RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 RFX5P48382 616 aaPredicted RBP22.25■■□□□ 1.15
SSSCA1-201ENST00000309328 PTPN12Q05209 780 aaKnown RBP22.25■■□□□ 1.15
SSSCA1-201ENST00000309328 POLA2Q14181 598 aa22.25■■□□□ 1.15
SSSCA1-201ENST00000309328 CRBNQ96SW2 442 aa22.25■■□□□ 1.15
SSSCA1-201ENST00000309328 C1orf115Q9H7X2 142 aa22.25■■□□□ 1.15
SSSCA1-201ENST00000309328 ANKIB1Q9P2G1 1089 aa22.25■■□□□ 1.15
SSSCA1-201ENST00000309328 ZNF219Q9P2Y4 722 aaPredicted RBP22.25■■□□□ 1.15
SSSCA1-201ENST00000309328 MINPP1Q9UNW1 487 aa22.25■■□□□ 1.15
SSSCA1-201ENST00000309328 NSFL1CQ9UNZ2 370 aaKnown RBP22.24■■□□□ 1.15
SSSCA1-201ENST00000309328 SNED1Q8TER0 1413 aa22.23■■□□□ 1.15
SSSCA1-201ENST00000309328 EYA2O00167 538 aa22.23■■□□□ 1.15
SSSCA1-201ENST00000309328 ATP2B4P23634 1241 aa22.23■■□□□ 1.15
SSSCA1-201ENST00000309328 IL15P40933 162 aaPredicted RBP22.23■■□□□ 1.15
SSSCA1-201ENST00000309328 EYA3Q99504 573 aa22.23■■□□□ 1.15
SSSCA1-201ENST00000309328 GGA1Q9UJY5 639 aa22.23■■□□□ 1.15
SSSCA1-201ENST00000309328 LEMD3Q9Y2U8 911 aa22.23■■□□□ 1.15
SSSCA1-201ENST00000309328 LRRC37AA6NMS7 1700 aa22.23■■□□□ 1.15
SSSCA1-201ENST00000309328 LMNB1P20700 586 aa22.22■■□□□ 1.15
SSSCA1-201ENST00000309328 HSP90AB4PQ58FF6 505 aa22.22■■□□□ 1.15
SSSCA1-201ENST00000309328 ZNF594Q96JF6 807 aaPredicted RBP22.22■■□□□ 1.15
SSSCA1-201ENST00000309328 RIPOR2Q9Y4F9 1068 aa22.22■■□□□ 1.15
SSSCA1-201ENST00000309328 PNMA6EA0A0J9YXQ4 647 aa22.21■■□□□ 1.15
SSSCA1-201ENST00000309328 NFKBIEO00221 500 aa22.21■■□□□ 1.15
SSSCA1-201ENST00000309328 CHRNDQ07001 517 aa22.21■■□□□ 1.15
SSSCA1-201ENST00000309328 UTRNP46939 3433 aa22.21■■□□□ 1.15
SSSCA1-201ENST00000309328 GPSM2P81274 684 aa22.2■■□□□ 1.14
SSSCA1-201ENST00000309328 G3BP1Q13283 466 aaKnown RBP eCLIP22.2■■□□□ 1.14
SSSCA1-201ENST00000309328 ZC3H4Q9UPT8 1303 aaKnown RBP22.2■■□□□ 1.14
SSSCA1-201ENST00000309328 UFL1O94874 794 aa22.19■■□□□ 1.14
SSSCA1-201ENST00000309328 KCNJ4P48050 445 aa22.19■■□□□ 1.14
SSSCA1-201ENST00000309328 METTL24Q5JXM2 366 aa22.19■■□□□ 1.14
SSSCA1-201ENST00000309328 OLFM4Q6UX06 510 aa22.19■■□□□ 1.14
SSSCA1-201ENST00000309328 NOP58Q9Y2X3 529 aaKnown RBP22.19■■□□□ 1.14
SSSCA1-201ENST00000309328 C6orf229H3BNL8 230 aa22.18■■□□□ 1.14
SSSCA1-201ENST00000309328 UBE4AQ14139 1066 aa22.18■■□□□ 1.14
SSSCA1-201ENST00000309328 ERC1Q8IUD2 1116 aa22.18■■□□□ 1.14
SSSCA1-201ENST00000309328 TBC1D16Q8TBP0 767 aa22.18■■□□□ 1.14
SSSCA1-201ENST00000309328 CEP126Q9P2H0 1117 aa22.18■■□□□ 1.14
SSSCA1-201ENST00000309328 PDE8BO95263 885 aa22.17■■□□□ 1.14
SSSCA1-201ENST00000309328 NEFLP07196 543 aa22.17■■□□□ 1.14
SSSCA1-201ENST00000309328 IARSP41252 1262 aaKnown RBP22.17■■□□□ 1.14
SSSCA1-201ENST00000309328 KLHDC4Q8TBB5 520 aa22.17■■□□□ 1.14
SSSCA1-201ENST00000309328 CACNA1SQ13698 1873 aa22.16■■□□□ 1.14
SSSCA1-201ENST00000309328 ZNF804BA4D1E1 1349 aa22.16■■□□□ 1.14
SSSCA1-201ENST00000309328 SURF6O75683 361 aaKnown RBP22.16■■□□□ 1.14
SSSCA1-201ENST00000309328 KIAA2012Q0VF49 1180 aa22.16■■□□□ 1.14
SSSCA1-201ENST00000309328 WASHC4Q2M389 1173 aa22.16■■□□□ 1.14
SSSCA1-201ENST00000309328 LRRC24Q50LG9 513 aa22.16■■□□□ 1.14
SSSCA1-201ENST00000309328 ATG9AQ7Z3C6 839 aa22.16■■□□□ 1.14
SSSCA1-201ENST00000309328 PUS3Q9BZE2 481 aaKnown RBP22.16■■□□□ 1.14
SSSCA1-201ENST00000309328 ZC3H12CQ9C0D7 883 aaKnown RBP22.16■■□□□ 1.14
SSSCA1-201ENST00000309328 SIL1Q9H173 461 aa22.16■■□□□ 1.14
SSSCA1-201ENST00000309328 PA2G4Q9UQ80 394 aaKnown RBP22.16■■□□□ 1.14
SSSCA1-201ENST00000309328 COL4A1P02462 1669 aa22.16■■□□□ 1.14
SSSCA1-201ENST00000309328 MED23Q9ULK4 1368 aa22.15■■□□□ 1.14
SSSCA1-201ENST00000309328 OS9Q13438 667 aaPredicted RBP22.15■■□□□ 1.14
SSSCA1-201ENST00000309328 PUM3Q15397 648 aaKnown RBP22.15■■□□□ 1.14
SSSCA1-201ENST00000309328 C15orf52Q6ZUT6 534 aaKnown RBP22.15■■□□□ 1.14
SSSCA1-201ENST00000309328 JDP2Q8WYK2 163 aa22.15■■□□□ 1.14
SSSCA1-201ENST00000309328 POLLQ9UGP5 575 aa22.15■■□□□ 1.14
SSSCA1-201ENST00000309328 AKAP2Q9Y2D5 859 aa22.15■■□□□ 1.14
SSSCA1-201ENST00000309328 FER1L6Q2WGJ9 1857 aa22.15■■□□□ 1.14
SSSCA1-201ENST00000309328 PPIP5K2O43314 1243 aa22.14■■□□□ 1.13
SSSCA1-201ENST00000309328 RASSF7Q02833 373 aa22.14■■□□□ 1.13
SSSCA1-201ENST00000309328 LARGE2Q8N3Y3 721 aa22.14■■□□□ 1.13
SSSCA1-201ENST00000309328 VGLL2Q8N8G2 317 aa22.14■■□□□ 1.13
SSSCA1-201ENST00000309328 EXOC6Q8TAG9 804 aa22.14■■□□□ 1.13
SSSCA1-201ENST00000309328 ZNF277Q9NRM2 450 aaPredicted RBP22.14■■□□□ 1.13
SSSCA1-201ENST00000309328 RAB11FIP3O75154 756 aa22.13■■□□□ 1.13
SSSCA1-201ENST00000309328 SIRT2Q8IXJ6 389 aa22.13■■□□□ 1.13
SSSCA1-201ENST00000309328 TAF1P21675 1872 aa22.13■■□□□ 1.13
SSSCA1-201ENST00000309328 LTBP1Q14766 1721 aa22.12■■□□□ 1.13
SSSCA1-201ENST00000309328 IFIT1P09914 478 aaKnown RBP22.12■■□□□ 1.13
SSSCA1-201ENST00000309328 C9orf131Q5VYM1 1079 aa22.12■■□□□ 1.13
SSSCA1-201ENST00000309328 NIM1KQ8IY84 436 aa22.12■■□□□ 1.13
SSSCA1-201ENST00000309328 LPIN2Q92539 896 aa22.12■■□□□ 1.13
SSSCA1-201ENST00000309328 GPR108Q9NPR9 543 aa22.12■■□□□ 1.13
SSSCA1-201ENST00000309328 RNF181Q9P0P0 153 aa22.12■■□□□ 1.13
SSSCA1-201ENST00000309328 DUOX1Q9NRD9 1551 aa22.12■■□□□ 1.13
SSSCA1-201ENST00000309328 TAF5LO75529 589 aa22.11■■□□□ 1.13
SSSCA1-201ENST00000309328 HDAC1Q13547 482 aaPredicted RBP22.11■■□□□ 1.13
SSSCA1-201ENST00000309328 HELBQ8NG08 1087 aaPredicted RBP22.11■■□□□ 1.13
SSSCA1-201ENST00000309328 PCDHB15Q9Y5E8 787 aa22.11■■□□□ 1.13
SSSCA1-201ENST00000309328 G3V3G9 751 aa22.1■■□□□ 1.13
SSSCA1-201ENST00000309328 SLC5A1P13866 664 aa22.1■■□□□ 1.13
SSSCA1-201ENST00000309328 DCAF8Q5TAQ9 597 aa22.1■■□□□ 1.13
SSSCA1-201ENST00000309328 KIF1BPQ96EK5 621 aa22.1■■□□□ 1.13
SSSCA1-201ENST00000309328 RWDD1Q9H446 243 aaPredicted RBP22.1■■□□□ 1.13
SSSCA1-201ENST00000309328 ATP2B3Q16720 1220 aa22.09■■□□□ 1.13
SSSCA1-201ENST00000309328 AOC3Q16853 763 aa22.09■■□□□ 1.13
SSSCA1-201ENST00000309328 CAVIN4Q5BKX8 364 aa22.09■■□□□ 1.13
SSSCA1-201ENST00000309328 ZNF804AQ7Z570 1209 aa22.09■■□□□ 1.13
SSSCA1-201ENST00000309328 PODNQ7Z5L7 613 aa22.09■■□□□ 1.13
SSSCA1-201ENST00000309328 COA1Q9GZY4 146 aa22.09■■□□□ 1.13
SSSCA1-201ENST00000309328 FGFR2P21802 821 aa22.08■■□□□ 1.13
SSSCA1-201ENST00000309328 SLC51AQ86UW1 340 aa22.08■■□□□ 1.13
SSSCA1-201ENST00000309328 DCTPP1Q9H773 170 aa22.08■■□□□ 1.13
SSSCA1-201ENST00000309328 ZNRF3Q9ULT6 936 aa22.08■■□□□ 1.13
SSSCA1-201ENST00000309328 TFCP2Q12800 502 aa22.07■■□□□ 1.12
SSSCA1-201ENST00000309328 ERICH6BQ5W0A0 696 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms