RNA–Protein interactions for RNA: ENST00000295688.7

CCT3-201, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT3, Length 2,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-201ENST00000295688 RCOR1Q9UKL0 485 aa17.43■□□□□ 0.38
CCT3-201ENST00000295688 SH3TC1Q8TE82 1336 aa17.43■□□□□ 0.38
CCT3-201ENST00000295688 ZSCAN25Q6NSZ9 544 aa17.43■□□□□ 0.38
CCT3-201ENST00000295688 DHX32Q7L7V1 743 aaKnown RBP17.43■□□□□ 0.38
CCT3-201ENST00000295688 JARID2Q92833 1246 aaPredicted RBP17.43■□□□□ 0.38
CCT3-201ENST00000295688 ZNF396Q96N95 335 aaPredicted RBP17.43■□□□□ 0.38
CCT3-201ENST00000295688 DNAJC25Q9H1X3 360 aa17.43■□□□□ 0.38
CCT3-201ENST00000295688 HELLSQ9NRZ9 838 aa17.43■□□□□ 0.38
CCT3-201ENST00000295688 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.43■□□□□ 0.381e-7■■■□□ 15.3
CCT3-201ENST00000295688 PAXBP1Q9Y5B6 917 aa17.43■□□□□ 0.38
CCT3-201ENST00000295688 MYH15Q9Y2K3 1946 aa17.43■□□□□ 0.38
CCT3-201ENST00000295688 ZNF609O15014 1411 aa17.42■□□□□ 0.38
CCT3-201ENST00000295688 SMTNL1A8MU46 457 aa17.42■□□□□ 0.38
CCT3-201ENST00000295688 CYP21A2P08686 494 aa17.42■□□□□ 0.38
CCT3-201ENST00000295688 KBTBD3Q8NAB2 608 aa17.42■□□□□ 0.38
CCT3-201ENST00000295688 EDC3Q96F86 508 aaKnown RBP17.42■□□□□ 0.38
CCT3-201ENST00000295688 CLIP2Q9UDT6 1046 aa17.42■□□□□ 0.38
CCT3-201ENST00000295688 AFDNP55196 1824 aaKnown RBP17.42■□□□□ 0.38
CCT3-201ENST00000295688 SNRPA1P09661 255 aaKnown RBP17.42■□□□□ 0.38
CCT3-201ENST00000295688 STX1AQ16623 288 aa17.42■□□□□ 0.38
CCT3-201ENST00000295688 TSC1Q92574 1164 aa17.42■□□□□ 0.38
CCT3-201ENST00000295688 PLEKHG2Q9H7P9 1386 aa17.42■□□□□ 0.38
CCT3-201ENST00000295688 TATP17735 454 aaPredicted RBP17.41■□□□□ 0.38
CCT3-201ENST00000295688 SCRN1Q12765 414 aa17.41■□□□□ 0.38
CCT3-201ENST00000295688 MRFAP1L1Q96HT8 127 aa17.41■□□□□ 0.38
CCT3-201ENST00000295688 DNAJC2Q99543 621 aaKnown RBP17.41■□□□□ 0.38
CCT3-201ENST00000295688 DSCC1Q9BVC3 393 aa17.41■□□□□ 0.38
CCT3-201ENST00000295688 PALLDQ8WX93 1383 aa17.41■□□□□ 0.38
CCT3-201ENST00000295688 SLC39A6Q13433 755 aa17.4■□□□□ 0.38
CCT3-201ENST00000295688 PPP4R3BQ5MIZ7 849 aa17.4■□□□□ 0.38
CCT3-201ENST00000295688 CCDC73Q6ZRK6 1079 aa17.4■□□□□ 0.38
CCT3-201ENST00000295688 LMOD2Q6P5Q4 547 aa17.4■□□□□ 0.38
CCT3-201ENST00000295688 TTC5Q8N0Z6 440 aa17.4■□□□□ 0.38
CCT3-201ENST00000295688 DBNDD2Q9BQY9 259 aa17.4■□□□□ 0.38
CCT3-201ENST00000295688 GPR108Q9NPR9 543 aa17.4■□□□□ 0.38
CCT3-201ENST00000295688 AXIN2Q9Y2T1 843 aa17.4■□□□□ 0.38
CCT3-201ENST00000295688 ERBB3P21860 1342 aa17.4■□□□□ 0.38
CCT3-201ENST00000295688 PHKG2P15735 406 aa17.39■□□□□ 0.37
CCT3-201ENST00000295688 IQCB1Q15051 598 aa17.39■□□□□ 0.37
CCT3-201ENST00000295688 ATP2B3Q16720 1220 aa17.39■□□□□ 0.37
CCT3-201ENST00000295688 CCAR1Q8IX12 1150 aaKnown RBP17.39■□□□□ 0.37
CCT3-201ENST00000295688 IFNL2Q8IZJ0 200 aa17.39■□□□□ 0.37
CCT3-201ENST00000295688 NSUN7Q8NE18 718 aaKnown RBP17.39■□□□□ 0.37
CCT3-201ENST00000295688 DDX11Q96FC9 970 aa17.39■□□□□ 0.37
CCT3-201ENST00000295688 ARID3AQ99856 593 aa17.39■□□□□ 0.37
CCT3-201ENST00000295688 TNNT1P13805 278 aa17.39■□□□□ 0.37
CCT3-201ENST00000295688 NFATC2IPQ8NCF5 419 aa17.39■□□□□ 0.37
CCT3-201ENST00000295688 AGXT2Q9BYV1 514 aa17.39■□□□□ 0.37
CCT3-201ENST00000295688 ANO10Q9NW15 660 aa17.39■□□□□ 0.37
CCT3-201ENST00000295688 LAMA4Q16363 1823 aa17.39■□□□□ 0.37
CCT3-201ENST00000295688 ABCC6O95255 1503 aa17.38■□□□□ 0.37
CCT3-201ENST00000295688 TRPM3Q9HCF6 1732 aaPredicted RBP17.38■□□□□ 0.37
CCT3-201ENST00000295688 KDM6AO15550 1401 aaPredicted RBP17.38■□□□□ 0.37
CCT3-201ENST00000295688 KINO60870 393 aaKnown RBP17.38■□□□□ 0.37
CCT3-201ENST00000295688 ADD1P35611 737 aaKnown RBP17.38■□□□□ 0.37
CCT3-201ENST00000295688 CCDC129Q6ZRS4 1044 aa17.38■□□□□ 0.37
CCT3-201ENST00000295688 UBE3BQ7Z3V4 1068 aa17.38■□□□□ 0.37
CCT3-201ENST00000295688 LRP10Q7Z4F1 713 aa17.38■□□□□ 0.37
CCT3-201ENST00000295688 ZNF496Q96IT1 587 aaPredicted RBP17.38■□□□□ 0.37
CCT3-201ENST00000295688 FMNL2Q96PY5 1086 aa17.38■□□□□ 0.37
CCT3-201ENST00000295688 ORAI2Q96SN7 254 aa17.38■□□□□ 0.37
CCT3-201ENST00000295688 NRBP1Q9UHY1 535 aa17.38■□□□□ 0.37
CCT3-201ENST00000295688 RGPD5Q99666 1765 aa17.38■□□□□ 0.37
CCT3-201ENST00000295688 MST1RQ04912 1400 aa17.38■□□□□ 0.37
CCT3-201ENST00000295688 A0A087WZG4 1122 aa17.38■□□□□ 0.37
CCT3-201ENST00000295688 BECN2A8MW95 431 aa17.38■□□□□ 0.37
CCT3-201ENST00000295688 KIF20AO95235 890 aa17.38■□□□□ 0.37
CCT3-201ENST00000295688 EXOSC10Q01780 885 aaKnown RBP17.38■□□□□ 0.37
CCT3-201ENST00000295688 LRMPQ12912 555 aa17.38■□□□□ 0.37
CCT3-201ENST00000295688 KRT28Q7Z3Y7 464 aa17.38■□□□□ 0.37
CCT3-201ENST00000295688 ZNF274Q96GC6 653 aaPredicted RBP17.38■□□□□ 0.37
CCT3-201ENST00000295688 FEZ1Q99689 392 aa17.38■□□□□ 0.37
CCT3-201ENST00000295688 ARFGEF2Q9Y6D5 1785 aa17.37■□□□□ 0.37
CCT3-201ENST00000295688 TPD52L1Q16890 204 aaPredicted RBP17.37■□□□□ 0.37
CCT3-201ENST00000295688 PLBD2Q8NHP8 589 aa17.37■□□□□ 0.37
CCT3-201ENST00000295688 RBM33Q96EV2 1170 aaKnown RBP17.37■□□□□ 0.37
CCT3-201ENST00000295688 SEC62Q99442 399 aaKnown RBP17.37■□□□□ 0.37
CCT3-201ENST00000295688 NAT10Q9H0A0 1025 aaKnown RBP17.37■□□□□ 0.37
CCT3-201ENST00000295688 PTPDC1A2A3K4 754 aa17.36■□□□□ 0.37
CCT3-201ENST00000295688 FAM160A1Q05DH4 1040 aa17.36■□□□□ 0.37
CCT3-201ENST00000295688 DDX46Q7L014 1031 aaKnown RBP17.36■□□□□ 0.37
CCT3-201ENST00000295688 CACTINQ8WUQ7 758 aaKnown RBP17.36■□□□□ 0.37
CCT3-201ENST00000295688 KIF1AQ12756 1690 aa17.36■□□□□ 0.37
CCT3-201ENST00000295688 ZNF142P52746 1687 aaPredicted RBP17.36■□□□□ 0.37
CCT3-201ENST00000295688 RBM6P78332 1123 aaKnown RBP17.36■□□□□ 0.37
CCT3-201ENST00000295688 STOX1Q6ZVD7 989 aa17.36■□□□□ 0.37
CCT3-201ENST00000295688 LRRC8AQ8IWT6 810 aa17.36■□□□□ 0.37
CCT3-201ENST00000295688 CCDC112Q8NEF3 446 aa17.36■□□□□ 0.37
CCT3-201ENST00000295688 DCAF5Q96JK2 942 aa17.36■□□□□ 0.37
CCT3-201ENST00000295688 C16orf45Q96MC5 204 aaPredicted RBP17.36■□□□□ 0.37
CCT3-201ENST00000295688 PAG1Q9NWQ8 432 aa17.36■□□□□ 0.37
CCT3-201ENST00000295688 CASP7P55210 303 aa17.35■□□□□ 0.37
CCT3-201ENST00000295688 LRRFIP1Q32MZ4 808 aaKnown RBP17.35■□□□□ 0.37
CCT3-201ENST00000295688 ZMYM1Q5SVZ6 1142 aa17.35■□□□□ 0.37
CCT3-201ENST00000295688 PRDM10Q9NQV6 1147 aa17.35■□□□□ 0.37
CCT3-201ENST00000295688 USP16Q9Y5T5 823 aa17.35■□□□□ 0.37
CCT3-201ENST00000295688 FAM177BA6PVY3 158 aa17.35■□□□□ 0.37
CCT3-201ENST00000295688 DHX8Q14562 1220 aaKnown RBP17.35■□□□□ 0.37
CCT3-201ENST00000295688 CEP57L1Q8IYX8 460 aa17.35■□□□□ 0.37
CCT3-201ENST00000295688 FBXL16Q8N461 479 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms