RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 RIPOR2Q9Y4F9 1068 aa28.1■■■□□ 2.09
LINC01116-201ENST00000295549 SLC51AQ86UW1 340 aa28.09■■■□□ 2.09
LINC01116-201ENST00000295549 PUS3Q9BZE2 481 aaKnown RBP28.09■■■□□ 2.09
LINC01116-201ENST00000295549 PA2G4Q9UQ80 394 aaKnown RBP28.09■■■□□ 2.09
LINC01116-201ENST00000295549 PCDHB15Q9Y5E8 787 aa28.09■■■□□ 2.09
LINC01116-201ENST00000295549 ARFGEF1Q9Y6D6 1849 aa28.09■■■□□ 2.09
LINC01116-201ENST00000295549 SNED1Q8TER0 1413 aa28.09■■■□□ 2.09
LINC01116-201ENST00000295549 EYA2O00167 538 aa28.09■■■□□ 2.09
LINC01116-201ENST00000295549 CIAO1O76071 339 aa28.09■■■□□ 2.09
LINC01116-201ENST00000295549 LRRC24Q50LG9 513 aa28.08■■■□□ 2.09
LINC01116-201ENST00000295549 PODXL2Q9NZ53 605 aa28.08■■■□□ 2.09
LINC01116-201ENST00000295549 CHRNDQ07001 517 aa28.07■■■□□ 2.08
LINC01116-201ENST00000295549 MPNDQ8N594 471 aa28.07■■■□□ 2.08
LINC01116-201ENST00000295549 ANKRD2Q9GZV1 360 aa28.07■■■□□ 2.08
LINC01116-201ENST00000295549 CACNA1SQ13698 1873 aa28.07■■■□□ 2.08
LINC01116-201ENST00000295549 LRRC37AA6NMS7 1700 aa28.06■■■□□ 2.08
LINC01116-201ENST00000295549 XDHP47989 1333 aa28.06■■■□□ 2.08
LINC01116-201ENST00000295549 MROH5Q6ZUA9 1318 aa28.06■■■□□ 2.08
LINC01116-201ENST00000295549 DCAF8L1A6NGE4 600 aa28.06■■■□□ 2.08
LINC01116-201ENST00000295549 ATG9AQ7Z3C6 839 aa28.06■■■□□ 2.08
LINC01116-201ENST00000295549 SIL1Q9H173 461 aa28.06■■■□□ 2.08
LINC01116-201ENST00000295549 ANKIB1Q9P2G1 1089 aa28.06■■■□□ 2.08
LINC01116-201ENST00000295549 NSFL1CQ9UNZ2 370 aaKnown RBP28.06■■■□□ 2.08
LINC01116-201ENST00000295549 NOP58Q9Y2X3 529 aaKnown RBP28.06■■■□□ 2.08
LINC01116-201ENST00000295549 IL15P40933 162 aaPredicted RBP28.05■■■□□ 2.08
LINC01116-201ENST00000295549 GPSM2P81274 684 aa28.05■■■□□ 2.08
LINC01116-201ENST00000295549 DPP8Q6V1X1 898 aaPredicted RBP28.05■■■□□ 2.08
LINC01116-201ENST00000295549 PSMD1Q99460 953 aa28.05■■■□□ 2.08
LINC01116-201ENST00000295549 ARHGAP27Q6ZUM4 889 aa28.04■■■□□ 2.08
LINC01116-201ENST00000295549 RTFDC1Q9BY42 306 aaPredicted RBP28.04■■■□□ 2.08
LINC01116-201ENST00000295549 LTBP3Q9NS15 1303 aa28.03■■■□□ 2.08
LINC01116-201ENST00000295549 NFKBIEO00221 500 aa28.03■■■□□ 2.08
LINC01116-201ENST00000295549 NEFLP07196 543 aa28.03■■■□□ 2.08
LINC01116-201ENST00000295549 SURF6O75683 361 aaKnown RBP28.02■■■□□ 2.08
LINC01116-201ENST00000295549 FKBP4Q02790 459 aaKnown RBP eCLIP28.02■■■□□ 2.08
LINC01116-201ENST00000295549 G3BP1Q13283 466 aaKnown RBP eCLIP28.02■■■□□ 2.08
LINC01116-201ENST00000295549 TAOK3Q9H2K8 898 aa28.02■■■□□ 2.08
LINC01116-201ENST00000295549 METTL24Q5JXM2 366 aa28.01■■■□□ 2.08
LINC01116-201ENST00000295549 GGA1Q9UJY5 639 aa28.01■■■□□ 2.08
LINC01116-201ENST00000295549 VGLL2Q8N8G2 317 aa28.01■■■□□ 2.07
LINC01116-201ENST00000295549 SUPT20HQ8NEM7 779 aa28.01■■■□□ 2.07
LINC01116-201ENST00000295549 TBC1D16Q8TBP0 767 aa28.01■■■□□ 2.07
LINC01116-201ENST00000295549 POLLQ9UGP5 575 aa28.01■■■□□ 2.07
LINC01116-201ENST00000295549 LEMD3Q9Y2U8 911 aa28.01■■■□□ 2.07
LINC01116-201ENST00000295549 TAF5LO75529 589 aa28■■■□□ 2.07
LINC01116-201ENST00000295549 ATP2B4P23634 1241 aa28■■■□□ 2.07
LINC01116-201ENST00000295549 HSP90AB4PQ58FF6 505 aa28■■■□□ 2.07
LINC01116-201ENST00000295549 HELBQ8NG08 1087 aaPredicted RBP28■■■□□ 2.07
LINC01116-201ENST00000295549 PDE8BO95263 885 aa27.99■■■□□ 2.07
LINC01116-201ENST00000295549 HDAC1Q13547 482 aaPredicted RBP27.99■■■□□ 2.07
LINC01116-201ENST00000295549 CEP126Q9P2H0 1117 aa27.99■■■□□ 2.07
LINC01116-201ENST00000295549 SPEF2Q9C093 1822 aa27.99■■■□□ 2.07
LINC01116-201ENST00000295549 UFL1O94874 794 aa27.98■■■□□ 2.07
LINC01116-201ENST00000295549 VPS33BQ9H267 617 aa27.98■■■□□ 2.07
LINC01116-201ENST00000295549 FER1L6Q2WGJ9 1857 aa27.98■■■□□ 2.07
LINC01116-201ENST00000295549 LTBP1Q14766 1721 aa27.97■■■□□ 2.07
LINC01116-201ENST00000295549 ZNF804BA4D1E1 1349 aa27.96■■■□□ 2.07
LINC01116-201ENST00000295549 C6orf229H3BNL8 230 aa27.96■■■□□ 2.07
LINC01116-201ENST00000295549 OS9Q13438 667 aaPredicted RBP27.96■■■□□ 2.07
LINC01116-201ENST00000295549 UBE4AQ14139 1066 aa27.96■■■□□ 2.07
LINC01116-201ENST00000295549 DCTPP1Q9H773 170 aa27.96■■■□□ 2.07
LINC01116-201ENST00000295549 EXOC6BQ9Y2D4 811 aa27.96■■■□□ 2.07
LINC01116-201ENST00000295549 DUOX1Q9NRD9 1551 aa27.96■■■□□ 2.07
LINC01116-201ENST00000295549 WTIPA6NIX2 430 aaPredicted RBP27.95■■■□□ 2.07
LINC01116-201ENST00000295549 SASH1O94885 1247 aa27.95■■■□□ 2.07
LINC01116-201ENST00000295549 RASSF7Q02833 373 aa27.95■■■□□ 2.07
LINC01116-201ENST00000295549 ERC1Q8IUD2 1116 aa27.95■■■□□ 2.07
LINC01116-201ENST00000295549 EYA3Q99504 573 aa27.95■■■□□ 2.07
LINC01116-201ENST00000295549 ZNF277Q9NRM2 450 aaPredicted RBP27.95■■■□□ 2.07
LINC01116-201ENST00000295549 KCNJ4P48050 445 aa27.94■■■□□ 2.06
LINC01116-201ENST00000295549 RWDD1Q9H446 243 aaPredicted RBP27.94■■■□□ 2.06
LINC01116-201ENST00000295549 RAB11FIP3O75154 756 aa27.93■■■□□ 2.06
LINC01116-201ENST00000295549 LMNB1P20700 586 aa27.93■■■□□ 2.06
LINC01116-201ENST00000295549 TFCP2Q12800 502 aa27.93■■■□□ 2.06
LINC01116-201ENST00000295549 PUM3Q15397 648 aaKnown RBP27.93■■■□□ 2.06
LINC01116-201ENST00000295549 WASHC4Q2M389 1173 aa27.93■■■□□ 2.06
LINC01116-201ENST00000295549 SNAP23O00161 211 aa27.92■■■□□ 2.06
LINC01116-201ENST00000295549 FGFR2P21802 821 aa27.92■■■□□ 2.06
LINC01116-201ENST00000295549 PRELPP51888 382 aa27.92■■■□□ 2.06
LINC01116-201ENST00000295549 KIAA2012Q0VF49 1180 aa27.92■■■□□ 2.06
LINC01116-201ENST00000295549 C15orf52Q6ZUT6 534 aaKnown RBP27.92■■■□□ 2.06
LINC01116-201ENST00000295549 IARSP41252 1262 aaKnown RBP27.92■■■□□ 2.06
LINC01116-201ENST00000295549 AKAP2Q9Y2D5 859 aa27.92■■■□□ 2.06
LINC01116-201ENST00000295549 MED23Q9ULK4 1368 aa27.91■■■□□ 2.06
LINC01116-201ENST00000295549 ERICH6BQ5W0A0 696 aa27.91■■■□□ 2.06
LINC01116-201ENST00000295549 LPIN2Q92539 896 aa27.91■■■□□ 2.06
LINC01116-201ENST00000295549 ZC3H12CQ9C0D7 883 aaKnown RBP27.91■■■□□ 2.06
LINC01116-201ENST00000295549 GPR108Q9NPR9 543 aa27.91■■■□□ 2.06
LINC01116-201ENST00000295549 PPIP5K2O43314 1243 aa27.9■■■□□ 2.06
LINC01116-201ENST00000295549 RHPN1Q8TCX5 695 aa27.9■■■□□ 2.06
LINC01116-201ENST00000295549 KIF1BPQ96EK5 621 aa27.9■■■□□ 2.06
LINC01116-201ENST00000295549 GPR101Q96P66 508 aaPredicted RBP27.9■■■□□ 2.06
LINC01116-201ENST00000295549 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.9■■■□□ 2.06
LINC01116-201ENST00000295549 IRS2Q9Y4H2 1338 aa27.9■■■□□ 2.06
LINC01116-201ENST00000295549 AOC3Q16853 763 aa27.89■■■□□ 2.06
LINC01116-201ENST00000295549 IGHDP01880 384 aa27.88■■■□□ 2.05
LINC01116-201ENST00000295549 IFIT1P09914 478 aaKnown RBP27.88■■■□□ 2.05
LINC01116-201ENST00000295549 ATP2B3Q16720 1220 aa27.88■■■□□ 2.05
LINC01116-201ENST00000295549 LARGE2Q8N3Y3 721 aa27.88■■■□□ 2.05
LINC01116-201ENST00000295549 GCC1Q96CN9 775 aa27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms