RNA–Protein interactions for RNA: ENST00000261368.12

SNCAIP-202, Transcript of synuclein alpha interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCAIP, Length 3,745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-202ENST00000261368 STK38Q15208 465 aa18.99■□□□□ 0.63
SNCAIP-202ENST00000261368 HSP90AB3PQ58FF7 597 aa18.99■□□□□ 0.63
SNCAIP-202ENST00000261368 ZNF710Q8N1W2 664 aa18.99■□□□□ 0.63
SNCAIP-202ENST00000261368 USP42Q9H9J4 1324 aaKnown RBP18.98■□□□□ 0.63
SNCAIP-202ENST00000261368 PXDNLA1KZ92 1463 aa18.98■□□□□ 0.63
SNCAIP-202ENST00000261368 CEMIPQ8WUJ3 1361 aa18.98■□□□□ 0.63
SNCAIP-202ENST00000261368 DIP2BQ9P265 1576 aa18.98■□□□□ 0.63
SNCAIP-202ENST00000261368 ARID5BQ14865 1188 aa18.98■□□□□ 0.63
SNCAIP-202ENST00000261368 ZSCAN25Q6NSZ9 544 aa18.98■□□□□ 0.63
SNCAIP-202ENST00000261368 AXIN2Q9Y2T1 843 aa18.98■□□□□ 0.63
SNCAIP-202ENST00000261368 ZNF396Q96N95 335 aaPredicted RBP18.97■□□□□ 0.63
SNCAIP-202ENST00000261368 A0A0G2JS52 829 aa18.97■□□□□ 0.63
SNCAIP-202ENST00000261368 PDIA4P13667 645 aaKnown RBP18.97■□□□□ 0.63
SNCAIP-202ENST00000261368 CABP4P57796 275 aa18.97■□□□□ 0.63
SNCAIP-202ENST00000261368 SCRN1Q12765 414 aa18.97■□□□□ 0.63
SNCAIP-202ENST00000261368 CABLES1Q8TDN4 633 aa18.97■□□□□ 0.63
SNCAIP-202ENST00000261368 ZBTB3Q9H5J0 574 aa18.97■□□□□ 0.63
SNCAIP-202ENST00000261368 SPTLC3Q9NUV7 552 aa18.97■□□□□ 0.63
SNCAIP-202ENST00000261368 NAA30Q147X3 362 aaPredicted RBP18.97■□□□□ 0.63
SNCAIP-202ENST00000261368 AOPEPQ8N6M6 819 aa18.96■□□□□ 0.63
SNCAIP-202ENST00000261368 CACTINQ8WUQ7 758 aaKnown RBP18.96■□□□□ 0.63
SNCAIP-202ENST00000261368 SYTL4Q96C24 671 aaPredicted RBP18.96■□□□□ 0.63
SNCAIP-202ENST00000261368 IL17RAQ96F46 866 aa18.96■□□□□ 0.63
SNCAIP-202ENST00000261368 METTL22Q9BUU2 404 aaPredicted RBP18.96■□□□□ 0.63
SNCAIP-202ENST00000261368 IFIT1P09914 478 aaKnown RBP18.96■□□□□ 0.63
SNCAIP-202ENST00000261368 SKILP12757 684 aa18.96■□□□□ 0.63
SNCAIP-202ENST00000261368 ZNF771Q7L3S4 317 aaPredicted RBP18.96■□□□□ 0.63
SNCAIP-202ENST00000261368 KRT28Q7Z3Y7 464 aa18.96■□□□□ 0.63
SNCAIP-202ENST00000261368 STK11IPQ8N1F8 1099 aa18.96■□□□□ 0.63
SNCAIP-202ENST00000261368 DIP2AQ14689 1571 aa18.96■□□□□ 0.63
SNCAIP-202ENST00000261368 CEP57L1Q8IYX8 460 aa18.96■□□□□ 0.63
SNCAIP-202ENST00000261368 ZSCAN16Q9H4T2 348 aaPredicted RBP18.96■□□□□ 0.63
SNCAIP-202ENST00000261368 APPP05067 770 aa18.95■□□□□ 0.62
SNCAIP-202ENST00000261368 STX1AQ16623 288 aa18.95■□□□□ 0.62
SNCAIP-202ENST00000261368 C11orf57Q6ZUT1 292 aaPredicted RBP18.95■□□□□ 0.62
SNCAIP-202ENST00000261368 ZNF594Q96JF6 807 aaPredicted RBP18.95■□□□□ 0.62
SNCAIP-202ENST00000261368 A0A1B0GVL5 298 aa18.95■□□□□ 0.62
SNCAIP-202ENST00000261368 PTPN14Q15678 1187 aa18.95■□□□□ 0.62
SNCAIP-202ENST00000261368 ATP2B3Q16720 1220 aa18.95■□□□□ 0.62
SNCAIP-202ENST00000261368 USP28Q96RU2 1077 aa18.95■□□□□ 0.62
SNCAIP-202ENST00000261368 ELP1O95163 1332 aa18.95■□□□□ 0.62
SNCAIP-202ENST00000261368 SYNE3Q6ZMZ3 975 aa18.95■□□□□ 0.62
SNCAIP-202ENST00000261368 DDX17Q92841 729 aaKnown RBP18.95■□□□□ 0.62
SNCAIP-202ENST00000261368 ATP5JP18859 108 aa18.94■□□□□ 0.62
SNCAIP-202ENST00000261368 CEP135Q66GS9 1140 aa18.94■□□□□ 0.62
SNCAIP-202ENST00000261368 PROSER2Q86WR7 435 aaPredicted RBP18.94■□□□□ 0.62
SNCAIP-202ENST00000261368 DHX32Q7L7V1 743 aaKnown RBP18.94■□□□□ 0.62
SNCAIP-202ENST00000261368 SNRPA1P09661 255 aaKnown RBP18.94■□□□□ 0.62
SNCAIP-202ENST00000261368 TTLL5Q6EMB2 1281 aa18.94■□□□□ 0.62
SNCAIP-202ENST00000261368 PAG1Q9NWQ8 432 aa18.94■□□□□ 0.62
SNCAIP-202ENST00000261368 NRDCO43847 1150 aa18.93■□□□□ 0.62
SNCAIP-202ENST00000261368 ARHGEF25Q86VW2 580 aa18.93■□□□□ 0.62
SNCAIP-202ENST00000261368 HOMER1Q86YM7 354 aa18.93■□□□□ 0.62
SNCAIP-202ENST00000261368 SMAP1Q8IYB5 467 aaPredicted RBP18.93■□□□□ 0.62
SNCAIP-202ENST00000261368 RESTQ13127 1097 aa18.93■□□□□ 0.62
SNCAIP-202ENST00000261368 CCDC144BQ3MJ40 725 aa18.93■□□□□ 0.62
SNCAIP-202ENST00000261368 RALYLQ86SE5 291 aaKnown RBP18.93■□□□□ 0.62
SNCAIP-202ENST00000261368 CCDC144CPQ8IYA2 1237 aa18.93■□□□□ 0.62
SNCAIP-202ENST00000261368 ANO10Q9NW15 660 aa18.93■□□□□ 0.62
SNCAIP-202ENST00000261368 PTPN12Q05209 780 aaKnown RBP18.92■□□□□ 0.62
SNCAIP-202ENST00000261368 NAT10Q9H0A0 1025 aaKnown RBP18.92■□□□□ 0.62
SNCAIP-202ENST00000261368 CCDC69A6NI79 296 aa18.92■□□□□ 0.62
SNCAIP-202ENST00000261368 A0A0G2JLW4 131 aa18.91■□□□□ 0.62
SNCAIP-202ENST00000261368 SLC52A2Q9HAB3 445 aa18.91■□□□□ 0.62
SNCAIP-202ENST00000261368 RGPD8O14715 1765 aaPredicted RBP18.91■□□□□ 0.62
SNCAIP-202ENST00000261368 GPHNQ9NQX3 736 aaPredicted RBP18.91■□□□□ 0.62
SNCAIP-202ENST00000261368 TPM4P67936 248 aa18.9■□□□□ 0.62
SNCAIP-202ENST00000261368 C8orf76Q96K31 380 aa18.9■□□□□ 0.62
SNCAIP-202ENST00000261368 TTC39AQ5SRH9 613 aa18.9■□□□□ 0.62
SNCAIP-202ENST00000261368 KBTBD3Q8NAB2 608 aa18.9■□□□□ 0.62
SNCAIP-202ENST00000261368 TDRD7Q8NHU6 1098 aaKnown RBP18.9■□□□□ 0.62
SNCAIP-202ENST00000261368 HMGB1P09429 215 aaKnown RBP18.9■□□□□ 0.62
SNCAIP-202ENST00000261368 IFNL2Q8IZJ0 200 aa18.9■□□□□ 0.62
SNCAIP-202ENST00000261368 KCNB2Q92953 911 aa18.9■□□□□ 0.62
SNCAIP-202ENST00000261368 TOMM22Q9NS69 142 aa18.9■□□□□ 0.62
SNCAIP-202ENST00000261368 GOLGA8BA8MQT2 603 aa18.89■□□□□ 0.62
SNCAIP-202ENST00000261368 STOX1Q6ZVD7 989 aa18.89■□□□□ 0.62
SNCAIP-202ENST00000261368 CEP126Q9P2H0 1117 aa18.89■□□□□ 0.62
SNCAIP-202ENST00000261368 XRN1Q8IZH2 1706 aaKnown RBP18.89■□□□□ 0.61
SNCAIP-202ENST00000261368 SMTNL1A8MU46 457 aa18.89■□□□□ 0.61
SNCAIP-202ENST00000261368 TMC6Q7Z403 805 aa18.89■□□□□ 0.61
SNCAIP-202ENST00000261368 NSUN7Q8NE18 718 aaKnown RBP18.89■□□□□ 0.61
SNCAIP-202ENST00000261368 COPRSQ9NQ92 184 aa18.89■□□□□ 0.61
SNCAIP-202ENST00000261368 CTAGE5O15320 804 aa18.89■□□□□ 0.61
SNCAIP-202ENST00000261368 PDIA6Q15084 440 aa18.89■□□□□ 0.61
SNCAIP-202ENST00000261368 FAM177A1Q8N128 213 aaPredicted RBP18.89■□□□□ 0.61
SNCAIP-202ENST00000261368 RGPD1P0DJD0 1748 aa18.89■□□□□ 0.61
SNCAIP-202ENST00000261368 ORC3Q9UBD5 711 aaPredicted RBP18.88■□□□□ 0.61
SNCAIP-202ENST00000261368 FAM208AQ9UK61 1670 aaKnown RBP18.88■□□□□ 0.61
SNCAIP-202ENST00000261368 MARCKSP29966 332 aaPredicted RBP18.88■□□□□ 0.61
SNCAIP-202ENST00000261368 GOLPH3LQ9H4A5 285 aa18.88■□□□□ 0.61
SNCAIP-202ENST00000261368 GJB4Q9NTQ9 266 aa18.88■□□□□ 0.61
SNCAIP-202ENST00000261368 KLF18A0A0U1RQI7 1052 aa18.88■□□□□ 0.61
SNCAIP-202ENST00000261368 PXDNQ92626 1479 aa18.88■□□□□ 0.61
SNCAIP-202ENST00000261368 E7EWF7 191 aa18.87■□□□□ 0.61
SNCAIP-202ENST00000261368 RXRAP19793 462 aa18.87■□□□□ 0.61
SNCAIP-202ENST00000261368 HSP90AA4PQ58FG1 418 aa18.87■□□□□ 0.61
SNCAIP-202ENST00000261368 MRPS27Q92552 414 aaKnown RBP18.87■□□□□ 0.61
SNCAIP-202ENST00000261368 HAUS7Q99871 368 aa18.87■□□□□ 0.61
SNCAIP-202ENST00000261368 MED23Q9ULK4 1368 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms