E01 1043 aaKnown RBP24.83■■□□□ 1.57
VEGFB-201ENST00000309422 ZC3H12CQ9C0D7 883 aaKnown RBP24.83■■□□□ 1.57
VEGFB-201ENST00000309422 USP44Q9H0E7 712 aa24.83■■□□□ 1.57
VEGFB-201ENST00000309422 CNNM1Q9NRU3 951 aa24.83■■□□□ 1.57
VEGFB-201ENST00000309422 PODXL2Q9NZ53 605 aa24.83■■□□□ 1.57
VEGFB-201ENST00000309422 ATP2B4P23634 1241 aa24.82■■□□□ 1.56
VEGFB-201ENST00000309422 KIAA2012Q0VF49 1180 aa24.82■■□□□ 1.56
VEGFB-201ENST00000309422 DZIP1LQ8IYY4 767 aaKnown RBP24.81■■□□□ 1.56
VEGFB-201ENST00000309422 SBF1O95248 1867 aa24.81■■□□□ 1.56
VEGFB-201ENST00000309422 LDHAL6AQ6ZMR3 332 aa24.8■■□□□ 1.56
VEGFB-201ENST00000309422 TBC1D16Q8TBP0 767 aa24.8■■□□□ 1.56
VEGFB-201ENST00000309422 RABL6Q3YEC7 729 aaPredicted RBP24.8■■□□□ 1.56
VEGFB-201ENST00000309422 EPHA10Q5JZY3 1008 aa24.8■■□□□ 1.56
VEGFB-201ENST00000309422 ITPRIPQ8IWB1 547 aa24.8■■□□□ 1.56
VEGFB-201ENST00000309422 MINPP1Q9UNW1 487 aa24.8■■□□□ 1.56
VEGFB-201ENST00000309422 IQCA1LA6NCM1 817 aa24.79■■□□□ 1.56
VEGFB-201ENST00000309422 SLC51AQ86UW1 340 aa24.79■■□□□ 1.56
VEGFB-201ENST00000309422 ZNRF3Q9ULT6 936 aa24.79■■□□□ 1.56
VEGFB-201ENST00000309422 FZD9O00144 591 aa24.78■■□□□ 1.56
VEGFB-201ENST00000309422 RIMBP2O15034 1052 aa24.78■■□□□ 1.56
VEGFB-201ENST00000309422 LEMD3Q9Y2U8 911 aa24.78■■□□□ 1.56
VEGFB-201ENST00000309422 GJA3Q9Y6H8 435 aa24.78■■□□□ 1.56
VEGFB-201ENST00000309422 LMOD1P29536 600 aaPredicted RBP24.77■■□□□ 1.56
VEGFB-201ENST00000309422 GPC2Q8N158 579 aa24.77■■□□□ 1.56
VEGFB-201ENST00000309422 TMEM57Q8N5G2 664 aa24.77■■□□□ 1.56
VEGFB-201ENST00000309422 MEIS3Q99687 375 aa24.77■■□□□ 1.56
VEGFB-201ENST00000309422 POLLQ9UGP5 575 aa24.77■■□□□ 1.56
VEGFB-201ENST00000309422 DICER1Q9UPY3 1922 aaKnown RBP24.76■■□□□ 1.55
VEGFB-201ENST00000309422 VEGFAP15692 232 aaPredicted RBP24.76■■□□□ 1.55
VEGFB-201ENST00000309422 CHRNDQ07001 517 aa24.76■■□□□ 1.55
VEGFB-201ENST00000309422 NMRK2Q9NPI5 230 aa24.76■■□□□ 1.55
VEGFB-201ENST00000309422 LRRFIP2Q9Y608 721 aaKnown RBP24.76■■□□□ 1.55
VEGFB-201ENST00000309422 TAF1P21675 1872 aa24.76■■□□□ 1.55
VEGFB-201ENST00000309422 ZNF541Q9H0D2 1346 aa24.75■■□□□ 1.55
VEGFB-201ENST00000309422 GNAI2P04899 355 aa24.75■■□□□ 1.55
VEGFB-201ENST00000309422 TNIP1Q15025 636 aa24.75■■□□□ 1.55
VEGFB-201ENST00000309422 RRAGCQ9HB90 399 aa24.75■■□□□ 1.55
VEGFB-201ENST00000309422 DUOX1Q9NRD9 1551 aa24.75■■□□□ 1.55
VEGFB-201ENST00000309422 DDNO94850 711 aaPredicted RBP24.74■■□□□ 1.55
VEGFB-201ENST00000309422 ANKRD44Q8N8A2 993 aa24.74■■□□□ 1.55
VEGFB-201ENST00000309422 KAZALD1Q96I82 304 aa24.74■■□□□ 1.55
VEGFB-201ENST00000309422 CHMP4BQ9H444 224 aaKnown RBP24.74■■□□□ 1.55
VEGFB-201ENST00000309422 COL4A1P02462 1669 aa24.74■■□□□ 1.55
VEGFB-201ENST00000309422 MED23Q9ULK4 1368 aa24.74■■□□□ 1.55
VEGFB-201ENST00000309422 CCDC88AQ3V6T2 1871 aa24.74■■□□□ 1.55
VEGFB-201ENST00000309422 ZNF804BA4D1E1 1349 aa24.73■■□□□ 1.55
VEGFB-201ENST00000309422 CIAPIN1Q6FI81 312 aa24.73■■□□□ 1.55
VEGFB-201ENST00000309422 ZNF594Q96JF6 807 aaPredicted RBP24.73■■□□□ 1.55
VEGFB-201ENST00000309422 DBNDD1Q9H9R9 158 aa24.73■■□□□ 1.55
VEGFB-201ENST00000309422 MROH5Q6ZUA9 1318 aa24.73■■□□□ 1.55
VEGFB-201ENST00000309422 ECE2O60344 883 aa24.72■■□□□ 1.55
VEGFB-201ENST00000309422 SPEF2Q9C093 1822 aa24.71■■□□□ 1.55
VEGFB-201ENST00000309422 METTL24Q5JXM2 366 aa24.71■■□□□ 1.55
VEGFB-201ENST00000309422 GPR101Q96P66 508 aaPredicted RBP24.71■■□□□ 1.55
VEGFB-201ENST00000309422 TNNQ9UQP3 1299 aa24.71■■□□□ 1.55
VEGFB-201ENST00000309422 PLIN1O60240 522 aa24.7■■□□□ 1.55
VEGFB-201ENST00000309422 DOK7Q18PE1 504 aa24.7■■□□□ 1.55
VEGFB-201ENST00000309422 L3MBTL3Q96JM7 780 aaPredicted RBP24.7■■□□□ 1.55
VEGFB-201ENST00000309422 HACL1Q9UJ83 578 aa24.7■■□□□ 1.55
VEGFB-201ENST00000309422 LTBP1Q14766 1721 aa24.69■■□□□ 1.54
VEGFB-201ENST00000309422 KIF3CO14782 793 aa24.68■■□□□ 1.54
VEGFB-201ENST00000309422 RAD17O75943 681 aa24.68■■□□□ 1.54
VEGFB-201ENST00000309422 TOMM70O94826 608 aa24.68■■□□□ 1.54
VEGFB-201ENST00000309422 SRGAP3O43295 1099 aa24.67■■□□□ 1.54
VEGFB-201ENST00000309422 CXCL9Q07325 125 aa24.67■■□□□ 1.54
VEGFB-201ENST00000309422 ZNF804AQ7Z570 1209 aa24.67■■□□□ 1.54
VEGFB-201ENST00000309422 PODNQ7Z5L7 613 aa24.67■■□□□ 1.54
VEGFB-201ENST00000309422 FBXO3Q9UK99 471 aa24.67■■□□□ 1.54
VEGFB-201ENST00000309422 WDR90Q96KV7 1748 aa24.67■■□□□ 1.54
VEGFB-201ENST00000309422 TAF5LO75529 589 aa24.67■■□□□ 1.54
VEGFB-201ENST00000309422 HELBQ8NG08 1087 aaPredicted RBP24.67■■□□□ 1.54
VEGFB-201ENST00000309422 PANK1Q8TE04 598 aa24.67■■□□□ 1.54
VEGFB-201ENST00000309422 COA1Q9GZY4 146 aa24.67■■□□□ 1.54
VEGFB-201ENST00000309422 DDX19BQ9UMR2 479 aa24.67■■□□□ 1.54
VEGFB-201ENST00000309422 COL4A5P29400 1685 aa24.66■■□□□ 1.54
VEGFB-201ENST00000309422 PNMA8AQ86V59 439 aaPredicted RBP24.66■■□□□ 1.54
VEGFB-201ENST00000309422 FBXW7Q969H0 707 aa24.66■■□□□ 1.54
VEGFB-201ENST00000309422 EYA2O00167 538 aa24.65■■□□□ 1.54
VEGFB-201ENST00000309422 VPS37DQ86XT2 251 aa24.65■■□□□ 1.54
VEGFB-201ENST00000309422 RBM46Q8TBY0 533 aaKnown RBP24.65■■□□□ 1.54
VEGFB-201ENST00000309422 RLBP1P12271 317 aa24.64■■□□□ 1.53
VEGFB-201ENST00000309422 RPS12P25398 132 aaKnown RBP24.64■■□□□ 1.53
VEGFB-201ENST00000309422 EPHX2P34913 555 aa24.64■■□□□ 1.53
VEGFB-201ENST00000309422 UBE4AQ14139 1066 aa24.64■■□□□ 1.53
VEGFB-201ENST00000309422 EAPPQ56P03 285 aaPredicted RBP24.64■■□□□ 1.53
VEGFB-201ENST00000309422 SMC1BQ8NDV3 1235 aa24.64■■□□□ 1.53
VEGFB-201ENST00000309422 KLHDC4Q8TBB5 520 aa24.64■■□□□ 1.53
VEGFB-201ENST00000309422 SIL1Q9H173 461 aa24.64■■□□□ 1.53
VEGFB-201ENST00000309422 CIAO1O76071 339 aa24.63■■□□□ 1.53
VEGFB-201ENST00000309422 C1QTNF8P60827 252 aa24.63■■□□□ 1.53
VEGFB-201ENST00000309422 MVPQ14764 893 aaKnown RBP24.63■■□□□ 1.53
VEGFB-201ENST00000309422 PUS3Q9BZE2 481 aaKnown RBP24.63■■□□□ 1.53
VEGFB-201ENST00000309422 YDJCA8MPS7 323 aa24.62■■□□□ 1.53
VEGFB-201ENST00000309422 IL15P40933 162 aaPredicted RBP24.62■■□□□ 1.53
VEGFB-201ENST00000309422 GMPSP49915 693 aaPredicted RBP24.62■■□□□ 1.53
VEGFB-201ENST00000309422 MTX1Q13505 466 aa24.62■■□□□ 1.53
VEGFB-201ENST00000309422 PDE3AQ14432 1141 aa24.62■■□□□ 1.53
VEGFB-201ENST00000309422 PUM3Q15397 648 aaKnown RBP24.62■■□□□ 1.53
VEGFB-201ENST00000309422 RIPOR2Q9Y4F9 1068 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms