RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 CSRNP2Q9H175 543 aa4.62□□□□□ -1.67
SCN3A-201ENST00000283254 GRPEL1Q9HAV7 217 aa4.62□□□□□ -1.67
SCN3A-201ENST00000283254 TNRQ92752 1358 aa4.62□□□□□ -1.67
SCN3A-201ENST00000283254 N4BP3O15049 544 aa4.62□□□□□ -1.67
SCN3A-201ENST00000283254 SMTNP53814 917 aa4.62□□□□□ -1.67
SCN3A-201ENST00000283254 MAP7Q14244 749 aa4.62□□□□□ -1.67
SCN3A-201ENST00000283254 ZNF354CQ86Y25 554 aa4.62□□□□□ -1.67
SCN3A-201ENST00000283254 PPP1R2P41236 205 aa4.62□□□□□ -1.67
SCN3A-201ENST00000283254 PRPF4BQ13523 1007 aaKnown RBP4.62□□□□□ -1.67
SCN3A-201ENST00000283254 SMC1BQ8NDV3 1235 aa4.62□□□□□ -1.67
SCN3A-201ENST00000283254 SELENOOQ9BVL4 669 aa4.62□□□□□ -1.67
SCN3A-201ENST00000283254 AMOTL2Q9Y2J4 779 aa4.62□□□□□ -1.67
SCN3A-201ENST00000283254 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.62□□□□□ -1.67
SCN3A-201ENST00000283254 PPIP5K1Q6PFW1 1433 aa4.62□□□□□ -1.67
SCN3A-201ENST00000283254 SOS1Q07889 1333 aaPredicted RBP4.62□□□□□ -1.67
SCN3A-201ENST00000283254 ARHGEF6Q15052 776 aa4.62□□□□□ -1.67
SCN3A-201ENST00000283254 DDB1Q16531 1140 aa4.62□□□□□ -1.67
SCN3A-201ENST00000283254 ATP2B3Q16720 1220 aa4.62□□□□□ -1.67
SCN3A-201ENST00000283254 MAP7D1Q3KQU3 841 aa4.62□□□□□ -1.67
SCN3A-201ENST00000283254 RILPL1Q5EBL4 403 aa4.62□□□□□ -1.67
SCN3A-201ENST00000283254 TTC6Q86TZ1 520 aa4.62□□□□□ -1.67
SCN3A-201ENST00000283254 NUTM1Q86Y26 1132 aa4.62□□□□□ -1.67
SCN3A-201ENST00000283254 FSIP1Q8NA03 581 aa4.62□□□□□ -1.67
SCN3A-201ENST00000283254 CUL7Q14999 1698 aa4.62□□□□□ -1.67
SCN3A-201ENST00000283254 DYNC1I1O14576 645 aa4.62□□□□□ -1.67
SCN3A-201ENST00000283254 CASQ1P31415 396 aa4.62□□□□□ -1.67
SCN3A-201ENST00000283254 MAATS1Q7Z4T9 603 aa4.62□□□□□ -1.67
SCN3A-201ENST00000283254 ORC3Q9UBD5 711 aaPredicted RBP4.62□□□□□ -1.67
SCN3A-201ENST00000283254 KRT79Q5XKE5 535 aa4.62□□□□□ -1.67
SCN3A-201ENST00000283254 ARHGAP45Q92619 1136 aa4.62□□□□□ -1.67
SCN3A-201ENST00000283254 ZBTB3Q9H5J0 574 aa4.62□□□□□ -1.67
SCN3A-201ENST00000283254 JADE2Q9NQC1 790 aa4.62□□□□□ -1.67
SCN3A-201ENST00000283254 ATP6V0A2Q9Y487 856 aa4.62□□□□□ -1.67
SCN3A-201ENST00000283254 A0A1W2PRG0 241 aa4.62□□□□□ -1.67
SCN3A-201ENST00000283254 STK10O94804 968 aaKnown RBP4.62□□□□□ -1.67
SCN3A-201ENST00000283254 BMP2KLQ5H9B9 411 aa4.62□□□□□ -1.67
SCN3A-201ENST00000283254 CTR9Q6PD62 1173 aa4.62□□□□□ -1.67
SCN3A-201ENST00000283254 MCM10Q7L590 875 aa4.62□□□□□ -1.67
SCN3A-201ENST00000283254 TBC1D31Q96DN5 1066 aa4.62□□□□□ -1.67
SCN3A-201ENST00000283254 USP16Q9Y5T5 823 aa4.62□□□□□ -1.67
SCN3A-201ENST00000283254 SCAF11Q99590 1463 aaKnown RBP4.61□□□□□ -1.67
SCN3A-201ENST00000283254 STAT6P42226 847 aa4.61□□□□□ -1.67
SCN3A-201ENST00000283254 TNFAIP1Q13829 316 aa4.61□□□□□ -1.67
SCN3A-201ENST00000283254 AFAP1L2Q8N4X5 818 aa4.61□□□□□ -1.67
SCN3A-201ENST00000283254 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.61□□□□□ -1.67
SCN3A-201ENST00000283254 NAP1L3Q99457 506 aaPredicted RBP4.61□□□□□ -1.67
SCN3A-201ENST00000283254 SRRTQ9BXP5 876 aaKnown RBP4.61□□□□□ -1.67
SCN3A-201ENST00000283254 UHRF1BP1LA0JNW5 1464 aa4.61□□□□□ -1.67
SCN3A-201ENST00000283254 ESPNB1AK53 854 aa4.61□□□□□ -1.67
SCN3A-201ENST00000283254 NAPAP54920 295 aa4.61□□□□□ -1.67
SCN3A-201ENST00000283254 ASIC1P78348 528 aa4.61□□□□□ -1.67
SCN3A-201ENST00000283254 KIF5AQ12840 1032 aa4.61□□□□□ -1.67
SCN3A-201ENST00000283254 CLUL1Q15846 466 aa4.61□□□□□ -1.67
SCN3A-201ENST00000283254 NAA16Q6N069 864 aaPredicted RBP4.61□□□□□ -1.67
SCN3A-201ENST00000283254 HACE1Q8IYU2 909 aa4.61□□□□□ -1.67
SCN3A-201ENST00000283254 RRP36Q96EU6 259 aaKnown RBP4.61□□□□□ -1.67
SCN3A-201ENST00000283254 ZC3H12CQ9C0D7 883 aaKnown RBP4.61□□□□□ -1.67
SCN3A-201ENST00000283254 ZMYND15Q9H091 742 aa4.61□□□□□ -1.67
SCN3A-201ENST00000283254 BOLA2Q9H3K6 86 aa4.61□□□□□ -1.67
SCN3A-201ENST00000283254 CACYBPQ9HB71 228 aaKnown RBP4.61□□□□□ -1.67
SCN3A-201ENST00000283254 CGNQ9P2M7 1197 aaKnown RBP4.61□□□□□ -1.67
SCN3A-201ENST00000283254 ANKRD13DQ6ZTN6 518 aa4.61□□□□□ -1.67
SCN3A-201ENST00000283254 TAOK1Q7L7X3 1001 aa4.61□□□□□ -1.67
SCN3A-201ENST00000283254 PSMD1Q99460 953 aa4.61□□□□□ -1.67
SCN3A-201ENST00000283254 GPHNQ9NQX3 736 aaPredicted RBP4.61□□□□□ -1.67
SCN3A-201ENST00000283254 RAD50Q92878 1312 aa4.61□□□□□ -1.67
SCN3A-201ENST00000283254 TRIM75PA6NK02 468 aa4.61□□□□□ -1.67
SCN3A-201ENST00000283254 HSPA4P34932 840 aa4.61□□□□□ -1.67
SCN3A-201ENST00000283254 BIRC2Q13490 618 aa4.61□□□□□ -1.67
SCN3A-201ENST00000283254 NBPF1Q3BBV0 1214 aa4.61□□□□□ -1.67
SCN3A-201ENST00000283254 PICK1Q9NRD5 415 aa4.61□□□□□ -1.67
SCN3A-201ENST00000283254 STK32BQ9NY57 414 aa4.61□□□□□ -1.67
SCN3A-201ENST00000283254 SWAP70Q9UH65 585 aa4.61□□□□□ -1.67
SCN3A-201ENST00000283254 TOP2BQ02880 1626 aa4.61□□□□□ -1.67
SCN3A-201ENST00000283254 ZBTB43O43298 467 aa4.61□□□□□ -1.67
SCN3A-201ENST00000283254 TACC1O75410 805 aa4.61□□□□□ -1.67
SCN3A-201ENST00000283254 FAM13AO94988 1023 aa4.61□□□□□ -1.67
SCN3A-201ENST00000283254 ZNF830Q96NB3 372 aaPredicted RBP4.61□□□□□ -1.67
SCN3A-201ENST00000283254 NCAPGQ9BPX3 1015 aa4.61□□□□□ -1.67
SCN3A-201ENST00000283254 MTRF1LQ9UGC7 380 aaKnown RBP4.61□□□□□ -1.67
SCN3A-201ENST00000283254 WDR7Q9Y4E6 1490 aa4.61□□□□□ -1.67
SCN3A-201ENST00000283254 PCDH11XQ9BZA7 1347 aa4.61□□□□□ -1.67
SCN3A-201ENST00000283254 PCDH11YQ9BZA8 1340 aa4.61□□□□□ -1.67
SCN3A-201ENST00000283254 BACH1O14867 736 aa4.61□□□□□ -1.67
SCN3A-201ENST00000283254 STX10O60499 249 aa4.61□□□□□ -1.67
SCN3A-201ENST00000283254 RTN1Q16799 776 aa4.61□□□□□ -1.67
SCN3A-201ENST00000283254 TMEM57Q8N5G2 664 aa4.61□□□□□ -1.67
SCN3A-201ENST00000283254 EXOC7Q9UPT5 735 aa4.61□□□□□ -1.67
SCN3A-201ENST00000283254 SYCE3A1L190 88 aa4.61□□□□□ -1.67
SCN3A-201ENST00000283254 KRT86O43790 486 aa4.61□□□□□ -1.67
SCN3A-201ENST00000283254 NOL3O60936 208 aaKnown RBP4.61□□□□□ -1.67
SCN3A-201ENST00000283254 HAUS3Q68CZ6 603 aa4.61□□□□□ -1.67
SCN3A-201ENST00000283254 CCDC125Q86Z20 511 aa4.61□□□□□ -1.67
SCN3A-201ENST00000283254 ARFGAP2Q8N6H7 521 aa4.61□□□□□ -1.67
SCN3A-201ENST00000283254 CNBD1Q8NA66 436 aa4.61□□□□□ -1.67
SCN3A-201ENST00000283254 TIGD1Q96MW7 591 aa4.61□□□□□ -1.67
SCN3A-201ENST00000283254 KRT83P78385 493 aa4.6□□□□□ -1.67
SCN3A-201ENST00000283254 CALCOCO2Q13137 446 aa4.6□□□□□ -1.67
SCN3A-201ENST00000283254 VEZTQ9HBM0 779 aa4.6□□□□□ -1.67
SCN3A-201ENST00000283254 FLT4P35916 1363 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 147.4 ms