RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 RTFDC1Q9BY42 306 aaPredicted RBP23.42■■□□□ 1.34
CYSTM1-201ENST00000261811 ZNF277Q9NRM2 450 aaPredicted RBP23.42■■□□□ 1.34
CYSTM1-201ENST00000261811 CNNM1Q9NRU3 951 aa23.42■■□□□ 1.34
CYSTM1-201ENST00000261811 DDX19BQ9UMR2 479 aa23.42■■□□□ 1.34
CYSTM1-201ENST00000261811 SNED1Q8TER0 1413 aa23.42■■□□□ 1.34
CYSTM1-201ENST00000261811 XDHP47989 1333 aa23.42■■□□□ 1.34
CYSTM1-201ENST00000261811 C6orf229H3BNL8 230 aa23.41■■□□□ 1.34
CYSTM1-201ENST00000261811 RLBP1P12271 317 aa23.41■■□□□ 1.34
CYSTM1-201ENST00000261811 PODXL2Q9NZ53 605 aa23.41■■□□□ 1.34
CYSTM1-201ENST00000261811 A0A1B0GUL6 1792 aa23.41■■□□□ 1.34
CYSTM1-201ENST00000261811 LTBP1Q14766 1721 aa23.41■■□□□ 1.34
CYSTM1-201ENST00000261811 GPSM2P81274 684 aa23.4■■□□□ 1.34
CYSTM1-201ENST00000261811 MVPQ14764 893 aaKnown RBP23.4■■□□□ 1.34
CYSTM1-201ENST00000261811 LARGE2Q8N3Y3 721 aa23.4■■□□□ 1.34
CYSTM1-201ENST00000261811 GGA1Q9UJY5 639 aa23.4■■□□□ 1.34
CYSTM1-201ENST00000261811 MINPP1Q9UNW1 487 aa23.4■■□□□ 1.34
CYSTM1-201ENST00000261811 PPIP5K2O43314 1243 aa23.39■■□□□ 1.34
CYSTM1-201ENST00000261811 ATP2B4P23634 1241 aa23.39■■□□□ 1.34
CYSTM1-201ENST00000261811 ZBTB7BO15156 539 aaPredicted RBP23.38■■□□□ 1.33
CYSTM1-201ENST00000261811 WASHC4Q2M389 1173 aa23.38■■□□□ 1.33
CYSTM1-201ENST00000261811 DPY19L2Q6NUT2 758 aa23.38■■□□□ 1.33
CYSTM1-201ENST00000261811 UFL1O94874 794 aa23.37■■□□□ 1.33
CYSTM1-201ENST00000261811 KCNJ4P48050 445 aa23.37■■□□□ 1.33
CYSTM1-201ENST00000261811 ZNF594Q96JF6 807 aaPredicted RBP23.37■■□□□ 1.33
CYSTM1-201ENST00000261811 ZC3H12CQ9C0D7 883 aaKnown RBP23.37■■□□□ 1.33
CYSTM1-201ENST00000261811 LEMD3Q9Y2U8 911 aa23.37■■□□□ 1.33
CYSTM1-201ENST00000261811 COG6Q9Y2V7 657 aa23.37■■□□□ 1.33
CYSTM1-201ENST00000261811 G3V3G9 751 aa23.36■■□□□ 1.33
CYSTM1-201ENST00000261811 DCAF8Q5TAQ9 597 aa23.36■■□□□ 1.33
CYSTM1-201ENST00000261811 NIM1KQ8IY84 436 aa23.36■■□□□ 1.33
CYSTM1-201ENST00000261811 TBC1D16Q8TBP0 767 aa23.36■■□□□ 1.33
CYSTM1-201ENST00000261811 FBXO3Q9UK99 471 aa23.36■■□□□ 1.33
CYSTM1-201ENST00000261811 MROH5Q6ZUA9 1318 aa23.36■■□□□ 1.33
CYSTM1-201ENST00000261811 PRELPP51888 382 aa23.35■■□□□ 1.33
CYSTM1-201ENST00000261811 RRP1P56182 461 aaKnown RBP23.35■■□□□ 1.33
CYSTM1-201ENST00000261811 CHRNDQ07001 517 aa23.35■■□□□ 1.33
CYSTM1-201ENST00000261811 KIAA2012Q0VF49 1180 aa23.35■■□□□ 1.33
CYSTM1-201ENST00000261811 AOC3Q16853 763 aa23.35■■□□□ 1.33
CYSTM1-201ENST00000261811 DUOX1Q9NRD9 1551 aa23.35■■□□□ 1.33
CYSTM1-201ENST00000261811 KDM2BQ8NHM5 1336 aa23.35■■□□□ 1.33
CYSTM1-201ENST00000261811 SRGAP3O43295 1099 aa23.34■■□□□ 1.33
CYSTM1-201ENST00000261811 MTX1Q13505 466 aa23.34■■□□□ 1.33
CYSTM1-201ENST00000261811 POLLQ9UGP5 575 aa23.34■■□□□ 1.33
CYSTM1-201ENST00000261811 EIF6P56537 245 aaKnown RBP23.33■■□□□ 1.33
CYSTM1-201ENST00000261811 SLC51AQ86UW1 340 aa23.33■■□□□ 1.33
CYSTM1-201ENST00000261811 RIMBP2O15034 1052 aa23.32■■□□□ 1.32
CYSTM1-201ENST00000261811 ZNF804BA4D1E1 1349 aa23.32■■□□□ 1.32
CYSTM1-201ENST00000261811 EYA2O00167 538 aa23.31■■□□□ 1.32
CYSTM1-201ENST00000261811 RFX5P48382 616 aaPredicted RBP23.31■■□□□ 1.32
CYSTM1-201ENST00000261811 PTPN12Q05209 780 aaKnown RBP23.31■■□□□ 1.32
CYSTM1-201ENST00000261811 METTL24Q5JXM2 366 aa23.31■■□□□ 1.32
CYSTM1-201ENST00000261811 ZNRF3Q9ULT6 936 aa23.31■■□□□ 1.32
CYSTM1-201ENST00000261811 RIPOR2Q9Y4F9 1068 aa23.31■■□□□ 1.32
CYSTM1-201ENST00000261811 MED23Q9ULK4 1368 aa23.3■■□□□ 1.32
CYSTM1-201ENST00000261811 GLTPD2A6NH11 291 aa23.3■■□□□ 1.32
CYSTM1-201ENST00000261811 FZD9O00144 591 aa23.3■■□□□ 1.32
CYSTM1-201ENST00000261811 CIAO1O76071 339 aa23.3■■□□□ 1.32
CYSTM1-201ENST00000261811 GPBP1L1Q9HC44 474 aaPredicted RBP23.3■■□□□ 1.32
CYSTM1-201ENST00000261811 COPRSQ9NQ92 184 aa23.3■■□□□ 1.32
CYSTM1-201ENST00000261811 TAF5LO75529 589 aa23.29■■□□□ 1.32
CYSTM1-201ENST00000261811 ATP8B2P98198 1209 aa23.29■■□□□ 1.32
CYSTM1-201ENST00000261811 C20orf194Q5TEA3 1177 aa23.29■■□□□ 1.32
CYSTM1-201ENST00000261811 HELBQ8NG08 1087 aaPredicted RBP23.29■■□□□ 1.32
CYSTM1-201ENST00000261811 KLHDC4Q8TBB5 520 aa23.29■■□□□ 1.32
CYSTM1-201ENST00000261811 PUS3Q9BZE2 481 aaKnown RBP23.29■■□□□ 1.32
CYSTM1-201ENST00000261811 C1orf115Q9H7X2 142 aa23.29■■□□□ 1.32
CYSTM1-201ENST00000261811 IL15P40933 162 aaPredicted RBP23.28■■□□□ 1.32
CYSTM1-201ENST00000261811 UBE4AQ14139 1066 aa23.28■■□□□ 1.32
CYSTM1-201ENST00000261811 LRRC24Q50LG9 513 aa23.28■■□□□ 1.32
CYSTM1-201ENST00000261811 SIL1Q9H173 461 aa23.28■■□□□ 1.32
CYSTM1-201ENST00000261811 SCN4AP35499 1836 aa23.27■■□□□ 1.32
CYSTM1-201ENST00000261811 PSME4Q14997 1843 aa23.27■■□□□ 1.32
CYSTM1-201ENST00000261811 TNIP1Q15025 636 aa23.27■■□□□ 1.32
CYSTM1-201ENST00000261811 RPAP2Q8IXW5 612 aaPredicted RBP23.27■■□□□ 1.32
CYSTM1-201ENST00000261811 ZNF784Q8NCA9 323 aaPredicted RBP23.27■■□□□ 1.32
CYSTM1-201ENST00000261811 ZNF526Q8TF50 670 aaPredicted RBP23.27■■□□□ 1.32
CYSTM1-201ENST00000261811 ZBTB40Q9NUA8 1239 aa23.27■■□□□ 1.32
CYSTM1-201ENST00000261811 HMMRO75330 724 aa23.26■■□□□ 1.31
CYSTM1-201ENST00000261811 PDE8BO95263 885 aa23.26■■□□□ 1.31
CYSTM1-201ENST00000261811 G3BP1Q13283 466 aaKnown RBP eCLIP23.26■■□□□ 1.31
CYSTM1-201ENST00000261811 CEP126Q9P2H0 1117 aa23.26■■□□□ 1.31
CYSTM1-201ENST00000261811 ECE2O60344 883 aa23.25■■□□□ 1.31
CYSTM1-201ENST00000261811 PODNQ7Z5L7 613 aa23.25■■□□□ 1.31
CYSTM1-201ENST00000261811 GPC2Q8N158 579 aa23.25■■□□□ 1.31
CYSTM1-201ENST00000261811 SSH3Q8TE77 659 aa23.25■■□□□ 1.31
CYSTM1-201ENST00000261811 GPR101Q96P66 508 aaPredicted RBP23.25■■□□□ 1.31
CYSTM1-201ENST00000261811 COA1Q9GZY4 146 aa23.25■■□□□ 1.31
CYSTM1-201ENST00000261811 DBNDD1Q9H9R9 158 aa23.25■■□□□ 1.31
CYSTM1-201ENST00000261811 MYH13Q9UKX3 1938 aa23.24■■□□□ 1.31
CYSTM1-201ENST00000261811 WDR90Q96KV7 1748 aa23.24■■□□□ 1.31
CYSTM1-201ENST00000261811 COL4A5P29400 1685 aa23.24■■□□□ 1.31
CYSTM1-201ENST00000261811 PNMA6EA0A0J9YXQ4 647 aa23.24■■□□□ 1.31
CYSTM1-201ENST00000261811 DOK7Q18PE1 504 aa23.24■■□□□ 1.31
CYSTM1-201ENST00000261811 CIAPIN1Q6FI81 312 aa23.24■■□□□ 1.31
CYSTM1-201ENST00000261811 CEP85Q6P2H3 762 aa23.24■■□□□ 1.31
CYSTM1-201ENST00000261811 C15orf52Q6ZUT6 534 aaKnown RBP23.24■■□□□ 1.31
CYSTM1-201ENST00000261811 ZNF804AQ7Z570 1209 aa23.24■■□□□ 1.31
CYSTM1-201ENST00000261811 PA2G4Q9UQ80 394 aaKnown RBP23.24■■□□□ 1.31
CYSTM1-201ENST00000261811 OS9Q13438 667 aaPredicted RBP23.23■■□□□ 1.31
CYSTM1-201ENST00000261811 POLA2Q14181 598 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms