RNA–Protein interactions for RNA: ENST00000243103.3

HOXC12-201, Transcript of homeobox C12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC12, Length 3,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12-201ENST00000243103 FAM227BQ96M60 508 aa17.41■□□□□ 0.38
HOXC12-201ENST00000243103 CLSTN2Q9H4D0 955 aa17.41■□□□□ 0.38
HOXC12-201ENST00000243103 GNAI3P08754 354 aa17.41■□□□□ 0.38
HOXC12-201ENST00000243103 FBXW10Q5XX13 1052 aa17.41■□□□□ 0.38
HOXC12-201ENST00000243103 EFCC1Q9HA90 598 aa17.41■□□□□ 0.38
HOXC12-201ENST00000243103 PTCH1Q13635 1447 aa17.41■□□□□ 0.38
HOXC12-201ENST00000243103 SSBP05455 408 aaKnown RBP eCLIP17.41■□□□□ 0.38
HOXC12-201ENST00000243103 FAM107BQ9H098 131 aa17.41■□□□□ 0.38
HOXC12-201ENST00000243103 HYPKQ9NX55 129 aa17.41■□□□□ 0.38
HOXC12-201ENST00000243103 QRICH2Q9H0J4 1663 aa17.4■□□□□ 0.38
HOXC12-201ENST00000243103 SBNO2Q9Y2G9 1366 aa17.4■□□□□ 0.38
HOXC12-201ENST00000243103 AKAP17AQ02040 695 aaKnown RBP17.4■□□□□ 0.38
HOXC12-201ENST00000243103 NCBP3Q53F19 620 aaKnown RBP17.4■□□□□ 0.38
HOXC12-201ENST00000243103 DDX19AQ9NUU7 478 aaKnown RBP17.4■□□□□ 0.38
HOXC12-201ENST00000243103 RAI14Q9P0K7 980 aa17.4■□□□□ 0.38
HOXC12-201ENST00000243103 PPP2R5AQ15172 486 aa17.4■□□□□ 0.38
HOXC12-201ENST00000243103 NYAP1Q6ZVC0 841 aa17.4■□□□□ 0.38
HOXC12-201ENST00000243103 RGS12O14924 1447 aa17.39■□□□□ 0.38
HOXC12-201ENST00000243103 MRPS25P82663 173 aaKnown RBP17.39■□□□□ 0.38
HOXC12-201ENST00000243103 PROSER3Q2NL68 480 aa17.39■□□□□ 0.38
HOXC12-201ENST00000243103 DPCR1Q3MIW9 517 aa17.39■□□□□ 0.38
HOXC12-201ENST00000243103 IL17REQ8NFR9 667 aa17.39■□□□□ 0.38
HOXC12-201ENST00000243103 RIN2Q8WYP3 895 aaPredicted RBP17.39■□□□□ 0.38
HOXC12-201ENST00000243103 LRRC7Q96NW7 1537 aa17.39■□□□□ 0.37
HOXC12-201ENST00000243103 KIF1BO60333 1816 aa17.39■□□□□ 0.37
HOXC12-201ENST00000243103 CHL1O00533 1208 aa17.39■□□□□ 0.37
HOXC12-201ENST00000243103 TBC1D8O95759 1140 aa17.39■□□□□ 0.37
HOXC12-201ENST00000243103 ZNF853P0CG23 659 aa17.39■□□□□ 0.37
HOXC12-201ENST00000243103 H2AFXP16104 143 aaPredicted RBP17.39■□□□□ 0.37
HOXC12-201ENST00000243103 TMEM87AQ8NBN3 555 aa17.39■□□□□ 0.37
HOXC12-201ENST00000243103 ADKP55263 362 aaKnown RBP17.39■□□□□ 0.37
HOXC12-201ENST00000243103 ARMCX5Q6P1M9 558 aa17.39■□□□□ 0.37
HOXC12-201ENST00000243103 GPIHBP1Q8IV16 184 aa17.39■□□□□ 0.37
HOXC12-201ENST00000243103 TDRD7Q8NHU6 1098 aaKnown RBP17.39■□□□□ 0.37
HOXC12-201ENST00000243103 WDR24Q96S15 920 aa17.39■□□□□ 0.37
HOXC12-201ENST00000243103 SCAND2PQ9GZW5 306 aaPredicted RBP17.39■□□□□ 0.37
HOXC12-201ENST00000243103 NCOA5Q9HCD5 579 aaKnown RBP17.39■□□□□ 0.37
HOXC12-201ENST00000243103 ATP5J2-PTCD1G3V325 749 aa17.38■□□□□ 0.37
HOXC12-201ENST00000243103 PTCD1O75127 700 aaKnown RBP17.38■□□□□ 0.37
HOXC12-201ENST00000243103 TDO2P48775 406 aa17.38■□□□□ 0.37
HOXC12-201ENST00000243103 BLOC1S2Q6QNY1 142 aa17.38■□□□□ 0.37
HOXC12-201ENST00000243103 CNTROBQ8N137 903 aa17.38■□□□□ 0.37
HOXC12-201ENST00000243103 ATP10DQ9P241 1426 aa17.38■□□□□ 0.37
HOXC12-201ENST00000243103 SOS1Q07889 1333 aaPredicted RBP17.38■□□□□ 0.37
HOXC12-201ENST00000243103 ATP2B1P20020 1258 aa17.38■□□□□ 0.37
HOXC12-201ENST00000243103 ACTN2P35609 894 aa17.38■□□□□ 0.37
HOXC12-201ENST00000243103 STX1AQ16623 288 aa17.38■□□□□ 0.37
HOXC12-201ENST00000243103 FBXO18Q8NFZ0 1043 aa17.38■□□□□ 0.37
HOXC12-201ENST00000243103 CABLES1Q8TDN4 633 aa17.38■□□□□ 0.37
HOXC12-201ENST00000243103 LONRF2Q1L5Z9 754 aa17.37■□□□□ 0.37
HOXC12-201ENST00000243103 CC2D1AQ6P1N0 951 aaPredicted RBP17.37■□□□□ 0.37
HOXC12-201ENST00000243103 EFCAB6Q5THR3 1501 aa17.37■□□□□ 0.37
HOXC12-201ENST00000243103 PSME1Q06323 249 aa17.37■□□□□ 0.37
HOXC12-201ENST00000243103 SYCP1Q15431 976 aa17.37■□□□□ 0.37
HOXC12-201ENST00000243103 AACSQ86V21 672 aa17.37■□□□□ 0.37
HOXC12-201ENST00000243103 RBM8AQ9Y5S9 174 aaKnown RBP17.37■□□□□ 0.37
HOXC12-201ENST00000243103 PIK3R4Q99570 1358 aa17.37■□□□□ 0.37
HOXC12-201ENST00000243103 GLI2P10070 1586 aa17.37■□□□□ 0.37
HOXC12-201ENST00000243103 ATP2C2O75185 946 aa17.37■□□□□ 0.37
HOXC12-201ENST00000243103 ETF1P62495 437 aaKnown RBP17.37■□□□□ 0.37
HOXC12-201ENST00000243103 JAKMIP3Q5VZ66 844 aa17.37■□□□□ 0.37
HOXC12-201ENST00000243103 NCAPGQ9BPX3 1015 aa17.37■□□□□ 0.37
HOXC12-201ENST00000243103 NPHP3Q7Z494 1330 aa17.36■□□□□ 0.37
HOXC12-201ENST00000243103 CSB-PGBD3P0DP91 1061 aa17.36■□□□□ 0.37
HOXC12-201ENST00000243103 ZNF530Q6P9A1 599 aaPredicted RBP17.36■□□□□ 0.37
HOXC12-201ENST00000243103 JPH2Q9BR39 696 aaPredicted RBP17.36■□□□□ 0.37
HOXC12-201ENST00000243103 SAMM50Q9Y512 469 aa17.36■□□□□ 0.37
HOXC12-201ENST00000243103 MARCKSP29966 332 aaPredicted RBP17.36■□□□□ 0.37
HOXC12-201ENST00000243103 MAP2K2P36507 400 aa17.36■□□□□ 0.37
HOXC12-201ENST00000243103 ANKRD20A12PQ8NF67 263 aa17.36■□□□□ 0.37
HOXC12-201ENST00000243103 GJB4Q9NTQ9 266 aa17.36■□□□□ 0.37
HOXC12-201ENST00000243103 GOLGA5Q8TBA6 731 aa17.36■□□□□ 0.37
HOXC12-201ENST00000243103 DHX58Q96C10 678 aa17.36■□□□□ 0.37
HOXC12-201ENST00000243103 GOLPH3LQ9H4A5 285 aa17.36■□□□□ 0.37
HOXC12-201ENST00000243103 GNAT3A8MTJ3 354 aa17.35■□□□□ 0.37
HOXC12-201ENST00000243103 SGSM2O43147 1006 aa17.35■□□□□ 0.37
HOXC12-201ENST00000243103 SLC20A2Q08357 652 aa17.35■□□□□ 0.37
HOXC12-201ENST00000243103 PLEKHO1Q53GL0 409 aaPredicted RBP17.35■□□□□ 0.37
HOXC12-201ENST00000243103 REXO1L1PQ8IX06 675 aa17.35■□□□□ 0.37
HOXC12-201ENST00000243103 USP44Q9H0E7 712 aa17.35■□□□□ 0.37
HOXC12-201ENST00000243103 OSBPL3Q9H4L5 887 aa17.35■□□□□ 0.37
HOXC12-201ENST00000243103 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.35■□□□□ 0.37
HOXC12-201ENST00000243103 TET3O43151 1660 aa17.35■□□□□ 0.37
HOXC12-201ENST00000243103 CAMSAP1Q5T5Y3 1602 aa17.35■□□□□ 0.37
HOXC12-201ENST00000243103 CCDC129Q6ZRS4 1044 aa17.35■□□□□ 0.37
HOXC12-201ENST00000243103 FSD1Q9BTV5 496 aa17.35■□□□□ 0.37
HOXC12-201ENST00000243103 SHROOM2Q13796 1616 aa17.35■□□□□ 0.37
HOXC12-201ENST00000243103 NSD2O96028 1365 aa17.34■□□□□ 0.37
HOXC12-201ENST00000243103 TMEM232C9JQI7 657 aa17.34■□□□□ 0.37
HOXC12-201ENST00000243103 ST3GAL1Q11201 340 aa17.34■□□□□ 0.37
HOXC12-201ENST00000243103 CNNM3Q8NE01 707 aa17.34■□□□□ 0.37
HOXC12-201ENST00000243103 EHD4Q9H223 541 aa17.34■□□□□ 0.37
HOXC12-201ENST00000243103 ANO10Q9NW15 660 aa17.34■□□□□ 0.37
HOXC12-201ENST00000243103 KAT6BQ8WYB5 2073 aa17.34■□□□□ 0.37
HOXC12-201ENST00000243103 PES1O00541 588 aaKnown RBP17.34■□□□□ 0.37
HOXC12-201ENST00000243103 COBLO75128 1261 aa17.34■□□□□ 0.37
HOXC12-201ENST00000243103 WDHD1O75717 1129 aaPredicted RBP17.34■□□□□ 0.37
HOXC12-201ENST00000243103 GUCY2CP25092 1073 aa17.34■□□□□ 0.37
HOXC12-201ENST00000243103 KIF4BQ2VIQ3 1234 aa17.34■□□□□ 0.37
HOXC12-201ENST00000243103 NEUROD6Q96NK8 337 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms