RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 POLLQ9UGP5 575 aa15.94■□□□□ 0.14
SS18-202ENST00000269138 FER1L6Q2WGJ9 1857 aa15.94■□□□□ 0.14
SS18-202ENST00000269138 PNMA6EA0A0J9YXQ4 647 aa15.94■□□□□ 0.14
SS18-202ENST00000269138 SRGAP3O43295 1099 aa15.94■□□□□ 0.14
SS18-202ENST00000269138 LMNB1P20700 586 aa15.94■□□□□ 0.14
SS18-202ENST00000269138 PTPN12Q05209 780 aaKnown RBP15.94■□□□□ 0.14
SS18-202ENST00000269138 MTX1Q13505 466 aa15.94■□□□□ 0.14
SS18-202ENST00000269138 GRIPAP1Q4V328 841 aa15.94■□□□□ 0.14
SS18-202ENST00000269138 LRRC24Q50LG9 513 aa15.94■□□□□ 0.14
SS18-202ENST00000269138 HELBQ8NG08 1087 aaPredicted RBP15.94■□□□□ 0.14
SS18-202ENST00000269138 GPR101Q96P66 508 aaPredicted RBP15.94■□□□□ 0.14
SS18-202ENST00000269138 RTFDC1Q9BY42 306 aaPredicted RBP15.94■□□□□ 0.14
SS18-202ENST00000269138 RNF181Q9P0P0 153 aa15.94■□□□□ 0.14
SS18-202ENST00000269138 ANKIB1Q9P2G1 1089 aa15.94■□□□□ 0.14
SS18-202ENST00000269138 PA2G4Q9UQ80 394 aaKnown RBP15.94■□□□□ 0.14
SS18-202ENST00000269138 CHRNDQ07001 517 aa15.93■□□□□ 0.14
SS18-202ENST00000269138 TBC1D16Q8TBP0 767 aa15.93■□□□□ 0.14
SS18-202ENST00000269138 CRBNQ96SW2 442 aa15.93■□□□□ 0.14
SS18-202ENST00000269138 CNNM1Q9NRU3 951 aa15.93■□□□□ 0.14
SS18-202ENST00000269138 LRRC37AA6NMS7 1700 aa15.92■□□□□ 0.14
SS18-202ENST00000269138 C6orf229H3BNL8 230 aa15.92■□□□□ 0.14
SS18-202ENST00000269138 SNAP23O00161 211 aa15.92■□□□□ 0.14
SS18-202ENST00000269138 TAF5LO75529 589 aa15.92■□□□□ 0.14
SS18-202ENST00000269138 ATP8B2P98198 1209 aa15.92■□□□□ 0.14
SS18-202ENST00000269138 PODXL2Q9NZ53 605 aa15.92■□□□□ 0.14
SS18-202ENST00000269138 RIPOR2Q9Y4F9 1068 aa15.92■□□□□ 0.14
SS18-202ENST00000269138 SPEF2Q9C093 1822 aa15.92■□□□□ 0.14
SS18-202ENST00000269138 DUOX1Q9NRD9 1551 aa15.91■□□□□ 0.14
SS18-202ENST00000269138 UFL1O94874 794 aa15.91■□□□□ 0.14
SS18-202ENST00000269138 IARSP41252 1262 aaKnown RBP15.91■□□□□ 0.14
SS18-202ENST00000269138 CEP85Q6P2H3 762 aa15.91■□□□□ 0.14
SS18-202ENST00000269138 SIL1Q9H173 461 aa15.91■□□□□ 0.14
SS18-202ENST00000269138 GGA1Q9UJY5 639 aa15.91■□□□□ 0.14
SS18-202ENST00000269138 XDHP47989 1333 aa15.91■□□□□ 0.14
SS18-202ENST00000269138 AOC3Q16853 763 aa15.9■□□□□ 0.14
SS18-202ENST00000269138 SUPT20HQ8NEM7 779 aa15.9■□□□□ 0.14
SS18-202ENST00000269138 ANKRD2Q9GZV1 360 aa15.9■□□□□ 0.14
SS18-202ENST00000269138 EYA2O00167 538 aa15.89■□□□□ 0.13
SS18-202ENST00000269138 RIMBP2O15034 1052 aa15.89■□□□□ 0.13
SS18-202ENST00000269138 PPIP5K2O43314 1243 aa15.89■□□□□ 0.13
SS18-202ENST00000269138 ATP2B4P23634 1241 aa15.89■□□□□ 0.13
SS18-202ENST00000269138 POLA2Q14181 598 aa15.89■□□□□ 0.13
SS18-202ENST00000269138 ATG9AQ7Z3C6 839 aa15.89■□□□□ 0.13
SS18-202ENST00000269138 SSH3Q8TE77 659 aa15.89■□□□□ 0.13
SS18-202ENST00000269138 COPRSQ9NQ92 184 aa15.89■□□□□ 0.13
SS18-202ENST00000269138 SIRT2Q8IXJ6 389 aa15.89■□□□□ 0.13
SS18-202ENST00000269138 LARGE2Q8N3Y3 721 aa15.89■□□□□ 0.13
SS18-202ENST00000269138 CHMP4BQ9H444 224 aaKnown RBP15.89■□□□□ 0.13
SS18-202ENST00000269138 COL4A5P29400 1685 aa15.88■□□□□ 0.13
SS18-202ENST00000269138 SBF1O95248 1867 aa15.88■□□□□ 0.13
SS18-202ENST00000269138 LTBP1Q14766 1721 aa15.88■□□□□ 0.13
SS18-202ENST00000269138 KLRK1P26718 216 aa15.88■□□□□ 0.13
SS18-202ENST00000269138 IRX6P78412 446 aaPredicted RBP15.88■□□□□ 0.13
SS18-202ENST00000269138 KIAA2012Q0VF49 1180 aa15.88■□□□□ 0.13
SS18-202ENST00000269138 WASHC4Q2M389 1173 aa15.88■□□□□ 0.13
SS18-202ENST00000269138 METTL24Q5JXM2 366 aa15.88■□□□□ 0.13
SS18-202ENST00000269138 LEMD3Q9Y2U8 911 aa15.88■□□□□ 0.13
SS18-202ENST00000269138 ZNF804BA4D1E1 1349 aa15.87■□□□□ 0.13
SS18-202ENST00000269138 TXNRD3Q86VQ6 643 aa15.87■□□□□ 0.13
SS18-202ENST00000269138 VGLL2Q8N8G2 317 aa15.87■□□□□ 0.13
SS18-202ENST00000269138 MROH5Q6ZUA9 1318 aa15.87■□□□□ 0.13
SS18-202ENST00000269138 CIAO1O76071 339 aa15.86■□□□□ 0.13
SS18-202ENST00000269138 YY1P25490 414 aa15.86■□□□□ 0.13
SS18-202ENST00000269138 KCNJ4P48050 445 aa15.86■□□□□ 0.13
SS18-202ENST00000269138 DOK7Q18PE1 504 aa15.86■□□□□ 0.13
SS18-202ENST00000269138 EXOC6Q8TAG9 804 aa15.86■□□□□ 0.13
SS18-202ENST00000269138 EYA3Q99504 573 aa15.86■□□□□ 0.13
SS18-202ENST00000269138 ZC3H12CQ9C0D7 883 aaKnown RBP15.86■□□□□ 0.13
SS18-202ENST00000269138 VPS33BQ9H267 617 aa15.86■□□□□ 0.13
SS18-202ENST00000269138 CCDC88AQ3V6T2 1871 aa15.86■□□□□ 0.13
SS18-202ENST00000269138 RPAP2Q8IXW5 612 aaPredicted RBP15.85■□□□□ 0.13
SS18-202ENST00000269138 FBXO3Q9UK99 471 aa15.85■□□□□ 0.13
SS18-202ENST00000269138 CHD4Q14839 1912 aa15.85■□□□□ 0.13
SS18-202ENST00000269138 PDE8BO95263 885 aa15.84■□□□□ 0.13
SS18-202ENST00000269138 IL15P40933 162 aaPredicted RBP15.84■□□□□ 0.13
SS18-202ENST00000269138 NIM1KQ8IY84 436 aa15.84■□□□□ 0.13
SS18-202ENST00000269138 JDP2Q8WYK2 163 aa15.84■□□□□ 0.13
SS18-202ENST00000269138 DBNDD1Q9H9R9 158 aa15.84■□□□□ 0.13
SS18-202ENST00000269138 PCDHB15Q9Y5E8 787 aa15.84■□□□□ 0.13
SS18-202ENST00000269138 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.84■□□□□ 0.13
SS18-202ENST00000269138 IRS2Q9Y4H2 1338 aa15.84■□□□□ 0.13
SS18-202ENST00000269138 YDJCA8MPS7 323 aa15.84■□□□□ 0.13
SS18-202ENST00000269138 FZD9O00144 591 aa15.84■□□□□ 0.13
SS18-202ENST00000269138 SURF6O75683 361 aaKnown RBP15.84■□□□□ 0.13
SS18-202ENST00000269138 G3BP1Q13283 466 aaKnown RBP eCLIP15.84■□□□□ 0.13
SS18-202ENST00000269138 CEP126Q9P2H0 1117 aa15.84■□□□□ 0.13
SS18-202ENST00000269138 ZNF541Q9H0D2 1346 aa15.83■□□□□ 0.13
SS18-202ENST00000269138 MED23Q9ULK4 1368 aa15.83■□□□□ 0.12
SS18-202ENST00000269138 TFCP2Q12800 502 aa15.83■□□□□ 0.12
SS18-202ENST00000269138 UBE4AQ14139 1066 aa15.83■□□□□ 0.12
SS18-202ENST00000269138 KCNQ5Q9NR82 932 aa15.83■□□□□ 0.12
SS18-202ENST00000269138 ZNRF3Q9ULT6 936 aa15.83■□□□□ 0.12
SS18-202ENST00000269138 NOP58Q9Y2X3 529 aaKnown RBP15.83■□□□□ 0.12
SS18-202ENST00000269138 ECE2O60344 883 aa15.82■□□□□ 0.12
SS18-202ENST00000269138 SASH1O94885 1247 aa15.82■□□□□ 0.12
SS18-202ENST00000269138 FGFR2P21802 821 aa15.82■□□□□ 0.12
SS18-202ENST00000269138 ZNF526Q8TF50 670 aaPredicted RBP15.82■□□□□ 0.12
SS18-202ENST00000269138 EXOC6BQ9Y2D4 811 aa15.82■□□□□ 0.12
SS18-202ENST00000269138 A0A1B0GUL6 1792 aa15.81■□□□□ 0.12
SS18-202ENST00000269138 G3V3G9 751 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms