RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 PNMA6EA0A0J9YXQ4 647 aa16.23■□□□□ 0.19
SLIRP-201ENST00000238688 DDNO94850 711 aaPredicted RBP16.23■□□□□ 0.19
SLIRP-201ENST00000238688 APLP1P51693 650 aa16.23■□□□□ 0.19
SLIRP-201ENST00000238688 TCIRG1Q13488 830 aa16.23■□□□□ 0.19
SLIRP-201ENST00000238688 CWF19L2Q2TBE0 894 aaKnown RBP16.23■□□□□ 0.19
SLIRP-201ENST00000238688 RABL6Q3YEC7 729 aaPredicted RBP16.23■□□□□ 0.19
SLIRP-201ENST00000238688 NLRP10Q86W26 655 aa16.23■□□□□ 0.19
SLIRP-201ENST00000238688 C16orf71Q8IYS4 520 aaPredicted RBP16.23■□□□□ 0.19
SLIRP-201ENST00000238688 ZNF277Q9NRM2 450 aaPredicted RBP16.23■□□□□ 0.19
SLIRP-201ENST00000238688 SCN4AP35499 1836 aa16.23■□□□□ 0.19
SLIRP-201ENST00000238688 MYH3P11055 1940 aa16.23■□□□□ 0.19
SLIRP-201ENST00000238688 DPY19L2Q6NUT2 758 aa16.22■□□□□ 0.19
SLIRP-201ENST00000238688 PLEKHM2Q8IWE5 1019 aa16.22■□□□□ 0.19
SLIRP-201ENST00000238688 DDRGK1Q96HY6 314 aa16.22■□□□□ 0.19
SLIRP-201ENST00000238688 CRAMP1Q96RY5 1269 aa16.22■□□□□ 0.19
SLIRP-201ENST00000238688 ISCA1Q9BUE6 129 aa16.22■□□□□ 0.19
SLIRP-201ENST00000238688 UTP14AQ9BVJ6 771 aaKnown RBP16.22■□□□□ 0.19
SLIRP-201ENST00000238688 H7C1W4 665 aa16.21■□□□□ 0.19
SLIRP-201ENST00000238688 HSP90B1P14625 803 aaKnown RBP16.21■□□□□ 0.19
SLIRP-201ENST00000238688 HTRA3P83110 453 aa16.21■□□□□ 0.19
SLIRP-201ENST00000238688 RTKN2Q8IZC4 609 aa16.21■□□□□ 0.19
SLIRP-201ENST00000238688 STAP2Q9UGK3 403 aa16.21■□□□□ 0.19
SLIRP-201ENST00000238688 FBXO3Q9UK99 471 aa16.21■□□□□ 0.19
SLIRP-201ENST00000238688 ZNF541Q9H0D2 1346 aa16.2■□□□□ 0.18
SLIRP-201ENST00000238688 SKAP1Q86WV1 359 aa16.2■□□□□ 0.18
SLIRP-201ENST00000238688 SMC1BQ8NDV3 1235 aa16.2■□□□□ 0.18
SLIRP-201ENST00000238688 RPGRQ92834 1020 aaKnown RBP16.2■□□□□ 0.18
SLIRP-201ENST00000238688 PSMD1Q99460 953 aa16.2■□□□□ 0.18
SLIRP-201ENST00000238688 SALL3Q9BXA9 1300 aa16.19■□□□□ 0.18
SLIRP-201ENST00000238688 AK9Q5TCS8 1911 aa16.19■□□□□ 0.18
SLIRP-201ENST00000238688 SURF6O75683 361 aaKnown RBP16.19■□□□□ 0.18
SLIRP-201ENST00000238688 IARSP41252 1262 aaKnown RBP16.19■□□□□ 0.18
SLIRP-201ENST00000238688 TTC22Q5TAA0 569 aa16.19■□□□□ 0.18
SLIRP-201ENST00000238688 CASC1Q6TDU7 716 aa16.19■□□□□ 0.18
SLIRP-201ENST00000238688 NLRP3Q96P20 1036 aa16.19■□□□□ 0.18
SLIRP-201ENST00000238688 PLA2G12BQ9BX93 195 aa16.19■□□□□ 0.18
SLIRP-201ENST00000238688 COPRSQ9NQ92 184 aa16.19■□□□□ 0.18
SLIRP-201ENST00000238688 CDHR2Q9BYE9 1310 aa16.19■□□□□ 0.18
SLIRP-201ENST00000238688 COL4A1P02462 1669 aa16.18■□□□□ 0.18
SLIRP-201ENST00000238688 FZD9O00144 591 aa16.18■□□□□ 0.18
SLIRP-201ENST00000238688 POTEIP0CG38 1075 aa16.18■□□□□ 0.18
SLIRP-201ENST00000238688 POTEJP0CG39 1038 aa16.18■□□□□ 0.18
SLIRP-201ENST00000238688 HCLS1P14317 486 aaPredicted RBP16.18■□□□□ 0.18
SLIRP-201ENST00000238688 CASP7P55210 303 aa16.18■□□□□ 0.18
SLIRP-201ENST00000238688 CC2D2BQ6DHV5 1058 aa16.18■□□□□ 0.18
SLIRP-201ENST00000238688 RHPN1Q8TCX5 695 aa16.18■□□□□ 0.18
SLIRP-201ENST00000238688 RBM17Q96I25 401 aaKnown RBP16.18■□□□□ 0.18
SLIRP-201ENST00000238688 GPATCH3Q96I76 525 aa16.18■□□□□ 0.18
SLIRP-201ENST00000238688 SUCLG2Q96I99 432 aa16.18■□□□□ 0.18
SLIRP-201ENST00000238688 L3MBTL3Q96JM7 780 aaPredicted RBP16.18■□□□□ 0.18
SLIRP-201ENST00000238688 BICC1Q9H694 974 aaKnown RBP16.18■□□□□ 0.18
SLIRP-201ENST00000238688 ADAMTSL1Q8N6G6 1762 aa16.18■□□□□ 0.18
SLIRP-201ENST00000238688 TTC41PQ6P2S7 1318 aa16.18■□□□□ 0.18
SLIRP-201ENST00000238688 CDC45O75419 566 aa16.17■□□□□ 0.18
SLIRP-201ENST00000238688 PCCAP05165 728 aaPredicted RBP16.17■□□□□ 0.18
SLIRP-201ENST00000238688 MX1P20591 662 aa16.17■□□□□ 0.18
SLIRP-201ENST00000238688 PDE1AP54750 535 aa16.17■□□□□ 0.18
SLIRP-201ENST00000238688 CLASRPQ8N2M8 674 aaKnown RBP16.17■□□□□ 0.18
SLIRP-201ENST00000238688 KAZALD1Q96I82 304 aa16.17■□□□□ 0.18
SLIRP-201ENST00000238688 EXOC6BQ9Y2D4 811 aa16.17■□□□□ 0.18
SLIRP-201ENST00000238688 PPEF1O14829 653 aaPredicted RBP16.16■□□□□ 0.18
SLIRP-201ENST00000238688 G3BP1Q13283 466 aaKnown RBP eCLIP16.16■□□□□ 0.18
SLIRP-201ENST00000238688 UBE3BQ7Z3V4 1068 aa16.16■□□□□ 0.18
SLIRP-201ENST00000238688 TICAM2Q86XR7 235 aa16.16■□□□□ 0.18
SLIRP-201ENST00000238688 IL27Q8NEV9 243 aa16.16■□□□□ 0.18
SLIRP-201ENST00000238688 TRMT112Q9UI30 125 aaKnown RBP16.16■□□□□ 0.18
SLIRP-201ENST00000238688 LRRC37AA6NMS7 1700 aa16.16■□□□□ 0.18
SLIRP-201ENST00000238688 LTBP1Q14766 1721 aa16.16■□□□□ 0.18
SLIRP-201ENST00000238688 SH3TC1Q8TE82 1336 aa16.16■□□□□ 0.18
SLIRP-201ENST00000238688 ATP5J2-PTCD1G3V325 749 aa16.15■□□□□ 0.18
SLIRP-201ENST00000238688 ERC2O15083 957 aa16.15■□□□□ 0.18
SLIRP-201ENST00000238688 EPB41L2O43491 1005 aaKnown RBP16.15■□□□□ 0.18
SLIRP-201ENST00000238688 ZBTB38Q8NAP3 1195 aaPredicted RBP16.15■□□□□ 0.18
SLIRP-201ENST00000238688 ATP6V0A2Q9Y487 856 aa16.15■□□□□ 0.18
SLIRP-201ENST00000238688 OS9Q13438 667 aaPredicted RBP16.14■□□□□ 0.17
SLIRP-201ENST00000238688 IPO9Q96P70 1041 aaKnown RBP16.14■□□□□ 0.17
SLIRP-201ENST00000238688 TAF1DQ9H5J8 278 aaPredicted RBP16.14■□□□□ 0.17
SLIRP-201ENST00000238688 DUOX1Q9NRD9 1551 aa16.13■□□□□ 0.17
SLIRP-201ENST00000238688 GRIPAP1Q4V328 841 aa16.13■□□□□ 0.17
SLIRP-201ENST00000238688 FAM89AQ96GI7 184 aa16.13■□□□□ 0.17
SLIRP-201ENST00000238688 BBOX1O75936 387 aa16.12■□□□□ 0.17
SLIRP-201ENST00000238688 CIAO1O76071 339 aa16.12■□□□□ 0.17
SLIRP-201ENST00000238688 SP8Q8IXZ3 490 aa16.12■□□□□ 0.17
SLIRP-201ENST00000238688 KLRG1Q96E93 195 aa16.12■□□□□ 0.17
SLIRP-201ENST00000238688 TBC1D32Q96NH3 1257 aa16.12■□□□□ 0.17
SLIRP-201ENST00000238688 RTFDC1Q9BY42 306 aaPredicted RBP16.12■□□□□ 0.17
SLIRP-201ENST00000238688 GPR108Q9NPR9 543 aa16.12■□□□□ 0.17
SLIRP-201ENST00000238688 GLRX3O76003 335 aaKnown RBP16.11■□□□□ 0.17
SLIRP-201ENST00000238688 GRAPQ13588 217 aa16.11■□□□□ 0.17
SLIRP-201ENST00000238688 SF3B3Q15393 1217 aaKnown RBP16.11■□□□□ 0.17
SLIRP-201ENST00000238688 CHADLQ6NUI6 762 aa16.11■□□□□ 0.17
SLIRP-201ENST00000238688 GRAPLQ8TC17 118 aaPredicted RBP16.11■□□□□ 0.17
SLIRP-201ENST00000238688 IQCA1LA6NCM1 817 aa16.1■□□□□ 0.17
SLIRP-201ENST00000238688 SMARCA5O60264 1052 aaPredicted RBP16.1■□□□□ 0.17
SLIRP-201ENST00000238688 GSPT1P15170 499 aaKnown RBP16.1■□□□□ 0.17
SLIRP-201ENST00000238688 RFX5P48382 616 aaPredicted RBP16.1■□□□□ 0.17
SLIRP-201ENST00000238688 FOXO4P98177 505 aa16.1■□□□□ 0.17
SLIRP-201ENST00000238688 GPC2Q8N158 579 aa16.1■□□□□ 0.17
SLIRP-201ENST00000238688 LARGE2Q8N3Y3 721 aa16.1■□□□□ 0.17
SLIRP-201ENST00000238688 JMYQ8N9B5 988 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms