RNA–Protein interactions for RNA: ENST00000253048.9

ZC3H4-201, Transcript of zinc finger CCCH-type containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ZC3H4, Length 6,119 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4-201ENST00000253048 CCDC172P0C7W6 258 aa16.42■□□□□ 0.22
ZC3H4-201ENST00000253048 CNNM3Q8NE01 707 aa16.42■□□□□ 0.22
ZC3H4-201ENST00000253048 EXOC1Q9NV70 894 aa16.42■□□□□ 0.22
ZC3H4-201ENST00000253048 ZMYM3Q14202 1370 aa16.42■□□□□ 0.22
ZC3H4-201ENST00000253048 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.42■□□□□ 0.22
ZC3H4-201ENST00000253048 GNAT2P19087 354 aa16.42■□□□□ 0.22
ZC3H4-201ENST00000253048 ARL1P40616 181 aaPredicted RBP16.42■□□□□ 0.22
ZC3H4-201ENST00000253048 LMBR1LQ6UX01 489 aa16.42■□□□□ 0.22
ZC3H4-201ENST00000253048 USP48Q86UV5 1035 aa16.42■□□□□ 0.22
ZC3H4-201ENST00000253048 KCNA6P17658 529 aa16.41■□□□□ 0.22
ZC3H4-201ENST00000253048 SH2B1Q9NRF2 756 aaPredicted RBP16.41■□□□□ 0.22
ZC3H4-201ENST00000253048 TEX11Q8IYF3 940 aa16.41■□□□□ 0.22
ZC3H4-201ENST00000253048 DENND2AQ9ULE3 1009 aa16.41■□□□□ 0.22
ZC3H4-201ENST00000253048 NBPF3Q9H094 633 aa16.41■□□□□ 0.22
ZC3H4-201ENST00000253048 FERP16591 822 aa16.41■□□□□ 0.22
ZC3H4-201ENST00000253048 TAF3Q5VWG9 929 aa16.41■□□□□ 0.22
ZC3H4-201ENST00000253048 SULF1Q8IWU6 871 aa16.41■□□□□ 0.22
ZC3H4-201ENST00000253048 DLGAP5Q15398 846 aa16.41■□□□□ 0.22
ZC3H4-201ENST00000253048 ABT1Q9ULW3 272 aaKnown RBP16.41■□□□□ 0.22
ZC3H4-201ENST00000253048 PPM1EQ8WY54 764 aa16.4■□□□□ 0.22
ZC3H4-201ENST00000253048 TRIM6Q9C030 488 aaPredicted RBP16.4■□□□□ 0.22
ZC3H4-201ENST00000253048 SAP30BPQ9UHR5 308 aaKnown RBP16.4■□□□□ 0.22
ZC3H4-201ENST00000253048 CIZ1Q9ULV3 898 aaPredicted RBP16.4■□□□□ 0.22
ZC3H4-201ENST00000253048 ERLIN1O75477 346 aa16.4■□□□□ 0.22
ZC3H4-201ENST00000253048 FAM193AP78312 1265 aa16.4■□□□□ 0.22
ZC3H4-201ENST00000253048 RAB11FIP4Q86YS3 637 aa16.4■□□□□ 0.22
ZC3H4-201ENST00000253048 DDX23Q9BUQ8 820 aaKnown RBP16.4■□□□□ 0.22
ZC3H4-201ENST00000253048 GOPCQ9HD26 462 aa16.4■□□□□ 0.22
ZC3H4-201ENST00000253048 ZNF608Q9ULD9 1512 aaPredicted RBP16.4■□□□□ 0.22
ZC3H4-201ENST00000253048 ANKRD36BQ8N2N9 1353 aa16.4■□□□□ 0.22
ZC3H4-201ENST00000253048 MCM5P33992 734 aa16.39■□□□□ 0.22
ZC3H4-201ENST00000253048 SLC9C2Q5TAH2 1124 aa16.39■□□□□ 0.22
ZC3H4-201ENST00000253048 HELBQ8NG08 1087 aaPredicted RBP16.39■□□□□ 0.22
ZC3H4-201ENST00000253048 AS3MTQ9HBK9 375 aa16.39■□□□□ 0.22
ZC3H4-201ENST00000253048 TRPM2O94759 1503 aa16.39■□□□□ 0.22
ZC3H4-201ENST00000253048 FAM13AO94988 1023 aa16.39■□□□□ 0.21
ZC3H4-201ENST00000253048 URB2Q14146 1524 aaKnown RBP16.39■□□□□ 0.21
ZC3H4-201ENST00000253048 FAM47CQ5HY64 1035 aa16.39■□□□□ 0.21
ZC3H4-201ENST00000253048 FERMT3Q86UX7 667 aa16.39■□□□□ 0.21
ZC3H4-201ENST00000253048 ARHGEF10O15013 1369 aa16.39■□□□□ 0.21
ZC3H4-201ENST00000253048 PABPC4Q13310 644 aaKnown RBP eCLIP16.39■□□□□ 0.21
ZC3H4-201ENST00000253048 ZYXQ15942 572 aaKnown RBP16.39■□□□□ 0.21
ZC3H4-201ENST00000253048 MSANTD4Q8NCY6 345 aa16.39■□□□□ 0.21
ZC3H4-201ENST00000253048 FAM83GA6ND36 823 aa16.38■□□□□ 0.21
ZC3H4-201ENST00000253048 USO1O60763 962 aaKnown RBP16.38■□□□□ 0.21
ZC3H4-201ENST00000253048 NUP88Q99567 741 aaPredicted RBP16.38■□□□□ 0.21
ZC3H4-201ENST00000253048 PKD2L1Q9P0L9 805 aa16.38■□□□□ 0.21
ZC3H4-201ENST00000253048 SCAF11Q99590 1463 aaKnown RBP16.38■□□□□ 0.21
ZC3H4-201ENST00000253048 TNFAIP1Q13829 316 aa16.38■□□□□ 0.21
ZC3H4-201ENST00000253048 RTN1Q16799 776 aa16.38■□□□□ 0.21
ZC3H4-201ENST00000253048 C2CD5Q86YS7 1000 aa16.38■□□□□ 0.21
ZC3H4-201ENST00000253048 MAGEB6Q8N7X4 407 aa16.38■□□□□ 0.21
ZC3H4-201ENST00000253048 ALS2CR12Q96Q35 445 aa16.38■□□□□ 0.21
ZC3H4-201ENST00000253048 NACA2Q9H009 215 aa16.38■□□□□ 0.21
ZC3H4-201ENST00000253048 CCDC113Q9H0I3 377 aa16.38■□□□□ 0.21
ZC3H4-201ENST00000253048 MPNDQ8N594 471 aa16.38■□□□□ 0.21
ZC3H4-201ENST00000253048 MRVI1Q9Y6F6 885 aa16.38■□□□□ 0.21
ZC3H4-201ENST00000253048 KIAA0754O94854 1291 aa16.38■□□□□ 0.21
ZC3H4-201ENST00000253048 GINS2Q9Y248 185 aa16.38■□□□□ 0.21
ZC3H4-201ENST00000253048 RTL9Q8NET4 1388 aa16.37■□□□□ 0.21
ZC3H4-201ENST00000253048 PTPDC1A2A3K4 754 aa16.37■□□□□ 0.21
ZC3H4-201ENST00000253048 HIBADHP31937 336 aaKnown RBP16.37■□□□□ 0.21
ZC3H4-201ENST00000253048 PRIM1P49642 420 aaKnown RBP16.37■□□□□ 0.21
ZC3H4-201ENST00000253048 KSR2Q6VAB6 950 aa16.37■□□□□ 0.21
ZC3H4-201ENST00000253048 MIGA1Q8NAN2 632 aa16.37■□□□□ 0.21
ZC3H4-201ENST00000253048 DYDC1Q8WWB3 177 aa16.37■□□□□ 0.21
ZC3H4-201ENST00000253048 TAOK3Q9H2K8 898 aa16.37■□□□□ 0.21
ZC3H4-201ENST00000253048 DNA2P51530 1060 aa16.37■□□□□ 0.21
ZC3H4-201ENST00000253048 SLC8A3P57103 927 aa16.37■□□□□ 0.21
ZC3H4-201ENST00000253048 LUZP1Q86V48 1076 aa16.37■□□□□ 0.21
ZC3H4-201ENST00000253048 YEATS4O95619 227 aa16.36■□□□□ 0.21
ZC3H4-201ENST00000253048 SSH1Q8WYL5 1049 aa16.36■□□□□ 0.21
ZC3H4-201ENST00000253048 GRM8O00222 908 aa16.36■□□□□ 0.21
ZC3H4-201ENST00000253048 LEKR1Q6ZMV7 388 aa16.36■□□□□ 0.21
ZC3H4-201ENST00000253048 AZI2Q9H6S1 392 aa16.36■□□□□ 0.21
ZC3H4-201ENST00000253048 ORC3Q9UBD5 711 aaPredicted RBP16.36■□□□□ 0.21
ZC3H4-201ENST00000253048 ZBTB43O43298 467 aa16.36■□□□□ 0.21
ZC3H4-201ENST00000253048 DHX37Q8IY37 1157 aaKnown RBP16.36■□□□□ 0.21
ZC3H4-201ENST00000253048 TMCO5BA8MYB1 307 aa16.36■□□□□ 0.21
ZC3H4-201ENST00000253048 ALDH1L1O75891 902 aa16.36■□□□□ 0.21
ZC3H4-201ENST00000253048 NEK1Q96PY6 1258 aa16.36■□□□□ 0.21
ZC3H4-201ENST00000253048 GADL1Q6ZQY3 521 aa16.36■□□□□ 0.21
ZC3H4-201ENST00000253048 GOLGA1Q92805 767 aa16.36■□□□□ 0.21
ZC3H4-201ENST00000253048 MBIPQ9NS73 344 aa16.36■□□□□ 0.21
ZC3H4-201ENST00000253048 CAMK4Q16566 473 aa16.35■□□□□ 0.21
ZC3H4-201ENST00000253048 TTC12Q9H892 705 aaPredicted RBP16.35■□□□□ 0.21
ZC3H4-201ENST00000253048 MAP3K11Q16584 847 aa16.35■□□□□ 0.21
ZC3H4-201ENST00000253048 AKNAD1Q5T1N1 836 aa16.35■□□□□ 0.21
ZC3H4-201ENST00000253048 PARP1P09874 1014 aaKnown RBP16.35■□□□□ 0.21
ZC3H4-201ENST00000253048 CEP63Q96MT8 703 aa16.35■□□□□ 0.21
ZC3H4-201ENST00000253048 HACE1Q8IYU2 909 aa16.35■□□□□ 0.21
ZC3H4-201ENST00000253048 PAGR1Q9BTK6 254 aa16.35■□□□□ 0.21
ZC3H4-201ENST00000253048 SLU7O95391 586 aaKnown RBP16.35■□□□□ 0.21
ZC3H4-201ENST00000253048 RSPH6AQ9H0K4 717 aa16.35■□□□□ 0.21
ZC3H4-201ENST00000253048 NR1I2O75469 434 aa16.34■□□□□ 0.21
ZC3H4-201ENST00000253048 NAP1L4Q99733 375 aaKnown RBP16.34■□□□□ 0.21
ZC3H4-201ENST00000253048 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.34■□□□□ 0.21
ZC3H4-201ENST00000253048 RMND1Q9NWS8 449 aa16.34■□□□□ 0.21
ZC3H4-201ENST00000253048 HMG20BQ9P0W2 317 aa16.34■□□□□ 0.21
ZC3H4-201ENST00000253048 FLT4P35916 1363 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms