RNA–Protein interactions for RNA: ENST00000257075.9

PUM1-201, Transcript of pumilio RNA binding family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PUM1, Length 5,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-201ENST00000257075 WDR66Q8TBY9 1149 aa12.25□□□□□ -0.45
PUM1-201ENST00000257075 PAG1Q9NWQ8 432 aa12.25□□□□□ -0.45
PUM1-201ENST00000257075 CSADQ9Y600 493 aa12.25□□□□□ -0.45
PUM1-201ENST00000257075 NPHP4O75161 1426 aaPredicted RBP12.25□□□□□ -0.45
PUM1-201ENST00000257075 ERVV-2B6SEH9 535 aa12.25□□□□□ -0.45
PUM1-201ENST00000257075 JAKMIP3Q5VZ66 844 aa12.25□□□□□ -0.45
PUM1-201ENST00000257075 CCDC24Q8N4L8 307 aa12.25□□□□□ -0.45
PUM1-201ENST00000257075 TAF4BQ92750 862 aa12.25□□□□□ -0.45
PUM1-201ENST00000257075 SCAND2PQ9GZW5 306 aaPredicted RBP12.25□□□□□ -0.45
PUM1-201ENST00000257075 ITGA6P23229 1130 aa12.25□□□□□ -0.45
PUM1-201ENST00000257075 ANAPC15P60006 121 aa12.25□□□□□ -0.45
PUM1-201ENST00000257075 TNFAIP1Q13829 316 aa12.25□□□□□ -0.45
PUM1-201ENST00000257075 RBM27Q9P2N5 1060 aaKnown RBP12.25□□□□□ -0.45
PUM1-201ENST00000257075 A0A1W2PP64 1363 aa12.25□□□□□ -0.45
PUM1-201ENST00000257075 NASPP49321 788 aaPredicted RBP12.24□□□□□ -0.45
PUM1-201ENST00000257075 MCMDC2Q4G0Z9 681 aa12.24□□□□□ -0.45
PUM1-201ENST00000257075 SMCR8Q8TEV9 937 aaPredicted RBP12.24□□□□□ -0.45
PUM1-201ENST00000257075 RRP36Q96EU6 259 aaKnown RBP12.24□□□□□ -0.45
PUM1-201ENST00000257075 A1BGP04217 495 aa12.24□□□□□ -0.45
PUM1-201ENST00000257075 RTN1Q16799 776 aa12.24□□□□□ -0.45
PUM1-201ENST00000257075 CALM1P0DP23 149 aa12.24□□□□□ -0.45
PUM1-201ENST00000257075 CALM2P0DP24 149 aa12.24□□□□□ -0.45
PUM1-201ENST00000257075 CALM3P0DP25 149 aa12.24□□□□□ -0.45
PUM1-201ENST00000257075 TAF12Q16514 161 aa12.24□□□□□ -0.45
PUM1-201ENST00000257075 USP48Q86UV5 1035 aa12.24□□□□□ -0.45
PUM1-201ENST00000257075 TRAK2O60296 914 aa12.24□□□□□ -0.45
PUM1-201ENST00000257075 ATP8B2P98198 1209 aa12.24□□□□□ -0.45
PUM1-201ENST00000257075 KLF18A0A0U1RQI7 1052 aa12.24□□□□□ -0.45
PUM1-201ENST00000257075 STX6O43752 255 aa12.24□□□□□ -0.45
PUM1-201ENST00000257075 ZRSR2Q15696 482 aaKnown RBP12.24□□□□□ -0.45
PUM1-201ENST00000257075 RAB11FIP4Q86YS3 637 aa12.24□□□□□ -0.45
PUM1-201ENST00000257075 CERS3Q8IU89 383 aa12.24□□□□□ -0.45
PUM1-201ENST00000257075 BACH1O14867 736 aa12.23□□□□□ -0.45
PUM1-201ENST00000257075 DCPSQ96C86 337 aaKnown RBP12.23□□□□□ -0.45
PUM1-201ENST00000257075 PRAG1Q86YV5 1406 aa12.23□□□□□ -0.45
PUM1-201ENST00000257075 RFX1P22670 979 aa12.23□□□□□ -0.45
PUM1-201ENST00000257075 IRX3P78415 501 aaPredicted RBP12.23□□□□□ -0.45
PUM1-201ENST00000257075 SKIDA1Q1XH10 827 aa12.23□□□□□ -0.45
PUM1-201ENST00000257075 SULF1Q8IWU6 871 aa12.23□□□□□ -0.45
PUM1-201ENST00000257075 TTC16Q8NEE8 873 aa12.23□□□□□ -0.45
PUM1-201ENST00000257075 BABAM1Q9NWV8 329 aa12.23□□□□□ -0.45
PUM1-201ENST00000257075 PA2G4Q9UQ80 394 aaKnown RBP12.23□□□□□ -0.45
PUM1-201ENST00000257075 SETQ01105 290 aaPredicted RBP12.23□□□□□ -0.45
PUM1-201ENST00000257075 PUM3Q15397 648 aaKnown RBP12.23□□□□□ -0.45
PUM1-201ENST00000257075 CCDC40Q4G0X9 1142 aa12.23□□□□□ -0.45
PUM1-201ENST00000257075 PLCD3Q8N3E9 789 aa12.23□□□□□ -0.45
PUM1-201ENST00000257075 ANKRD62A6NC57 917 aa12.22□□□□□ -0.45
PUM1-201ENST00000257075 USP8P40818 1118 aa12.22□□□□□ -0.45
PUM1-201ENST00000257075 HSP90AA2PQ14568 343 aaPredicted RBP12.22□□□□□ -0.45
PUM1-201ENST00000257075 ZNF710Q8N1W2 664 aa12.22□□□□□ -0.45
PUM1-201ENST00000257075 CNNM3Q8NE01 707 aa12.22□□□□□ -0.45
PUM1-201ENST00000257075 TNPO1Q92973 898 aaKnown RBP12.22□□□□□ -0.45
PUM1-201ENST00000257075 PUF60Q9UHX1 559 aaKnown RBP12.22□□□□□ -0.45
PUM1-201ENST00000257075 EDC4Q6P2E9 1401 aaKnown RBP12.22□□□□□ -0.45
PUM1-201ENST00000257075 TBC1D22AQ8WUA7 517 aa12.22□□□□□ -0.45
PUM1-201ENST00000257075 ASXL1Q8IXJ9 1541 aa12.22□□□□□ -0.45
PUM1-201ENST00000257075 PHACTR2O75167 634 aa12.22□□□□□ -0.45
PUM1-201ENST00000257075 OTUD7BQ6GQQ9 843 aa12.22□□□□□ -0.45
PUM1-201ENST00000257075 KIAA1328Q86T90 577 aa12.22□□□□□ -0.45
PUM1-201ENST00000257075 EPB41L2O43491 1005 aaKnown RBP12.22□□□□□ -0.45
PUM1-201ENST00000257075 SLC5A4Q9NY91 659 aa12.22□□□□□ -0.45
PUM1-201ENST00000257075 SHANK2Q9UPX8 1470 aa12.21□□□□□ -0.45
PUM1-201ENST00000257075 PLEKHG3A1L390 1219 aa12.21□□□□□ -0.45
PUM1-201ENST00000257075 KIF4AO95239 1232 aa12.21□□□□□ -0.45
PUM1-201ENST00000257075 CFAP100Q494V2 611 aa12.21□□□□□ -0.45
PUM1-201ENST00000257075 LRSAM1Q6UWE0 723 aa12.21□□□□□ -0.45
PUM1-201ENST00000257075 APBB1IPQ7Z5R6 666 aaPredicted RBP12.21□□□□□ -0.45
PUM1-201ENST00000257075 METTL22Q9BUU2 404 aaPredicted RBP12.21□□□□□ -0.45
PUM1-201ENST00000257075 RNF113AO15541 343 aaKnown RBP12.21□□□□□ -0.45
PUM1-201ENST00000257075 BMP15O95972 392 aa12.21□□□□□ -0.45
PUM1-201ENST00000257075 TFCP2Q12800 502 aa12.21□□□□□ -0.45
PUM1-201ENST00000257075 TEX35Q5T0J7 233 aa12.21□□□□□ -0.45
PUM1-201ENST00000257075 TSHZ3Q63HK5 1081 aa12.21□□□□□ -0.45
PUM1-201ENST00000257075 SAP30BPQ9UHR5 308 aaKnown RBP12.21□□□□□ -0.45
PUM1-201ENST00000257075 SPA17Q15506 151 aa12.21□□□□□ -0.46
PUM1-201ENST00000257075 SPC25Q9HBM1 224 aa12.21□□□□□ -0.46
PUM1-201ENST00000257075 ZNF335Q9H4Z2 1342 aaPredicted RBP12.21□□□□□ -0.46
PUM1-201ENST00000257075 SP4Q02446 784 aa12.2□□□□□ -0.46
PUM1-201ENST00000257075 RTL9Q8NET4 1388 aa12.2□□□□□ -0.46
PUM1-201ENST00000257075 EYA2O00167 538 aa12.2□□□□□ -0.46
PUM1-201ENST00000257075 HOXB7P09629 217 aa12.2□□□□□ -0.46
PUM1-201ENST00000257075 MAP3K11Q16584 847 aa12.2□□□□□ -0.46
PUM1-201ENST00000257075 SPC24Q8NBT2 197 aa12.2□□□□□ -0.46
PUM1-201ENST00000257075 CIZ1Q9ULV3 898 aaPredicted RBP12.2□□□□□ -0.46
PUM1-201ENST00000257075 CALML3P27482 149 aa12.2□□□□□ -0.46
PUM1-201ENST00000257075 RPS8P62241 208 aaKnown RBP12.2□□□□□ -0.46
PUM1-201ENST00000257075 BRF1Q92994 677 aa12.2□□□□□ -0.46
PUM1-201ENST00000257075 COL17A1Q9UMD9 1497 aaPredicted RBP12.2□□□□□ -0.46
PUM1-201ENST00000257075 PRC1O43663 620 aa12.19□□□□□ -0.46
PUM1-201ENST00000257075 ZBED4O75132 1171 aa12.19□□□□□ -0.46
PUM1-201ENST00000257075 MTIF2P46199 727 aaKnown RBP12.19□□□□□ -0.46
PUM1-201ENST00000257075 RBM25P49756 843 aaKnown RBP12.19□□□□□ -0.46
PUM1-201ENST00000257075 SEPT12Q8IYM1 358 aa12.19□□□□□ -0.46
PUM1-201ENST00000257075 MRPL50Q8N5N7 158 aaKnown RBP12.19□□□□□ -0.46
PUM1-201ENST00000257075 ZNF526Q8TF50 670 aaPredicted RBP12.19□□□□□ -0.46
PUM1-201ENST00000257075 WDR70Q9NW82 654 aa12.19□□□□□ -0.46
PUM1-201ENST00000257075 MRE11P49959 708 aa12.19□□□□□ -0.46
PUM1-201ENST00000257075 GNA11P29992 359 aa12.19□□□□□ -0.46
PUM1-201ENST00000257075 ZYXQ15942 572 aaKnown RBP12.19□□□□□ -0.46
PUM1-201ENST00000257075 ENOX2Q16206 610 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms