RNA–Protein interactions for RNA: ENST00000290037.10

SEC16A-202, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 8,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-202ENST00000290037 WDR78Q5VTH9 848 aa16.85■□□□□ 0.29
SEC16A-202ENST00000290037 LINS1Q8NG48 757 aa16.85■□□□□ 0.29
SEC16A-202ENST00000290037 HELLSQ9NRZ9 838 aa16.85■□□□□ 0.29
SEC16A-202ENST00000290037 ATP8B2P98198 1209 aa16.85■□□□□ 0.29
SEC16A-202ENST00000290037 SBNO1A3KN83 1393 aa16.85■□□□□ 0.29
SEC16A-202ENST00000290037 PIBF1Q8WXW3 757 aa16.85■□□□□ 0.29
SEC16A-202ENST00000290037 ATP7BP35670 1465 aa16.85■□□□□ 0.29
SEC16A-202ENST00000290037 SYKP43405 635 aa16.85■□□□□ 0.29
SEC16A-202ENST00000290037 C1orf115Q9H7X2 142 aa16.85■□□□□ 0.29
SEC16A-202ENST00000290037 SWAP70Q9UH65 585 aa16.85■□□□□ 0.29
SEC16A-202ENST00000290037 IFIT3O14879 490 aaKnown RBP16.85■□□□□ 0.29
SEC16A-202ENST00000290037 POLR3DP05423 398 aaPredicted RBP16.85■□□□□ 0.29
SEC16A-202ENST00000290037 KSR2Q6VAB6 950 aa16.85■□□□□ 0.29
SEC16A-202ENST00000290037 ANKRD2Q9GZV1 360 aa16.85■□□□□ 0.29
SEC16A-202ENST00000290037 HSF2BPO75031 334 aa16.85■□□□□ 0.29
SEC16A-202ENST00000290037 FBXO3Q9UK99 471 aa16.85■□□□□ 0.29
SEC16A-202ENST00000290037 RAB3GAP1Q15042 981 aa16.84■□□□□ 0.29
SEC16A-202ENST00000290037 NEBLO76041 1014 aa16.84■□□□□ 0.29
SEC16A-202ENST00000290037 TSNARE1Q96NA8 513 aa16.84■□□□□ 0.29
SEC16A-202ENST00000290037 KAT14Q9H8E8 782 aa16.84■□□□□ 0.29
SEC16A-202ENST00000290037 CSRNP2Q9H175 543 aa16.84■□□□□ 0.29
SEC16A-202ENST00000290037 KDM5CP41229 1560 aa16.84■□□□□ 0.29
SEC16A-202ENST00000290037 ATP10AO60312 1499 aa16.84■□□□□ 0.29
SEC16A-202ENST00000290037 HOOK2Q96ED9 719 aa16.84■□□□□ 0.29
SEC16A-202ENST00000290037 HAUS2Q9NVX0 235 aa16.84■□□□□ 0.29
SEC16A-202ENST00000290037 SPHKAPQ2M3C7 1700 aa16.84■□□□□ 0.29
SEC16A-202ENST00000290037 PCP11498 1178 aaKnown RBP16.84■□□□□ 0.29
SEC16A-202ENST00000290037 CEP135Q66GS9 1140 aa16.84■□□□□ 0.29
SEC16A-202ENST00000290037 CCDC50Q8IVM0 306 aa16.84■□□□□ 0.29
SEC16A-202ENST00000290037 RPGRQ92834 1020 aaKnown RBP16.84■□□□□ 0.29
SEC16A-202ENST00000290037 TACC1O75410 805 aa16.83■□□□□ 0.29
SEC16A-202ENST00000290037 CCDC14Q49A88 953 aa16.83■□□□□ 0.28
SEC16A-202ENST00000290037 TBCAO75347 108 aaKnown RBP16.83■□□□□ 0.28
SEC16A-202ENST00000290037 PZPP20742 1482 aa16.83■□□□□ 0.28
SEC16A-202ENST00000290037 GJB2P29033 226 aa16.83■□□□□ 0.28
SEC16A-202ENST00000290037 ESYT1Q9BSJ8 1104 aa16.83■□□□□ 0.28
SEC16A-202ENST00000290037 SH2D4AQ9H788 454 aa16.83■□□□□ 0.28
SEC16A-202ENST00000290037 IKBKGQ9Y6K9 419 aa16.83■□□□□ 0.28
SEC16A-202ENST00000290037 GRM8O00222 908 aa16.82■□□□□ 0.28
SEC16A-202ENST00000290037 TMEM67Q5HYA8 995 aa16.82■□□□□ 0.28
SEC16A-202ENST00000290037 CRACR2BQ8N4Y2 399 aaPredicted RBP16.82■□□□□ 0.28
SEC16A-202ENST00000290037 ATP2A2P16615 1042 aaKnown RBP16.82■□□□□ 0.28
SEC16A-202ENST00000290037 NUP58Q9BVL2 599 aa16.82■□□□□ 0.28
SEC16A-202ENST00000290037 ZKSCAN5Q9Y2L8 839 aa16.82■□□□□ 0.28
SEC16A-202ENST00000290037 ADCY5O95622 1261 aa16.82■□□□□ 0.28
SEC16A-202ENST00000290037 RPL13P26373 211 aaKnown RBP16.82■□□□□ 0.28
SEC16A-202ENST00000290037 YTHDC2Q9H6S0 1430 aaKnown RBP16.82■□□□□ 0.28
SEC16A-202ENST00000290037 DKC1O60832 514 aaKnown RBP eCLIP16.82■□□□□ 0.28
SEC16A-202ENST00000290037 SPATS2Q86XZ4 545 aaKnown RBP16.82■□□□□ 0.28
SEC16A-202ENST00000290037 EXOC6BQ9Y2D4 811 aa16.82■□□□□ 0.28
SEC16A-202ENST00000290037 SAMD9LQ8IVG5 1584 aa16.82■□□□□ 0.28
SEC16A-202ENST00000290037 GOLGA1Q92805 767 aa16.82■□□□□ 0.28
SEC16A-202ENST00000290037 MYL6BP14649 208 aa16.82■□□□□ 0.28
SEC16A-202ENST00000290037 ALDH3A1P30838 453 aa16.82■□□□□ 0.28
SEC16A-202ENST00000290037 NLRP5P59047 1200 aa16.82■□□□□ 0.28
SEC16A-202ENST00000290037 ST5P78524 1137 aa16.81■□□□□ 0.28
SEC16A-202ENST00000290037 WTAPQ15007 396 aa16.81■□□□□ 0.28
SEC16A-202ENST00000290037 CCDC174Q6PII3 467 aa16.81■□□□□ 0.28
SEC16A-202ENST00000290037 SIL1Q9H173 461 aa16.81■□□□□ 0.28
SEC16A-202ENST00000290037 ERBB4Q15303 1308 aa16.81■□□□□ 0.28
SEC16A-202ENST00000290037 ZBTB43O43298 467 aa16.81■□□□□ 0.28
SEC16A-202ENST00000290037 MTIF2P46199 727 aaKnown RBP16.81■□□□□ 0.28
SEC16A-202ENST00000290037 CABP5Q9NP86 173 aa16.81■□□□□ 0.28
SEC16A-202ENST00000290037 MAST3O60307 1309 aa16.81■□□□□ 0.28
SEC16A-202ENST00000290037 NUTM2AQ8IVF1 878 aaPredicted RBP16.81■□□□□ 0.28
SEC16A-202ENST00000290037 CDC42BPBQ9Y5S2 1711 aa16.81■□□□□ 0.28
SEC16A-202ENST00000290037 GBP1P32455 592 aa16.81■□□□□ 0.28
SEC16A-202ENST00000290037 MBIPQ9NS73 344 aa16.81■□□□□ 0.28
SEC16A-202ENST00000290037 PDE1AP54750 535 aa16.81■□□□□ 0.28
SEC16A-202ENST00000290037 KIAA0753Q2KHM9 967 aa16.81■□□□□ 0.28
SEC16A-202ENST00000290037 RILPL1Q5EBL4 403 aa16.81■□□□□ 0.28
SEC16A-202ENST00000290037 TMEM87BQ96K49 555 aa16.81■□□□□ 0.28
SEC16A-202ENST00000290037 TIGD1Q96MW7 591 aa16.81■□□□□ 0.28
SEC16A-202ENST00000290037 ELP1O95163 1332 aa16.8■□□□□ 0.28
SEC16A-202ENST00000290037 FAM135BQ49AJ0 1406 aa16.8■□□□□ 0.28
SEC16A-202ENST00000290037 CTAGE15A4D2H0 777 aa16.8■□□□□ 0.28
SEC16A-202ENST00000290037 CTAGE8P0CG41 777 aa16.8■□□□□ 0.28
SEC16A-202ENST00000290037 VAV2P52735 878 aa16.8■□□□□ 0.28
SEC16A-202ENST00000290037 ZSCAN23Q3MJ62 389 aa16.8■□□□□ 0.28
SEC16A-202ENST00000290037 CTAGE6Q86UF2 777 aa16.8■□□□□ 0.28
SEC16A-202ENST00000290037 CTAGE4Q8IX94 777 aa16.8■□□□□ 0.28
SEC16A-202ENST00000290037 RHPN1Q8TCX5 695 aa16.8■□□□□ 0.28
SEC16A-202ENST00000290037 FERP16591 822 aa16.8■□□□□ 0.28
SEC16A-202ENST00000290037 HSPA4P34932 840 aa16.8■□□□□ 0.28
SEC16A-202ENST00000290037 CEBPZQ03701 1054 aaKnown RBP16.8■□□□□ 0.28
SEC16A-202ENST00000290037 ABCD1P33897 745 aa16.8■□□□□ 0.28
SEC16A-202ENST00000290037 STK3Q13188 491 aa16.8■□□□□ 0.28
SEC16A-202ENST00000290037 DDX46Q7L014 1031 aaKnown RBP16.8■□□□□ 0.28
SEC16A-202ENST00000290037 PLCD1P51178 756 aa16.79■□□□□ 0.28
SEC16A-202ENST00000290037 ANKRD13DQ6ZTN6 518 aa16.79■□□□□ 0.28
SEC16A-202ENST00000290037 B4GALNT4Q76KP1 1039 aa16.79■□□□□ 0.28
SEC16A-202ENST00000290037 GSTTP1A0A1W2PQM5 241 aa16.79■□□□□ 0.28
SEC16A-202ENST00000290037 HECW2Q9P2P5 1572 aa16.79■□□□□ 0.28
SEC16A-202ENST00000290037 PLEKHG1Q9ULL1 1385 aa16.79■□□□□ 0.28
SEC16A-202ENST00000290037 ATP2B1P20020 1258 aa16.79■□□□□ 0.28
SEC16A-202ENST00000290037 IBTKQ9P2D0 1353 aaPredicted RBP16.79■□□□□ 0.28
SEC16A-202ENST00000290037 ZNF804AQ7Z570 1209 aa16.79■□□□□ 0.28
SEC16A-202ENST00000290037 RRS1Q15050 365 aaKnown RBP16.79■□□□□ 0.28
SEC16A-202ENST00000290037 KIAA1210Q9ULL0 1709 aa16.79■□□□□ 0.28
SEC16A-202ENST00000290037 TRIM37O94972 964 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms