RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 ACEP12821 1306 aa18.8■□□□□ 0.6
SH3RF1-201ENST00000284637 NPHP3Q7Z494 1330 aa18.8■□□□□ 0.6
SH3RF1-201ENST00000284637 NBPF11Q86T75 865 aa18.8■□□□□ 0.6
SH3RF1-201ENST00000284637 EHBP1Q8NDI1 1231 aa18.8■□□□□ 0.6
SH3RF1-201ENST00000284637 PPP1R1BQ9UD71 204 aaPredicted RBP18.8■□□□□ 0.6
SH3RF1-201ENST00000284637 KDM2BQ8NHM5 1336 aa18.8■□□□□ 0.6
SH3RF1-201ENST00000284637 CHST3Q7LGC8 479 aa18.79■□□□□ 0.6
SH3RF1-201ENST00000284637 TRMT1LQ7Z2T5 733 aaKnown RBP18.79■□□□□ 0.6
SH3RF1-201ENST00000284637 VPS18Q9P253 973 aa18.79■□□□□ 0.6
SH3RF1-201ENST00000284637 CLGNO14967 610 aa18.79■□□□□ 0.6
SH3RF1-201ENST00000284637 SPTLC2O15270 562 aa18.79■□□□□ 0.6
SH3RF1-201ENST00000284637 HSPA4P34932 840 aa18.79■□□□□ 0.6
SH3RF1-201ENST00000284637 TUBB4BP68371 445 aa18.79■□□□□ 0.6
SH3RF1-201ENST00000284637 SYT10Q6XYQ8 523 aa18.79■□□□□ 0.6
SH3RF1-201ENST00000284637 RTL1A6NKG5 1358 aa18.79■□□□□ 0.6
SH3RF1-201ENST00000284637 WTAPQ15007 396 aa18.79■□□□□ 0.6
SH3RF1-201ENST00000284637 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.79■□□□□ 0.6
SH3RF1-201ENST00000284637 KIF5BP33176 963 aa18.79■□□□□ 0.6
SH3RF1-201ENST00000284637 GOLGA1Q92805 767 aa18.79■□□□□ 0.6
SH3RF1-201ENST00000284637 HSF2BPO75031 334 aa18.78■□□□□ 0.6
SH3RF1-201ENST00000284637 CPA1P15085 419 aa18.78■□□□□ 0.6
SH3RF1-201ENST00000284637 DESP17661 470 aa18.78■□□□□ 0.6
SH3RF1-201ENST00000284637 INTS4Q96HW7 963 aaKnown RBP18.78■□□□□ 0.6
SH3RF1-201ENST00000284637 IFNKQ9P0W0 207 aa18.78■□□□□ 0.6
SH3RF1-201ENST00000284637 PYM1Q9BRP8 204 aaKnown RBP18.78■□□□□ 0.6
SH3RF1-201ENST00000284637 CHMLP26374 656 aa18.77■□□□□ 0.6
SH3RF1-201ENST00000284637 KARSQ15046 597 aaKnown RBP18.77■□□□□ 0.6
SH3RF1-201ENST00000284637 CTAGE1Q96RT6 745 aa18.77■□□□□ 0.6
SH3RF1-201ENST00000284637 TAOK3Q9H2K8 898 aa18.77■□□□□ 0.6
SH3RF1-201ENST00000284637 KAT14Q9H8E8 782 aa18.77■□□□□ 0.6
SH3RF1-201ENST00000284637 PHACTR2O75167 634 aa18.77■□□□□ 0.6
SH3RF1-201ENST00000284637 CKAP4Q07065 602 aaKnown RBP18.77■□□□□ 0.6
SH3RF1-201ENST00000284637 TNIP1Q15025 636 aa18.77■□□□□ 0.6
SH3RF1-201ENST00000284637 CEP112Q8N8E3 955 aa18.77■□□□□ 0.6
SH3RF1-201ENST00000284637 POLR3AO14802 1390 aaPredicted RBP18.77■□□□□ 0.59
SH3RF1-201ENST00000284637 CYLC1P35663 651 aaPredicted RBP18.77■□□□□ 0.59
SH3RF1-201ENST00000284637 XAGE3Q8WTP9 111 aa18.77■□□□□ 0.59
SH3RF1-201ENST00000284637 GRM8O00222 908 aa18.76■□□□□ 0.59
SH3RF1-201ENST00000284637 PPM1EQ8WY54 764 aa18.76■□□□□ 0.59
SH3RF1-201ENST00000284637 LZTFL1Q9NQ48 299 aa18.76■□□□□ 0.59
SH3RF1-201ENST00000284637 CREB3L3Q68CJ9 461 aa18.76■□□□□ 0.59
SH3RF1-201ENST00000284637 EXOC1Q9NV70 894 aa18.76■□□□□ 0.59
SH3RF1-201ENST00000284637 COPS6Q7L5N1 327 aa18.76■□□□□ 0.59
SH3RF1-201ENST00000284637 KIF14Q15058 1648 aa18.76■□□□□ 0.59
SH3RF1-201ENST00000284637 TUBBP07437 444 aa18.76■□□□□ 0.59
SH3RF1-201ENST00000284637 LMBR1LQ6UX01 489 aa18.76■□□□□ 0.59
SH3RF1-201ENST00000284637 HOOK3Q86VS8 718 aa18.76■□□□□ 0.59
SH3RF1-201ENST00000284637 OTUD6BQ8N6M0 293 aa18.76■□□□□ 0.59
SH3RF1-201ENST00000284637 TESK2Q96S53 571 aa18.76■□□□□ 0.59
SH3RF1-201ENST00000284637 APOBRQ0VD83 1088 aa18.75■□□□□ 0.59
SH3RF1-201ENST00000284637 IFNL2Q8IZJ0 200 aa18.75■□□□□ 0.59
SH3RF1-201ENST00000284637 RMND1Q9NWS8 449 aa18.75■□□□□ 0.59
SH3RF1-201ENST00000284637 ADGRL1O94910 1474 aa18.75■□□□□ 0.59
SH3RF1-201ENST00000284637 DHX58Q96C10 678 aa18.75■□□□□ 0.59
SH3RF1-201ENST00000284637 TMOD2Q9NZR1 351 aa18.75■□□□□ 0.59
SH3RF1-201ENST00000284637 PUF60Q9UHX1 559 aaKnown RBP18.75■□□□□ 0.59
SH3RF1-201ENST00000284637 SNRPA1P09661 255 aaKnown RBP18.75■□□□□ 0.59
SH3RF1-201ENST00000284637 STX17P56962 302 aa18.75■□□□□ 0.59
SH3RF1-201ENST00000284637 CTAGE9A4FU28 777 aa18.75■□□□□ 0.59
SH3RF1-201ENST00000284637 PRC1O43663 620 aa18.74■□□□□ 0.59
SH3RF1-201ENST00000284637 NBPF7P0C2Y1 421 aaPredicted RBP18.74■□□□□ 0.59
SH3RF1-201ENST00000284637 STAT6P42226 847 aa18.74■□□□□ 0.59
SH3RF1-201ENST00000284637 PDE4BQ07343 736 aa18.74■□□□□ 0.59
SH3RF1-201ENST00000284637 RTN1Q16799 776 aa18.74■□□□□ 0.59
SH3RF1-201ENST00000284637 SPECC1LQ69YQ0 1117 aa18.74■□□□□ 0.59
SH3RF1-201ENST00000284637 OTUD7AQ8TE49 926 aaPredicted RBP18.74■□□□□ 0.59
SH3RF1-201ENST00000284637 POLKQ9UBT6 870 aa18.74■□□□□ 0.59
SH3RF1-201ENST00000284637 ZRANB1Q9UGI0 708 aa18.74■□□□□ 0.59
SH3RF1-201ENST00000284637 ZPR1O75312 459 aa18.74■□□□□ 0.59
SH3RF1-201ENST00000284637 SPAG1Q07617 926 aa18.74■□□□□ 0.59
SH3RF1-201ENST00000284637 CEP57Q86XR8 500 aa18.74■□□□□ 0.59
SH3RF1-201ENST00000284637 ATRIPQ8WXE1 791 aa18.74■□□□□ 0.59
SH3RF1-201ENST00000284637 PHACTR3Q96KR7 559 aa18.74■□□□□ 0.59
SH3RF1-201ENST00000284637 STX8Q9UNK0 236 aa18.74■□□□□ 0.59
SH3RF1-201ENST00000284637 NEBLO76041 1014 aa18.74■□□□□ 0.59
SH3RF1-201ENST00000284637 CETN1Q12798 172 aa18.74■□□□□ 0.59
SH3RF1-201ENST00000284637 TSC1Q92574 1164 aa18.74■□□□□ 0.59
SH3RF1-201ENST00000284637 SPAG5Q96R06 1193 aa18.74■□□□□ 0.59
SH3RF1-201ENST00000284637 SLC39A6Q13433 755 aa18.73■□□□□ 0.59
SH3RF1-201ENST00000284637 ZFYP08048 801 aaPredicted RBP18.73■□□□□ 0.59
SH3RF1-201ENST00000284637 C17orf53Q8N3J3 647 aaPredicted RBP18.73■□□□□ 0.59
SH3RF1-201ENST00000284637 HMGXB3Q12766 1538 aa18.73■□□□□ 0.59
SH3RF1-201ENST00000284637 A0A1B0GUA9 196 aa18.73■□□□□ 0.59
SH3RF1-201ENST00000284637 PTPDC1A2A3K4 754 aa18.73■□□□□ 0.59
SH3RF1-201ENST00000284637 MYCBPQ99417 103 aaPredicted RBP18.73■□□□□ 0.59
SH3RF1-201ENST00000284637 CARD14Q9BXL6 1004 aa18.73■□□□□ 0.59
SH3RF1-201ENST00000284637 CTNNA2P26232 953 aa18.73■□□□□ 0.59
SH3RF1-201ENST00000284637 SBNO2Q9Y2G9 1366 aa18.73■□□□□ 0.59
SH3RF1-201ENST00000284637 RHOXF2BP0C7M4 288 aa18.73■□□□□ 0.59
SH3RF1-201ENST00000284637 KSR2Q6VAB6 950 aa18.73■□□□□ 0.59
SH3RF1-201ENST00000284637 CUL5Q93034 780 aa18.73■□□□□ 0.59
SH3RF1-201ENST00000284637 CAPZA3Q96KX2 299 aa18.73■□□□□ 0.59
SH3RF1-201ENST00000284637 RHOXF2Q9BQY4 288 aa18.73■□□□□ 0.59
SH3RF1-201ENST00000284637 MMRN2Q9H8L6 949 aa18.73■□□□□ 0.59
SH3RF1-201ENST00000284637 IQSEC3Q9UPP2 1182 aaPredicted RBP18.73■□□□□ 0.59
SH3RF1-201ENST00000284637 ALDH1L1O75891 902 aa18.72■□□□□ 0.59
SH3RF1-201ENST00000284637 EIF4A2Q14240 407 aaKnown RBP18.72■□□□□ 0.59
SH3RF1-201ENST00000284637 RUFY3Q7L099 469 aa18.72■□□□□ 0.59
SH3RF1-201ENST00000284637 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.72■□□□□ 0.59
SH3RF1-201ENST00000284637 UTP14AQ9BVJ6 771 aaKnown RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms