RNA–Protein interactions for RNA: ENST00000254853.9

SLC52A1-201, Transcript of solute carrier family 52 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC52A1, Length 2,377 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1-201ENST00000254853 SCRN1Q12765 414 aa20.17■□□□□ 0.82
SLC52A1-201ENST00000254853 STOX1Q6ZVD7 989 aa20.17■□□□□ 0.82
SLC52A1-201ENST00000254853 CCDC9Q9Y3X0 531 aaKnown RBP20.17■□□□□ 0.82
SLC52A1-201ENST00000254853 KIF3AQ9Y496 699 aa20.17■□□□□ 0.82
SLC52A1-201ENST00000254853 A0A087WZG4 1122 aa20.16■□□□□ 0.82
SLC52A1-201ENST00000254853 CCDC186Q7Z3E2 898 aa20.16■□□□□ 0.82
SLC52A1-201ENST00000254853 TDRD7Q8NHU6 1098 aaKnown RBP20.16■□□□□ 0.82
SLC52A1-201ENST00000254853 ZNF75DP51815 510 aa20.16■□□□□ 0.82
SLC52A1-201ENST00000254853 TTC5Q8N0Z6 440 aa20.16■□□□□ 0.82
SLC52A1-201ENST00000254853 DNAJC25Q9H1X3 360 aa20.16■□□□□ 0.82
SLC52A1-201ENST00000254853 PLA2G4DQ86XP0 818 aa20.15■□□□□ 0.82
SLC52A1-201ENST00000254853 TRIM5Q9C035 493 aa20.15■□□□□ 0.82
SLC52A1-201ENST00000254853 ZSCAN16Q9H4T2 348 aaPredicted RBP20.15■□□□□ 0.82
SLC52A1-201ENST00000254853 NRBP1Q9UHY1 535 aa20.15■□□□□ 0.82
SLC52A1-201ENST00000254853 MEGF6O75095 1541 aa20.15■□□□□ 0.82
SLC52A1-201ENST00000254853 ZNF165P49910 485 aa20.15■□□□□ 0.82
SLC52A1-201ENST00000254853 CASP7P55210 303 aa20.15■□□□□ 0.82
SLC52A1-201ENST00000254853 FGD1P98174 961 aa20.15■□□□□ 0.82
SLC52A1-201ENST00000254853 SLFNL1Q499Z3 407 aa20.15■□□□□ 0.82
SLC52A1-201ENST00000254853 DRC7Q8IY82 874 aa20.15■□□□□ 0.82
SLC52A1-201ENST00000254853 IFNL2Q8IZJ0 200 aa20.15■□□□□ 0.82
SLC52A1-201ENST00000254853 SMARCC2Q8TAQ2 1214 aa20.15■□□□□ 0.82
SLC52A1-201ENST00000254853 FOSBP53539 338 aa20.14■□□□□ 0.82
SLC52A1-201ENST00000254853 CEBPZQ03701 1054 aaKnown RBP20.14■□□□□ 0.82
SLC52A1-201ENST00000254853 LRMPQ12912 555 aa20.14■□□□□ 0.82
SLC52A1-201ENST00000254853 KBTBD3Q8NAB2 608 aa20.14■□□□□ 0.82
SLC52A1-201ENST00000254853 PFKFB2O60825 505 aa20.14■□□□□ 0.81
SLC52A1-201ENST00000254853 LMBR1LQ6UX01 489 aa20.14■□□□□ 0.81
SLC52A1-201ENST00000254853 CCDC94Q9BW85 323 aaPredicted RBP20.14■□□□□ 0.81
SLC52A1-201ENST00000254853 CFAP45Q9UL16 551 aa20.14■□□□□ 0.81
SLC52A1-201ENST00000254853 RIOK3O14730 519 aaKnown RBP20.13■□□□□ 0.81
SLC52A1-201ENST00000254853 NSUN7Q8NE18 718 aaKnown RBP20.13■□□□□ 0.81
SLC52A1-201ENST00000254853 FMNL2Q96PY5 1086 aa20.13■□□□□ 0.81
SLC52A1-201ENST00000254853 BCL2L12Q9HB09 334 aa20.13■□□□□ 0.81
SLC52A1-201ENST00000254853 SH3TC1Q8TE82 1336 aa20.13■□□□□ 0.81
SLC52A1-201ENST00000254853 AFDNP55196 1824 aaKnown RBP20.13■□□□□ 0.81
SLC52A1-201ENST00000254853 ADD1P35611 737 aaKnown RBP20.13■□□□□ 0.81
SLC52A1-201ENST00000254853 CHAF1AQ13111 956 aaPredicted RBP20.13■□□□□ 0.81
SLC52A1-201ENST00000254853 LLPHQ9BRT6 129 aaKnown RBP20.13■□□□□ 0.81
SLC52A1-201ENST00000254853 CTDNEP1O95476 244 aa20.12■□□□□ 0.81
SLC52A1-201ENST00000254853 DHX32Q7L7V1 743 aaKnown RBP20.12■□□□□ 0.81
SLC52A1-201ENST00000254853 PKNOX2Q96KN3 472 aa20.12■□□□□ 0.81
SLC52A1-201ENST00000254853 GOLIM4O00461 696 aa20.12■□□□□ 0.81
SLC52A1-201ENST00000254853 CYP27B1O15528 508 aa20.12■□□□□ 0.81
SLC52A1-201ENST00000254853 APOBRQ0VD83 1088 aa20.12■□□□□ 0.81
SLC52A1-201ENST00000254853 NEUROD6Q96NK8 337 aa20.12■□□□□ 0.81
SLC52A1-201ENST00000254853 FTOQ9C0B1 505 aaKnown RBP eCLIP20.12■□□□□ 0.81
SLC52A1-201ENST00000254853 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.11■□□□□ 0.81
SLC52A1-201ENST00000254853 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.11■□□□□ 0.81
SLC52A1-201ENST00000254853 A0A0G2JLW4 131 aa20.1■□□□□ 0.81
SLC52A1-201ENST00000254853 PTPDC1A2A3K4 754 aa20.1■□□□□ 0.81
SLC52A1-201ENST00000254853 HMGB1P09429 215 aaKnown RBP20.1■□□□□ 0.81
SLC52A1-201ENST00000254853 FOXO4P98177 505 aa20.1■□□□□ 0.81
SLC52A1-201ENST00000254853 NAA16Q6N069 864 aaPredicted RBP20.1■□□□□ 0.81
SLC52A1-201ENST00000254853 ZSCAN25Q6NSZ9 544 aa20.1■□□□□ 0.81
SLC52A1-201ENST00000254853 PLBD2Q8NHP8 589 aa20.1■□□□□ 0.81
SLC52A1-201ENST00000254853 DCAF5Q96JK2 942 aa20.1■□□□□ 0.81
SLC52A1-201ENST00000254853 ZNF142P52746 1687 aaPredicted RBP20.1■□□□□ 0.81
SLC52A1-201ENST00000254853 CSB-PGBD3P0DP91 1061 aa20.1■□□□□ 0.81
SLC52A1-201ENST00000254853 ATG9AQ7Z3C6 839 aa20.1■□□□□ 0.81
SLC52A1-201ENST00000254853 PAG1Q9NWQ8 432 aa20.1■□□□□ 0.81
SLC52A1-201ENST00000254853 ARFGEF2Q9Y6D5 1785 aa20.1■□□□□ 0.81
SLC52A1-201ENST00000254853 C1orf167Q5SNV9 1468 aa20.1■□□□□ 0.81
SLC52A1-201ENST00000254853 PALLDQ8WX93 1383 aa20.1■□□□□ 0.81
SLC52A1-201ENST00000254853 CCT2P78371 535 aaKnown RBP20.09■□□□□ 0.81
SLC52A1-201ENST00000254853 CCAR1Q8IX12 1150 aaKnown RBP20.09■□□□□ 0.81
SLC52A1-201ENST00000254853 HELLSQ9NRZ9 838 aa20.09■□□□□ 0.81
SLC52A1-201ENST00000254853 RCOR1Q9UKL0 485 aa20.09■□□□□ 0.81
SLC52A1-201ENST00000254853 TIMM10P62072 90 aa20.09■□□□□ 0.81
SLC52A1-201ENST00000254853 EXOSC10Q01780 885 aaKnown RBP20.09■□□□□ 0.81
SLC52A1-201ENST00000254853 GOLPH3LQ9H4A5 285 aa20.09■□□□□ 0.81
SLC52A1-201ENST00000254853 CLIP2Q9UDT6 1046 aa20.09■□□□□ 0.81
SLC52A1-201ENST00000254853 PPFIA3O75145 1194 aa20.08■□□□□ 0.81
SLC52A1-201ENST00000254853 IQCB1Q15051 598 aa20.08■□□□□ 0.81
SLC52A1-201ENST00000254853 C11orf57Q6ZUT1 292 aaPredicted RBP20.08■□□□□ 0.81
SLC52A1-201ENST00000254853 PROSER2Q86WR7 435 aaPredicted RBP20.08■□□□□ 0.81
SLC52A1-201ENST00000254853 DSCC1Q9BVC3 393 aa20.08■□□□□ 0.81
SLC52A1-201ENST00000254853 CCDC144BQ3MJ40 725 aa20.08■□□□□ 0.8
SLC52A1-201ENST00000254853 CCDC144CPQ8IYA2 1237 aa20.08■□□□□ 0.8
SLC52A1-201ENST00000254853 NCOA5Q9HCD5 579 aaKnown RBP20.08■□□□□ 0.8
SLC52A1-201ENST00000254853 MST1RQ04912 1400 aa20.07■□□□□ 0.8
SLC52A1-201ENST00000254853 LAMA4Q16363 1823 aa20.07■□□□□ 0.8
SLC52A1-201ENST00000254853 H7C1W4 665 aa20.07■□□□□ 0.8
SLC52A1-201ENST00000254853 CAVIN2O95810 425 aa20.07■□□□□ 0.8
SLC52A1-201ENST00000254853 CABP4P57796 275 aa20.07■□□□□ 0.8
SLC52A1-201ENST00000254853 ZMYM1Q5SVZ6 1142 aa20.07■□□□□ 0.8
SLC52A1-201ENST00000254853 USP28Q96RU2 1077 aa20.07■□□□□ 0.8
SLC52A1-201ENST00000254853 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.07■□□□□ 0.8
SLC52A1-201ENST00000254853 E7EWF7 191 aa20.07■□□□□ 0.8
SLC52A1-201ENST00000254853 CACTINQ8WUQ7 758 aaKnown RBP20.07■□□□□ 0.8
SLC52A1-201ENST00000254853 AGXT2Q9BYV1 514 aa20.07■□□□□ 0.8
SLC52A1-201ENST00000254853 NAP1L2Q9ULW6 460 aaPredicted RBP20.07■□□□□ 0.8
SLC52A1-201ENST00000254853 HSPD1P10809 573 aaKnown RBP20.06■□□□□ 0.8
SLC52A1-201ENST00000254853 DDX17Q92841 729 aaKnown RBP20.06■□□□□ 0.8
SLC52A1-201ENST00000254853 ALS2Q96Q42 1657 aa20.06■□□□□ 0.8
SLC52A1-201ENST00000254853 NBPF26B4DH59 902 aa20.06■□□□□ 0.8
SLC52A1-201ENST00000254853 GUCY1B3Q02153 619 aa20.06■□□□□ 0.8
SLC52A1-201ENST00000254853 SNW1Q13573 536 aaKnown RBP20.06■□□□□ 0.8
SLC52A1-201ENST00000254853 NBPF14Q5TI25 921 aa20.06■□□□□ 0.8
SLC52A1-201ENST00000254853 NBPF10Q6P3W6 841 aaKnown RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms