RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 TRERF1Q96PN7 1200 aa13.02□□□□□ -0.33
PTPN7-201ENST00000309017 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.02□□□□□ -0.33
PTPN7-201ENST00000309017 U3KPZ7 1027 aaPredicted RBP13.02□□□□□ -0.33
PTPN7-201ENST00000309017 HOXB7P09629 217 aa13.01□□□□□ -0.33
PTPN7-201ENST00000309017 TERF2Q15554 542 aa13.01□□□□□ -0.33
PTPN7-201ENST00000309017 NEUROD6Q96NK8 337 aa13.01□□□□□ -0.33
PTPN7-201ENST00000309017 NCOA5Q9HCD5 579 aaKnown RBP13.01□□□□□ -0.33
PTPN7-201ENST00000309017 A0A1B0GVL5 298 aa13.01□□□□□ -0.33
PTPN7-201ENST00000309017 FAM160A1Q05DH4 1040 aa13.01□□□□□ -0.33
PTPN7-201ENST00000309017 SCRN1Q12765 414 aa13.01□□□□□ -0.33
PTPN7-201ENST00000309017 ISM2Q6H9L7 571 aa13.01□□□□□ -0.33
PTPN7-201ENST00000309017 FAM177A1Q8N128 213 aaPredicted RBP13.01□□□□□ -0.33
PTPN7-201ENST00000309017 IFNKQ9P0W0 207 aa13.01□□□□□ -0.33
PTPN7-201ENST00000309017 PRAMEF22A3QJZ6 481 aa13.01□□□□□ -0.33
PTPN7-201ENST00000309017 LTKP29376 864 aa13.01□□□□□ -0.33
PTPN7-201ENST00000309017 SARM1Q6SZW1 724 aa13.01□□□□□ -0.33
PTPN7-201ENST00000309017 CHST3Q7LGC8 479 aa13.01□□□□□ -0.33
PTPN7-201ENST00000309017 LRRC59Q96AG4 307 aaKnown RBP13.01□□□□□ -0.33
PTPN7-201ENST00000309017 GOLPH3LQ9H4A5 285 aa13.01□□□□□ -0.33
PTPN7-201ENST00000309017 ST7Q9NRC1 585 aa13.01□□□□□ -0.33
PTPN7-201ENST00000309017 TNRQ92752 1358 aa13□□□□□ -0.33
PTPN7-201ENST00000309017 SLFN14P0C7P3 912 aa13□□□□□ -0.33
PTPN7-201ENST00000309017 MAPK8IP2Q13387 824 aaPredicted RBP13□□□□□ -0.33
PTPN7-201ENST00000309017 NBPF6Q5VWK0 638 aa13□□□□□ -0.33
PTPN7-201ENST00000309017 NBPF4Q96M43 638 aa13□□□□□ -0.33
PTPN7-201ENST00000309017 BMS1Q14692 1282 aaKnown RBP13□□□□□ -0.33
PTPN7-201ENST00000309017 NOL10Q9BSC4 688 aaKnown RBP13□□□□□ -0.33
PTPN7-201ENST00000309017 CHGBP05060 677 aa13□□□□□ -0.33
PTPN7-201ENST00000309017 GNL2Q13823 731 aaKnown RBP13□□□□□ -0.33
PTPN7-201ENST00000309017 UBXN4Q92575 508 aa13□□□□□ -0.33
PTPN7-201ENST00000309017 ARGLU1Q9NWB6 273 aaPredicted RBP13□□□□□ -0.33
PTPN7-201ENST00000309017 SPATA31D1Q6ZQQ2 1576 aa13□□□□□ -0.33
PTPN7-201ENST00000309017 TMEM2Q9UHN6 1383 aa12.99□□□□□ -0.33
PTPN7-201ENST00000309017 POLR3DP05423 398 aaPredicted RBP12.99□□□□□ -0.33
PTPN7-201ENST00000309017 RBM6P78332 1123 aaKnown RBP12.99□□□□□ -0.33
PTPN7-201ENST00000309017 ARHGAP29Q52LW3 1261 aa12.99□□□□□ -0.33
PTPN7-201ENST00000309017 MRPS27Q92552 414 aaKnown RBP12.99□□□□□ -0.33
PTPN7-201ENST00000309017 RICTORQ6R327 1708 aa12.99□□□□□ -0.33
PTPN7-201ENST00000309017 XRN1Q8IZH2 1706 aaKnown RBP12.99□□□□□ -0.33
PTPN7-201ENST00000309017 POLR3GO15318 223 aaPredicted RBP12.99□□□□□ -0.33
PTPN7-201ENST00000309017 CYP21A2P08686 494 aa12.99□□□□□ -0.33
PTPN7-201ENST00000309017 CCZ1BP86790 482 aa12.99□□□□□ -0.33
PTPN7-201ENST00000309017 CCZ1P86791 482 aaPredicted RBP12.99□□□□□ -0.33
PTPN7-201ENST00000309017 MYD88Q99836 296 aa12.99□□□□□ -0.33
PTPN7-201ENST00000309017 DNAI1Q9UI46 699 aa12.99□□□□□ -0.33
PTPN7-201ENST00000309017 TECPR2O15040 1411 aa12.99□□□□□ -0.33
PTPN7-201ENST00000309017 ZBTB22O15209 634 aa12.99□□□□□ -0.33
PTPN7-201ENST00000309017 XPO4Q9C0E2 1151 aaKnown RBP12.99□□□□□ -0.33
PTPN7-201ENST00000309017 AKAP12Q02952 1782 aa12.98□□□□□ -0.33
PTPN7-201ENST00000309017 LMOD1P29536 600 aaPredicted RBP12.98□□□□□ -0.33
PTPN7-201ENST00000309017 MCMDC2Q4G0Z9 681 aa12.98□□□□□ -0.33
PTPN7-201ENST00000309017 NYAP1Q6ZVC0 841 aa12.98□□□□□ -0.33
PTPN7-201ENST00000309017 TIGD1Q96MW7 591 aa12.98□□□□□ -0.33
PTPN7-201ENST00000309017 URI1O94763 535 aaPredicted RBP12.98□□□□□ -0.33
PTPN7-201ENST00000309017 SYNE3Q6ZMZ3 975 aa12.98□□□□□ -0.33
PTPN7-201ENST00000309017 AEBP2Q6ZN18 517 aaPredicted RBP12.98□□□□□ -0.33
PTPN7-201ENST00000309017 RCOR1Q9UKL0 485 aa12.98□□□□□ -0.33
PTPN7-201ENST00000309017 GIGYF1O75420 1035 aaPredicted RBP12.98□□□□□ -0.33
PTPN7-201ENST00000309017 TFCP2Q12800 502 aa12.98□□□□□ -0.33
PTPN7-201ENST00000309017 OTUD7BQ6GQQ9 843 aa12.98□□□□□ -0.33
PTPN7-201ENST00000309017 TMCO3Q6UWJ1 677 aa12.98□□□□□ -0.33
PTPN7-201ENST00000309017 DHX40Q8IX18 779 aaKnown RBP12.98□□□□□ -0.33
PTPN7-201ENST00000309017 CCDC150Q8NCX0 1101 aa12.98□□□□□ -0.33
PTPN7-201ENST00000309017 SETD1BQ9UPS6 1966 aaKnown RBP12.97□□□□□ -0.33
PTPN7-201ENST00000309017 TUBGCP6Q96RT7 1819 aa12.97□□□□□ -0.33
PTPN7-201ENST00000309017 SLC3A2P08195 630 aaKnown RBP12.97□□□□□ -0.33
PTPN7-201ENST00000309017 AKAP4Q5JQC9 854 aa12.97□□□□□ -0.33
PTPN7-201ENST00000309017 DHX32Q7L7V1 743 aaKnown RBP12.97□□□□□ -0.33
PTPN7-201ENST00000309017 FAM208AQ9UK61 1670 aaKnown RBP12.97□□□□□ -0.33
PTPN7-201ENST00000309017 CPLX1O14810 134 aa12.97□□□□□ -0.33
PTPN7-201ENST00000309017 SERPINC1P01008 464 aa12.97□□□□□ -0.33
PTPN7-201ENST00000309017 TEX35Q5T0J7 233 aa12.97□□□□□ -0.33
PTPN7-201ENST00000309017 NAA16Q6N069 864 aaPredicted RBP12.97□□□□□ -0.33
PTPN7-201ENST00000309017 RAB11FIP4Q86YS3 637 aa12.97□□□□□ -0.33
PTPN7-201ENST00000309017 NSUN7Q8NE18 718 aaKnown RBP12.97□□□□□ -0.33
PTPN7-201ENST00000309017 HMGB1P09429 215 aaKnown RBP12.97□□□□□ -0.33
PTPN7-201ENST00000309017 DBNDD2Q9BQY9 259 aa12.97□□□□□ -0.33
PTPN7-201ENST00000309017 CALCOCO1Q9P1Z2 691 aa12.97□□□□□ -0.33
PTPN7-201ENST00000309017 GOLIM4O00461 696 aa12.96□□□□□ -0.33
PTPN7-201ENST00000309017 DPCR1Q3MIW9 517 aa12.96□□□□□ -0.33
PTPN7-201ENST00000309017 PPP1R13BQ96KQ4 1090 aa12.96□□□□□ -0.33
PTPN7-201ENST00000309017 DBNLQ9UJU6 430 aaKnown RBP12.96□□□□□ -0.33
PTPN7-201ENST00000309017 MED23Q9ULK4 1368 aa12.96□□□□□ -0.33
PTPN7-201ENST00000309017 NPHP4O75161 1426 aaPredicted RBP12.96□□□□□ -0.33
PTPN7-201ENST00000309017 PIP4K2AP48426 406 aaPredicted RBP12.96□□□□□ -0.33
PTPN7-201ENST00000309017 CEBPAP49715 358 aaPredicted RBP12.96□□□□□ -0.33
PTPN7-201ENST00000309017 CFAP100Q494V2 611 aa12.96□□□□□ -0.33
PTPN7-201ENST00000309017 LLPHQ9BRT6 129 aaKnown RBP12.96□□□□□ -0.33
PTPN7-201ENST00000309017 UBE3BQ7Z3V4 1068 aa12.96□□□□□ -0.34
PTPN7-201ENST00000309017 ALDH8A1Q9H2A2 487 aaPredicted RBP12.96□□□□□ -0.34
PTPN7-201ENST00000309017 TMX1Q9H3N1 280 aa12.96□□□□□ -0.34
PTPN7-201ENST00000309017 PCDHA7Q9UN72 937 aa12.96□□□□□ -0.34
PTPN7-201ENST00000309017 RNMTO43148 476 aaKnown RBP12.95□□□□□ -0.34
PTPN7-201ENST00000309017 PFKFB2O60825 505 aa12.95□□□□□ -0.34
PTPN7-201ENST00000309017 PSME1Q06323 249 aa12.95□□□□□ -0.34
PTPN7-201ENST00000309017 SLC39A6Q13433 755 aa12.95□□□□□ -0.34
PTPN7-201ENST00000309017 TNNI3KQ59H18 835 aa12.95□□□□□ -0.34
PTPN7-201ENST00000309017 FPGT-TNNI3KV9GXZ4 949 aa12.95□□□□□ -0.34
PTPN7-201ENST00000309017 C8orf76Q96K31 380 aa12.95□□□□□ -0.34
PTPN7-201ENST00000309017 NDUFA8P51970 172 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms