RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 ZNF790Q6PG37 636 aa19.93■□□□□ 0.78
RTN1-201ENST00000267484 CHST3Q7LGC8 479 aa19.93■□□□□ 0.78
RTN1-201ENST00000267484 PTPN12Q05209 780 aaKnown RBP19.93■□□□□ 0.78
RTN1-201ENST00000267484 NCOA5Q9HCD5 579 aaKnown RBP19.93■□□□□ 0.78
RTN1-201ENST00000267484 LMO7Q8WWI1 1683 aa19.92■□□□□ 0.78
RTN1-201ENST00000267484 RBM43Q6ZSC3 357 aaKnown RBP19.92■□□□□ 0.78
RTN1-201ENST00000267484 TDRD7Q8NHU6 1098 aaKnown RBP19.92■□□□□ 0.78
RTN1-201ENST00000267484 APOBRQ0VD83 1088 aa19.92■□□□□ 0.78
RTN1-201ENST00000267484 ZNF592Q92610 1267 aa19.92■□□□□ 0.78
RTN1-201ENST00000267484 ZNF496Q96IT1 587 aaPredicted RBP19.92■□□□□ 0.78
RTN1-201ENST00000267484 USPL1Q5W0Q7 1092 aa19.91■□□□□ 0.78
RTN1-201ENST00000267484 GOLPH3LQ9H4A5 285 aa19.91■□□□□ 0.78
RTN1-201ENST00000267484 TNNT1P13805 278 aa19.91■□□□□ 0.78
RTN1-201ENST00000267484 ZSCAN20P17040 1043 aaPredicted RBP19.91■□□□□ 0.78
RTN1-201ENST00000267484 ATP5JP18859 108 aa19.91■□□□□ 0.78
RTN1-201ENST00000267484 IGSF3O75054 1194 aa19.9■□□□□ 0.78
RTN1-201ENST00000267484 TSGA10IPQ3SY00 556 aa19.9■□□□□ 0.78
RTN1-201ENST00000267484 RFX5P48382 616 aaPredicted RBP19.9■□□□□ 0.78
RTN1-201ENST00000267484 METTL22Q9BUU2 404 aaPredicted RBP19.9■□□□□ 0.78
RTN1-201ENST00000267484 ALDH8A1Q9H2A2 487 aaPredicted RBP19.9■□□□□ 0.78
RTN1-201ENST00000267484 ANKRD13DQ6ZTN6 518 aa19.9■□□□□ 0.78
RTN1-201ENST00000267484 CHD2O14647 1828 aaKnown RBP19.9■□□□□ 0.78
RTN1-201ENST00000267484 CCAR1Q8IX12 1150 aaKnown RBP19.89■□□□□ 0.78
RTN1-201ENST00000267484 USP27XA6NNY8 438 aa19.89■□□□□ 0.77
RTN1-201ENST00000267484 NEUROD6Q96NK8 337 aa19.89■□□□□ 0.77
RTN1-201ENST00000267484 JCADQ9P266 1359 aa19.89■□□□□ 0.77
RTN1-201ENST00000267484 CTDNEP1O95476 244 aa19.89■□□□□ 0.77
RTN1-201ENST00000267484 ADD1P35611 737 aaKnown RBP19.89■□□□□ 0.77
RTN1-201ENST00000267484 KRT32Q14532 448 aa19.89■□□□□ 0.77
RTN1-201ENST00000267484 TPD52L1Q16890 204 aaPredicted RBP19.89■□□□□ 0.77
RTN1-201ENST00000267484 MCMDC2Q4G0Z9 681 aa19.88■□□□□ 0.77
RTN1-201ENST00000267484 USP28Q96RU2 1077 aa19.88■□□□□ 0.77
RTN1-201ENST00000267484 GOLIM4O00461 696 aa19.88■□□□□ 0.77
RTN1-201ENST00000267484 NCBP1Q09161 790 aaKnown RBP19.88■□□□□ 0.77
RTN1-201ENST00000267484 COPRSQ9NQ92 184 aa19.88■□□□□ 0.77
RTN1-201ENST00000267484 NLRP2Q9NX02 1062 aa19.88■□□□□ 0.77
RTN1-201ENST00000267484 USP54Q70EL1 1684 aa19.88■□□□□ 0.77
RTN1-201ENST00000267484 A0A087WZG4 1122 aa19.88■□□□□ 0.77
RTN1-201ENST00000267484 FILIP1Q7Z7B0 1213 aa19.88■□□□□ 0.77
RTN1-201ENST00000267484 NSUN7Q8NE18 718 aaKnown RBP19.88■□□□□ 0.77
RTN1-201ENST00000267484 ANKRD7Q92527 254 aa19.88■□□□□ 0.77
RTN1-201ENST00000267484 GOLGA6L19H0YKK7 550 aa19.87■□□□□ 0.77
RTN1-201ENST00000267484 CTIFO43310 598 aaKnown RBP19.87■□□□□ 0.77
RTN1-201ENST00000267484 IQCB1Q15051 598 aa19.87■□□□□ 0.77
RTN1-201ENST00000267484 U3KPZ7 1027 aaPredicted RBP19.87■□□□□ 0.77
RTN1-201ENST00000267484 PTPDC1A2A3K4 754 aa19.87■□□□□ 0.77
RTN1-201ENST00000267484 TIMM10P62072 90 aa19.87■□□□□ 0.77
RTN1-201ENST00000267484 PDIA4P13667 645 aaKnown RBP19.86■□□□□ 0.77
RTN1-201ENST00000267484 SLC52A2Q9HAB3 445 aa19.86■□□□□ 0.77
RTN1-201ENST00000267484 CFAP45Q9UL16 551 aa19.86■□□□□ 0.77
RTN1-201ENST00000267484 TAOK2Q9UL54 1235 aa19.86■□□□□ 0.77
RTN1-201ENST00000267484 OTUD7BQ6GQQ9 843 aa19.86■□□□□ 0.77
RTN1-201ENST00000267484 LMBR1LQ6UX01 489 aa19.86■□□□□ 0.77
RTN1-201ENST00000267484 GPHNQ9NQX3 736 aaPredicted RBP19.86■□□□□ 0.77
RTN1-201ENST00000267484 NCAPD2Q15021 1401 aa19.85■□□□□ 0.77
RTN1-201ENST00000267484 TRMT1Q9NXH9 659 aaKnown RBP19.85■□□□□ 0.77
RTN1-201ENST00000267484 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.85■□□□□ 0.77
RTN1-201ENST00000267484 V9GYY5 206 aaPredicted RBP19.85■□□□□ 0.77
RTN1-201ENST00000267484 ADGRL3Q9HAR2 1447 aa19.85■□□□□ 0.77
RTN1-201ENST00000267484 KLHL34Q8N239 644 aa19.85■□□□□ 0.77
RTN1-201ENST00000267484 HAUS7Q99871 368 aa19.85■□□□□ 0.77
RTN1-201ENST00000267484 TTLL5Q6EMB2 1281 aa19.84■□□□□ 0.77
RTN1-201ENST00000267484 RAB11FIP4Q86YS3 637 aa19.84■□□□□ 0.77
RTN1-201ENST00000267484 ZSCAN16Q9H4T2 348 aaPredicted RBP19.84■□□□□ 0.77
RTN1-201ENST00000267484 ME1P48163 572 aa19.84■□□□□ 0.77
RTN1-201ENST00000267484 SNW1Q13573 536 aaKnown RBP19.84■□□□□ 0.77
RTN1-201ENST00000267484 SMARCC2Q8TAQ2 1214 aa19.84■□□□□ 0.77
RTN1-201ENST00000267484 RAPGEF4Q8WZA2 1011 aa19.84■□□□□ 0.77
RTN1-201ENST00000267484 BECN2A8MW95 431 aa19.83■□□□□ 0.77
RTN1-201ENST00000267484 PFKFB2O60825 505 aa19.83■□□□□ 0.77
RTN1-201ENST00000267484 DMTNQ08495 405 aa19.83■□□□□ 0.77
RTN1-201ENST00000267484 DHX32Q7L7V1 743 aaKnown RBP19.83■□□□□ 0.77
RTN1-201ENST00000267484 LRRC8AQ8IWT6 810 aa19.83■□□□□ 0.77
RTN1-201ENST00000267484 LRP10Q7Z4F1 713 aa19.83■□□□□ 0.76
RTN1-201ENST00000267484 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.83■□□□□ 0.76
RTN1-201ENST00000267484 KDM6AO15550 1401 aaPredicted RBP19.82■□□□□ 0.76
RTN1-201ENST00000267484 ILDR1Q86SU0 546 aaPredicted RBP19.82■□□□□ 0.76
RTN1-201ENST00000267484 FSIP1Q8NA03 581 aa19.82■□□□□ 0.76
RTN1-201ENST00000267484 KBTBD3Q8NAB2 608 aa19.82■□□□□ 0.76
RTN1-201ENST00000267484 SMTNL1A8MU46 457 aa19.82■□□□□ 0.76
RTN1-201ENST00000267484 ZNF594Q96JF6 807 aaPredicted RBP19.82■□□□□ 0.76
RTN1-201ENST00000267484 CCDC73Q6ZRK6 1079 aa19.82■□□□□ 0.76
RTN1-201ENST00000267484 CCDC112Q8NEF3 446 aa19.82■□□□□ 0.76
RTN1-201ENST00000267484 GJB4Q9NTQ9 266 aa19.82■□□□□ 0.76
RTN1-201ENST00000267484 RCOR1Q9UKL0 485 aa19.82■□□□□ 0.76
RTN1-201ENST00000267484 STX1AQ16623 288 aa19.81■□□□□ 0.76
RTN1-201ENST00000267484 DHX40Q8IX18 779 aaKnown RBP19.81■□□□□ 0.76
RTN1-201ENST00000267484 AOPEPQ8N6M6 819 aa19.81■□□□□ 0.76
RTN1-201ENST00000267484 DDX17Q92841 729 aaKnown RBP19.81■□□□□ 0.76
RTN1-201ENST00000267484 SYTL4Q96C24 671 aaPredicted RBP19.81■□□□□ 0.76
RTN1-201ENST00000267484 ERBB3P21860 1342 aa19.81■□□□□ 0.76
RTN1-201ENST00000267484 A0A1B0GVL5 298 aa19.81■□□□□ 0.76
RTN1-201ENST00000267484 KINO60870 393 aaKnown RBP19.81■□□□□ 0.76
RTN1-201ENST00000267484 SKILP12757 684 aa19.81■□□□□ 0.76
RTN1-201ENST00000267484 C5P01031 1676 aa19.81■□□□□ 0.76
RTN1-201ENST00000267484 PHKG2P15735 406 aa19.8■□□□□ 0.76
RTN1-201ENST00000267484 CEP135Q66GS9 1140 aa19.8■□□□□ 0.76
RTN1-201ENST00000267484 TTC5Q8N0Z6 440 aa19.8■□□□□ 0.76
RTN1-201ENST00000267484 PAG1Q9NWQ8 432 aa19.8■□□□□ 0.76
RTN1-201ENST00000267484 E7EWF7 191 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms