RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 ATP2B3Q16720 1220 aa15.84■□□□□ 0.13
VAMP7-201ENST00000262640 PDE8BO95263 885 aa15.84■□□□□ 0.13
VAMP7-201ENST00000262640 BAG6P46379 1132 aa15.84■□□□□ 0.13
VAMP7-201ENST00000262640 ANKRD18AQ8IVF6 992 aa15.84■□□□□ 0.13
VAMP7-201ENST00000262640 NLGN1Q8N2Q7 840 aa15.84■□□□□ 0.13
VAMP7-201ENST00000262640 C22orf23Q9BZE7 217 aa15.84■□□□□ 0.13
VAMP7-201ENST00000262640 BOLA2Q9H3K6 86 aa15.84■□□□□ 0.13
VAMP7-201ENST00000262640 SERPINB2P05120 415 aa15.83■□□□□ 0.12
VAMP7-201ENST00000262640 PRR5LQ6MZQ0 368 aa15.83■□□□□ 0.12
VAMP7-201ENST00000262640 MSH5O43196 834 aa15.83■□□□□ 0.12
VAMP7-201ENST00000262640 ST5P78524 1137 aa15.83■□□□□ 0.12
VAMP7-201ENST00000262640 PNPLA7Q6ZV29 1317 aa15.82■□□□□ 0.12
VAMP7-201ENST00000262640 PUM3Q15397 648 aaKnown RBP15.82■□□□□ 0.12
VAMP7-201ENST00000262640 GORABQ5T7V8 394 aa15.82■□□□□ 0.12
VAMP7-201ENST00000262640 XAGE2Q96GT9 111 aa15.82■□□□□ 0.12
VAMP7-201ENST00000262640 POLRMTO00411 1230 aaKnown RBP15.82■□□□□ 0.12
VAMP7-201ENST00000262640 REC8O95072 547 aa15.82■□□□□ 0.12
VAMP7-201ENST00000262640 CCDC158Q5M9N0 1113 aa15.82■□□□□ 0.12
VAMP7-201ENST00000262640 CCDC24Q8N4L8 307 aa15.82■□□□□ 0.12
VAMP7-201ENST00000262640 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.82■□□□□ 0.12
VAMP7-201ENST00000262640 HAUS7Q99871 368 aa15.82■□□□□ 0.12
VAMP7-201ENST00000262640 ESYT1Q9BSJ8 1104 aa15.82■□□□□ 0.12
VAMP7-201ENST00000262640 BSDC1Q9NW68 430 aaPredicted RBP15.82■□□□□ 0.12
VAMP7-201ENST00000262640 STK32BQ9NY57 414 aa15.82■□□□□ 0.12
VAMP7-201ENST00000262640 DDR1Q08345 913 aa15.81■□□□□ 0.12
VAMP7-201ENST00000262640 SLC15A2Q16348 729 aa15.8■□□□□ 0.12
VAMP7-201ENST00000262640 DDX46Q7L014 1031 aaKnown RBP15.8■□□□□ 0.12
VAMP7-201ENST00000262640 LPIN2Q92539 896 aa15.8■□□□□ 0.12
VAMP7-201ENST00000262640 CASZ1Q86V15 1759 aa15.8■□□□□ 0.12
VAMP7-201ENST00000262640 HIP1O00291 1037 aa15.8■□□□□ 0.12
VAMP7-201ENST00000262640 FGFR2P21802 821 aa15.8■□□□□ 0.12
VAMP7-201ENST00000262640 ADORA1P30542 326 aa15.8■□□□□ 0.12
VAMP7-201ENST00000262640 RBM25P49756 843 aaKnown RBP15.8■□□□□ 0.12
VAMP7-201ENST00000262640 DDRGK1Q96HY6 314 aa15.8■□□□□ 0.12
VAMP7-201ENST00000262640 TNRC6CQ9HCJ0 1690 aaKnown RBP15.8■□□□□ 0.12
VAMP7-201ENST00000262640 AK9Q5TCS8 1911 aa15.8■□□□□ 0.12
VAMP7-201ENST00000262640 TTC39AQ5SRH9 613 aa15.79■□□□□ 0.12
VAMP7-201ENST00000262640 ANO8Q9HCE9 1232 aaPredicted RBP15.79■□□□□ 0.12
VAMP7-201ENST00000262640 SLC5A1P13866 664 aa15.79■□□□□ 0.12
VAMP7-201ENST00000262640 RPS8P62241 208 aaKnown RBP15.79■□□□□ 0.12
VAMP7-201ENST00000262640 CHRNDQ07001 517 aa15.79■□□□□ 0.12
VAMP7-201ENST00000262640 HELBQ8NG08 1087 aaPredicted RBP15.79■□□□□ 0.12
VAMP7-201ENST00000262640 CELF1Q92879 486 aaKnown RBP15.79■□□□□ 0.12
VAMP7-201ENST00000262640 DIAPH3Q9NSV4 1193 aa15.79■□□□□ 0.12
VAMP7-201ENST00000262640 IFIT1P09914 478 aaKnown RBP15.78■□□□□ 0.12
VAMP7-201ENST00000262640 RUFY2Q8WXA3 655 aa15.78■□□□□ 0.12
VAMP7-201ENST00000262640 IPO9Q96P70 1041 aaKnown RBP15.78■□□□□ 0.12
VAMP7-201ENST00000262640 DNAJC2Q99543 621 aaKnown RBP15.78■□□□□ 0.12
VAMP7-201ENST00000262640 FSD1Q9BTV5 496 aa15.78■□□□□ 0.12
VAMP7-201ENST00000262640 COL4A1P02462 1669 aa15.78■□□□□ 0.12
VAMP7-201ENST00000262640 RFX7Q2KHR2 1363 aa15.78■□□□□ 0.12
VAMP7-201ENST00000262640 TICAM2Q86XR7 235 aa15.78■□□□□ 0.12
VAMP7-201ENST00000262640 ZNF512BQ96KM6 892 aaPredicted RBP15.78■□□□□ 0.12
VAMP7-201ENST00000262640 SPEF2Q9C093 1822 aa15.78■□□□□ 0.12
VAMP7-201ENST00000262640 CCDC125Q86Z20 511 aa15.77■□□□□ 0.12
VAMP7-201ENST00000262640 USP26Q9BXU7 913 aa15.77■□□□□ 0.12
VAMP7-201ENST00000262640 CRY2Q49AN0 593 aa15.77■□□□□ 0.11
VAMP7-201ENST00000262640 ILDR1Q86SU0 546 aaPredicted RBP15.77■□□□□ 0.11
VAMP7-201ENST00000262640 PAG1Q9NWQ8 432 aa15.77■□□□□ 0.11
VAMP7-201ENST00000262640 QSER1Q2KHR3 1735 aa15.77■□□□□ 0.11
VAMP7-201ENST00000262640 SGSM2O43147 1006 aa15.76■□□□□ 0.11
VAMP7-201ENST00000262640 EPB41L2O43491 1005 aaKnown RBP15.76■□□□□ 0.11
VAMP7-201ENST00000262640 TAF5LO75529 589 aa15.76■□□□□ 0.11
VAMP7-201ENST00000262640 DEFB132Q7Z7B7 95 aa15.76■□□□□ 0.11
VAMP7-201ENST00000262640 ARAP2Q8WZ64 1704 aa15.76■□□□□ 0.11
VAMP7-201ENST00000262640 RPGRQ92834 1020 aaKnown RBP15.76■□□□□ 0.11
VAMP7-201ENST00000262640 MINPP1Q9UNW1 487 aa15.76■□□□□ 0.11
VAMP7-201ENST00000262640 GRAPQ13588 217 aa15.76■□□□□ 0.11
VAMP7-201ENST00000262640 GRAPLQ8TC17 118 aaPredicted RBP15.76■□□□□ 0.11
VAMP7-201ENST00000262640 PARP3Q9Y6F1 533 aa15.76■□□□□ 0.11
VAMP7-201ENST00000262640 UQCRFS1P1P0C7P4 283 aa15.75■□□□□ 0.11
VAMP7-201ENST00000262640 KBTBD3Q8NAB2 608 aa15.75■□□□□ 0.11
VAMP7-201ENST00000262640 EDC3Q96F86 508 aaKnown RBP15.75■□□□□ 0.11
VAMP7-201ENST00000262640 ANKRD2Q9GZV1 360 aa15.75■□□□□ 0.11
VAMP7-201ENST00000262640 NRXN2Q9P2S2 1712 aa15.75■□□□□ 0.11
VAMP7-201ENST00000262640 KLRG2A4D1S0 409 aaPredicted RBP15.75■□□□□ 0.11
VAMP7-201ENST00000262640 MMP10P09238 476 aa15.75■□□□□ 0.11
VAMP7-201ENST00000262640 UBE4AQ14139 1066 aa15.75■□□□□ 0.11
VAMP7-201ENST00000262640 CWC27Q6UX04 472 aaKnown RBP15.75■□□□□ 0.11
VAMP7-201ENST00000262640 RBM17Q96I25 401 aaKnown RBP15.75■□□□□ 0.11
VAMP7-201ENST00000262640 RAD50Q92878 1312 aa15.74■□□□□ 0.11
VAMP7-201ENST00000262640 GOLIM4O00461 696 aa15.74■□□□□ 0.11
VAMP7-201ENST00000262640 ARID4AP29374 1257 aaPredicted RBP15.74■□□□□ 0.11
VAMP7-201ENST00000262640 CCDC102BQ68D86 513 aa15.74■□□□□ 0.11
VAMP7-201ENST00000262640 NDUFB9Q9Y6M9 179 aa15.74■□□□□ 0.11
VAMP7-201ENST00000262640 BRIP1Q9BX63 1249 aa15.74■□□□□ 0.11
VAMP7-201ENST00000262640 ANO2Q9NQ90 1003 aa15.74■□□□□ 0.11
VAMP7-201ENST00000262640 HOXA10P31260 410 aaPredicted RBP15.73■□□□□ 0.11
VAMP7-201ENST00000262640 PHKA1P46020 1223 aa15.73■□□□□ 0.11
VAMP7-201ENST00000262640 NMIQ13287 307 aaPredicted RBP15.73■□□□□ 0.11
VAMP7-201ENST00000262640 MSL1Q68DK7 614 aa15.73■□□□□ 0.11
VAMP7-201ENST00000262640 IL25Q9H293 177 aa15.73■□□□□ 0.11
VAMP7-201ENST00000262640 TAF1P21675 1872 aa15.73■□□□□ 0.11
VAMP7-201ENST00000262640 A0A1B0GUL6 1792 aa15.72■□□□□ 0.11
VAMP7-201ENST00000262640 FKBP4Q02790 459 aaKnown RBP eCLIP15.72■□□□□ 0.11
VAMP7-201ENST00000262640 SCARF1Q14162 830 aa15.72■□□□□ 0.11
VAMP7-201ENST00000262640 KIAA1211Q6ZU35 1233 aa15.72■□□□□ 0.11
VAMP7-201ENST00000262640 SNAP23O00161 211 aa15.72■□□□□ 0.11
VAMP7-201ENST00000262640 MCCP23508 829 aa15.72■□□□□ 0.11
VAMP7-201ENST00000262640 MCAMP43121 646 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms