RNA–Protein interactions for RNA: ENST00000254624.9

EFR3A-201, Transcript of EFR3 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFR3A, Length 5,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3A-201ENST00000254624 ZSCAN12O43309 604 aa21.01■□□□□ 0.95
EFR3A-201ENST00000254624 STX1AQ16623 288 aa21.01■□□□□ 0.95
EFR3A-201ENST00000254624 MBD5Q9P267 1494 aa21■□□□□ 0.95
EFR3A-201ENST00000254624 UBE2HP62256 183 aa21■□□□□ 0.95
EFR3A-201ENST00000254624 ZSCAN22P10073 491 aaPredicted RBP21■□□□□ 0.95
EFR3A-201ENST00000254624 SMC5Q8IY18 1101 aa21■□□□□ 0.95
EFR3A-201ENST00000254624 YEATS2Q9ULM3 1422 aa21■□□□□ 0.95
EFR3A-201ENST00000254624 CACNA2D4Q7Z3S7 1137 aa20.99■□□□□ 0.95
EFR3A-201ENST00000254624 CCNL1Q9UK58 526 aaPredicted RBP20.99■□□□□ 0.95
EFR3A-201ENST00000254624 GOLGA6L10A6NI86 522 aa20.99■□□□□ 0.95
EFR3A-201ENST00000254624 TOP1P11387 765 aaKnown RBP20.99■□□□□ 0.95
EFR3A-201ENST00000254624 RLBP1P12271 317 aa20.99■□□□□ 0.95
EFR3A-201ENST00000254624 CETN2P41208 172 aa20.99■□□□□ 0.95
EFR3A-201ENST00000254624 TFIP11Q9UBB9 837 aaKnown RBP20.99■□□□□ 0.95
EFR3A-201ENST00000254624 KDM5DQ9BY66 1539 aa20.99■□□□□ 0.95
EFR3A-201ENST00000254624 CCDC102BQ68D86 513 aa20.99■□□□□ 0.95
EFR3A-201ENST00000254624 DENND2AQ9ULE3 1009 aa20.99■□□□□ 0.95
EFR3A-201ENST00000254624 FAM114A1Q8IWE2 563 aa20.99■□□□□ 0.95
EFR3A-201ENST00000254624 CCDC150Q8NCX0 1101 aa20.99■□□□□ 0.95
EFR3A-201ENST00000254624 ERMNQ8TAM6 284 aa20.99■□□□□ 0.95
EFR3A-201ENST00000254624 ALG1Q9BT22 464 aa20.99■□□□□ 0.95
EFR3A-201ENST00000254624 NSFL1CQ9UNZ2 370 aaKnown RBP20.99■□□□□ 0.95
EFR3A-201ENST00000254624 Q6ZUG5 572 aa20.98■□□□□ 0.95
EFR3A-201ENST00000254624 FAM177A1Q8N128 213 aaPredicted RBP20.98■□□□□ 0.95
EFR3A-201ENST00000254624 KDM5AP29375 1690 aaKnown RBP20.98■□□□□ 0.95
EFR3A-201ENST00000254624 C16orf71Q8IYS4 520 aaPredicted RBP20.98■□□□□ 0.95
EFR3A-201ENST00000254624 ZMYM4Q5VZL5 1548 aa20.98■□□□□ 0.95
EFR3A-201ENST00000254624 SH3TC1Q8TE82 1336 aa20.98■□□□□ 0.95
EFR3A-201ENST00000254624 EFCAB6Q5THR3 1501 aa20.97■□□□□ 0.95
EFR3A-201ENST00000254624 CETN1Q12798 172 aa20.97■□□□□ 0.95
EFR3A-201ENST00000254624 SLC4A8Q2Y0W8 1093 aa20.97■□□□□ 0.95
EFR3A-201ENST00000254624 SNX21Q969T3 373 aa20.97■□□□□ 0.95
EFR3A-201ENST00000254624 BRPF3Q9ULD4 1205 aa20.97■□□□□ 0.95
EFR3A-201ENST00000254624 PLEKHG1Q9ULL1 1385 aa20.97■□□□□ 0.95
EFR3A-201ENST00000254624 F8W031 263 aaPredicted RBP20.97■□□□□ 0.95
EFR3A-201ENST00000254624 LDHBP07195 334 aaKnown RBP20.97■□□□□ 0.95
EFR3A-201ENST00000254624 CNBD1Q8NA66 436 aa20.97■□□□□ 0.95
EFR3A-201ENST00000254624 HELLSQ9NRZ9 838 aa20.97■□□□□ 0.95
EFR3A-201ENST00000254624 SBNO2Q9Y2G9 1366 aa20.97■□□□□ 0.95
EFR3A-201ENST00000254624 ZBTB7BO15156 539 aaPredicted RBP20.97■□□□□ 0.95
EFR3A-201ENST00000254624 PRC1O43663 620 aa20.97■□□□□ 0.95
EFR3A-201ENST00000254624 KCNG4Q8TDN1 519 aa20.97■□□□□ 0.95
EFR3A-201ENST00000254624 MLH3Q9UHC1 1453 aa20.97■□□□□ 0.95
EFR3A-201ENST00000254624 EYA2O00167 538 aa20.96■□□□□ 0.95
EFR3A-201ENST00000254624 LTKP29376 864 aa20.96■□□□□ 0.95
EFR3A-201ENST00000254624 RMND1Q9NWS8 449 aa20.96■□□□□ 0.95
EFR3A-201ENST00000254624 PDE8AO60658 829 aa20.96■□□□□ 0.95
EFR3A-201ENST00000254624 RAB11FIP4Q86YS3 637 aa20.96■□□□□ 0.95
EFR3A-201ENST00000254624 MAGEB6Q8N7X4 407 aa20.96■□□□□ 0.95
EFR3A-201ENST00000254624 MPNDQ8N594 471 aa20.96■□□□□ 0.95
EFR3A-201ENST00000254624 PICALMQ13492 652 aa20.96■□□□□ 0.95
EFR3A-201ENST00000254624 JDP2Q8WYK2 163 aa20.96■□□□□ 0.95
EFR3A-201ENST00000254624 CKAP2LQ8IYA6 745 aa20.95■□□□□ 0.95
EFR3A-201ENST00000254624 CCDC171Q6TFL3 1326 aa20.95■□□□□ 0.94
EFR3A-201ENST00000254624 SAMD9LQ8IVG5 1584 aa20.95■□□□□ 0.94
EFR3A-201ENST00000254624 NEMFO60524 1076 aa20.95■□□□□ 0.94
EFR3A-201ENST00000254624 PLEKHM2Q8IWE5 1019 aa20.95■□□□□ 0.94
EFR3A-201ENST00000254624 TNNQ9UQP3 1299 aa20.95■□□□□ 0.94
EFR3A-201ENST00000254624 ERVV-2B6SEH9 535 aa20.95■□□□□ 0.94
EFR3A-201ENST00000254624 TRIM35Q9UPQ4 493 aa20.95■□□□□ 0.94
EFR3A-201ENST00000254624 CCDC87Q9NVE4 849 aa20.95■□□□□ 0.94
EFR3A-201ENST00000254624 NECAB1Q8N987 351 aa20.95■□□□□ 0.94
EFR3A-201ENST00000254624 STK32BQ9NY57 414 aa20.95■□□□□ 0.94
EFR3A-201ENST00000254624 HELBQ8NG08 1087 aaPredicted RBP20.94■□□□□ 0.94
EFR3A-201ENST00000254624 YEATS4O95619 227 aa20.94■□□□□ 0.94
EFR3A-201ENST00000254624 G2E3Q7L622 706 aa20.94■□□□□ 0.94
EFR3A-201ENST00000254624 AOX1Q06278 1338 aa20.94■□□□□ 0.94
EFR3A-201ENST00000254624 PAXIP1Q6ZW49 1069 aaPredicted RBP20.94■□□□□ 0.94
EFR3A-201ENST00000254624 CLIP2Q9UDT6 1046 aa20.94■□□□□ 0.94
EFR3A-201ENST00000254624 AXDND1Q5T1B0 1012 aaPredicted RBP20.93■□□□□ 0.94
EFR3A-201ENST00000254624 LGR6Q9HBX8 967 aa20.93■□□□□ 0.94
EFR3A-201ENST00000254624 KIAA0232Q92628 1395 aa20.93■□□□□ 0.94
EFR3A-201ENST00000254624 PUM3Q15397 648 aaKnown RBP20.93■□□□□ 0.94
EFR3A-201ENST00000254624 MCM9Q9NXL9 1143 aa20.93■□□□□ 0.94
EFR3A-201ENST00000254624 EIF3JO75822 258 aaKnown RBP20.93■□□□□ 0.94
EFR3A-201ENST00000254624 IDEP14735 1019 aa20.93■□□□□ 0.94
EFR3A-201ENST00000254624 ITGA6P23229 1130 aa20.93■□□□□ 0.94
EFR3A-201ENST00000254624 CALML3P27482 149 aa20.93■□□□□ 0.94
EFR3A-201ENST00000254624 MTIF2P46199 727 aaKnown RBP20.93■□□□□ 0.94
EFR3A-201ENST00000254624 CREB3L3Q68CJ9 461 aa20.93■□□□□ 0.94
EFR3A-201ENST00000254624 ZSCAN30Q86W11 494 aa20.93■□□□□ 0.94
EFR3A-201ENST00000254624 GSDMDP57764 484 aa20.92■□□□□ 0.94
EFR3A-201ENST00000254624 ESPNB1AK53 854 aa20.92■□□□□ 0.94
EFR3A-201ENST00000254624 LRRC2Q9BYS8 371 aa20.92■□□□□ 0.94
EFR3A-201ENST00000254624 C6orf50Q9HD87 102 aa20.92■□□□□ 0.94
EFR3A-201ENST00000254624 CWC15Q9P013 229 aaKnown RBP20.92■□□□□ 0.94
EFR3A-201ENST00000254624 CHMLP26374 656 aa20.92■□□□□ 0.94
EFR3A-201ENST00000254624 HEATR3Q7Z4Q2 680 aa20.92■□□□□ 0.94
EFR3A-201ENST00000254624 FAM89AQ96GI7 184 aa20.92■□□□□ 0.94
EFR3A-201ENST00000254624 SAMM50Q9Y512 469 aa20.92■□□□□ 0.94
EFR3A-201ENST00000254624 KIF5CO60282 957 aa20.91■□□□□ 0.94
EFR3A-201ENST00000254624 NF2P35240 595 aa20.91■□□□□ 0.94
EFR3A-201ENST00000254624 KLHL40Q2TBA0 621 aa20.91■□□□□ 0.94
EFR3A-201ENST00000254624 UVSSAQ2YD98 709 aa20.91■□□□□ 0.94
EFR3A-201ENST00000254624 CCDC40Q4G0X9 1142 aa20.91■□□□□ 0.94
EFR3A-201ENST00000254624 NUP88Q99567 741 aaPredicted RBP20.91■□□□□ 0.94
EFR3A-201ENST00000254624 GDPD2Q9HCC8 539 aa20.91■□□□□ 0.94
EFR3A-201ENST00000254624 FAM135BQ49AJ0 1406 aa20.91■□□□□ 0.94
EFR3A-201ENST00000254624 PATL2C9JE40 543 aaKnown RBP20.91■□□□□ 0.94
EFR3A-201ENST00000254624 TBCAO75347 108 aaKnown RBP20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 275.7 ms