RNA–Protein interactions for RNA: ENST00000235372.11

PRDM2-201, Transcript of PR/SET domain 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRDM2, Length 7,957 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-201ENST00000235372 PTPRGP23470 1445 aa8.52□□□□□ -1.04
PRDM2-201ENST00000235372 SETSIPP0DME0 302 aa8.52□□□□□ -1.05
PRDM2-201ENST00000235372 INPP1P49441 399 aa8.52□□□□□ -1.05
PRDM2-201ENST00000235372 CCDC170Q8IYT3 715 aa8.52□□□□□ -1.05
PRDM2-201ENST00000235372 SMARCC2Q8TAQ2 1214 aa8.52□□□□□ -1.05
PRDM2-201ENST00000235372 IVLP07476 585 aa8.52□□□□□ -1.05
PRDM2-201ENST00000235372 PPP1R21Q6ZMI0 780 aa8.52□□□□□ -1.05
PRDM2-201ENST00000235372 FMNL3Q8IVF7 1028 aa8.52□□□□□ -1.05
PRDM2-201ENST00000235372 TCP11L2Q8N4U5 519 aa8.52□□□□□ -1.05
PRDM2-201ENST00000235372 NGLY1Q96IV0 654 aa8.52□□□□□ -1.05
PRDM2-201ENST00000235372 KCNK9Q9NPC2 374 aa8.52□□□□□ -1.05
PRDM2-201ENST00000235372 PTCD1O75127 700 aaKnown RBP8.52□□□□□ -1.05
PRDM2-201ENST00000235372 CDR2Q01850 454 aa8.52□□□□□ -1.05
PRDM2-201ENST00000235372 CEP85LQ5SZL2 805 aa8.52□□□□□ -1.05
PRDM2-201ENST00000235372 SDCCAG8Q86SQ7 713 aaPredicted RBP8.52□□□□□ -1.05
PRDM2-201ENST00000235372 FSIP1Q8NA03 581 aa8.52□□□□□ -1.05
PRDM2-201ENST00000235372 ATRIPQ8WXE1 791 aa8.52□□□□□ -1.05
PRDM2-201ENST00000235372 ARID5AQ03989 594 aa8.52□□□□□ -1.05
PRDM2-201ENST00000235372 KANK4Q5T7N3 995 aaPredicted RBP8.52□□□□□ -1.05
PRDM2-201ENST00000235372 IL1RAPL2Q9NP60 686 aa8.52□□□□□ -1.05
PRDM2-201ENST00000235372 MTRF1LQ9UGC7 380 aaKnown RBP8.52□□□□□ -1.05
PRDM2-201ENST00000235372 SPDYE3A6NKU9 549 aa8.52□□□□□ -1.05
PRDM2-201ENST00000235372 GPR161Q8N6U8 529 aaKnown RBP8.52□□□□□ -1.05
PRDM2-201ENST00000235372 MYD88Q99836 296 aa8.52□□□□□ -1.05
PRDM2-201ENST00000235372 SPC25Q9HBM1 224 aa8.52□□□□□ -1.05
PRDM2-201ENST00000235372 RABGAP1Q9Y3P9 1069 aa8.52□□□□□ -1.05
PRDM2-201ENST00000235372 TDRD9Q8NDG6 1382 aaKnown RBP8.52□□□□□ -1.05
PRDM2-201ENST00000235372 GTF2A1P52655 376 aaPredicted RBP8.51□□□□□ -1.05
PRDM2-201ENST00000235372 TRPC3Q13507 836 aa8.51□□□□□ -1.05
PRDM2-201ENST00000235372 SLC4A8Q2Y0W8 1093 aa8.51□□□□□ -1.05
PRDM2-201ENST00000235372 PPP1R42Q7Z4L9 355 aa8.51□□□□□ -1.05
PRDM2-201ENST00000235372 ATP11AP98196 1134 aa8.51□□□□□ -1.05
PRDM2-201ENST00000235372 UAP1Q16222 522 aaPredicted RBP8.51□□□□□ -1.05
PRDM2-201ENST00000235372 MPRIPQ6WCQ1 1025 aa8.51□□□□□ -1.05
PRDM2-201ENST00000235372 N4BP3O15049 544 aa8.51□□□□□ -1.05
PRDM2-201ENST00000235372 MVPQ14764 893 aaKnown RBP8.51□□□□□ -1.05
PRDM2-201ENST00000235372 EP400NLQ6ZTU2 488 aa8.51□□□□□ -1.05
PRDM2-201ENST00000235372 KCNH5Q8NCM2 988 aa8.51□□□□□ -1.05
PRDM2-201ENST00000235372 HAUS8Q9BT25 410 aa8.51□□□□□ -1.05
PRDM2-201ENST00000235372 BOLA2Q9H3K6 86 aa8.51□□□□□ -1.05
PRDM2-201ENST00000235372 SAMD15Q9P1V8 674 aa8.51□□□□□ -1.05
PRDM2-201ENST00000235372 RAPGEF2Q9Y4G8 1499 aa8.51□□□□□ -1.05
PRDM2-201ENST00000235372 STX10O60499 249 aa8.51□□□□□ -1.05
PRDM2-201ENST00000235372 NUTM1Q86Y26 1132 aa8.51□□□□□ -1.05
PRDM2-201ENST00000235372 CACNA2D3Q8IZS8 1091 aa8.51□□□□□ -1.05
PRDM2-201ENST00000235372 CDK19Q9BWU1 502 aa8.51□□□□□ -1.05
PRDM2-201ENST00000235372 IARSP41252 1262 aaKnown RBP8.51□□□□□ -1.05
PRDM2-201ENST00000235372 LACTBP83111 547 aaPredicted RBP8.51□□□□□ -1.05
PRDM2-201ENST00000235372 FYB2Q5VWT5 728 aa8.51□□□□□ -1.05
PRDM2-201ENST00000235372 BANK1Q8NDB2 785 aa8.51□□□□□ -1.05
PRDM2-201ENST00000235372 KIFAP3Q92845 792 aa8.51□□□□□ -1.05
PRDM2-201ENST00000235372 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.51□□□□□ -1.05
PRDM2-201ENST00000235372 PRPF40BQ6NWY9 871 aaKnown RBP8.51□□□□□ -1.05
PRDM2-201ENST00000235372 MTUS1Q9ULD2 1270 aa8.51□□□□□ -1.05
PRDM2-201ENST00000235372 POLD1P28340 1107 aa8.51□□□□□ -1.05
PRDM2-201ENST00000235372 TMEM132EQ6IEE7 984 aa8.51□□□□□ -1.05
PRDM2-201ENST00000235372 INTS8Q75QN2 995 aaKnown RBP8.51□□□□□ -1.05
PRDM2-201ENST00000235372 IFT74Q96LB3 600 aa8.51□□□□□ -1.05
PRDM2-201ENST00000235372 PRAM1Q96QH2 718 aa8.51□□□□□ -1.05
PRDM2-201ENST00000235372 KAT6AQ92794 2004 aa8.5□□□□□ -1.05
PRDM2-201ENST00000235372 ZNF853P0CG23 659 aa8.5□□□□□ -1.05
PRDM2-201ENST00000235372 METAP2P50579 478 aaKnown RBP eCLIP8.5□□□□□ -1.05
PRDM2-201ENST00000235372 PPP2R5CQ13362 524 aa8.5□□□□□ -1.05
PRDM2-201ENST00000235372 DIXDC1Q155Q3 683 aa8.5□□□□□ -1.05
PRDM2-201ENST00000235372 RILPL1Q5EBL4 403 aa8.5□□□□□ -1.05
PRDM2-201ENST00000235372 CCDC25Q86WR0 208 aa8.5□□□□□ -1.05
PRDM2-201ENST00000235372 GTF3C6Q969F1 213 aa8.5□□□□□ -1.05
PRDM2-201ENST00000235372 TRIM6Q9C030 488 aaPredicted RBP8.5□□□□□ -1.05
PRDM2-201ENST00000235372 CETN3O15182 167 aa8.5□□□□□ -1.05
PRDM2-201ENST00000235372 ADAMTS2O95450 1211 aa8.5□□□□□ -1.05
PRDM2-201ENST00000235372 ZNF569Q5MCW4 686 aa8.5□□□□□ -1.05
PRDM2-201ENST00000235372 DDX27Q96GQ7 796 aaKnown RBP8.5□□□□□ -1.05
PRDM2-201ENST00000235372 NEDD9Q14511 834 aa8.5□□□□□ -1.05
PRDM2-201ENST00000235372 PSMD6Q15008 389 aa8.5□□□□□ -1.05
PRDM2-201ENST00000235372 CPLX4Q7Z7G2 160 aa8.5□□□□□ -1.05
PRDM2-201ENST00000235372 LUC7L2Q9Y383 392 aaKnown RBP8.5□□□□□ -1.05
PRDM2-201ENST00000235372 PDE3AQ14432 1141 aa8.5□□□□□ -1.05
PRDM2-201ENST00000235372 WDR44Q5JSH3 913 aa8.5□□□□□ -1.05
PRDM2-201ENST00000235372 FERMT3Q86UX7 667 aa8.5□□□□□ -1.05
PRDM2-201ENST00000235372 NUMA1Q14980 2115 aa8.5□□□□□ -1.05
PRDM2-201ENST00000235372 BMP15O95972 392 aa8.5□□□□□ -1.05
PRDM2-201ENST00000235372 GKAP1Q5VSY0 366 aaPredicted RBP8.5□□□□□ -1.05
PRDM2-201ENST00000235372 RSRC1Q96IZ7 334 aaKnown RBP8.5□□□□□ -1.05
PRDM2-201ENST00000235372 FHOD3Q2V2M9 1422 aa8.5□□□□□ -1.05
PRDM2-201ENST00000235372 CCT2P78371 535 aaKnown RBP8.5□□□□□ -1.05
PRDM2-201ENST00000235372 AKNAD1Q5T1N1 836 aa8.5□□□□□ -1.05
PRDM2-201ENST00000235372 IFIT1BQ5T764 474 aaKnown RBP8.5□□□□□ -1.05
PRDM2-201ENST00000235372 SEL1L2Q5TEA6 688 aa8.5□□□□□ -1.05
PRDM2-201ENST00000235372 CCDC102BQ68D86 513 aa8.5□□□□□ -1.05
PRDM2-201ENST00000235372 STX8Q9UNK0 236 aa8.5□□□□□ -1.05
PRDM2-201ENST00000235372 PPP1R12AO14974 1030 aaPredicted RBP8.49□□□□□ -1.05
PRDM2-201ENST00000235372 C16orf45Q96MC5 204 aaPredicted RBP8.49□□□□□ -1.05
PRDM2-201ENST00000235372 CPSF2Q9P2I0 782 aaKnown RBP8.49□□□□□ -1.05
PRDM2-201ENST00000235372 KRT5P13647 590 aa8.49□□□□□ -1.05
PRDM2-201ENST00000235372 GBP1P32455 592 aa8.49□□□□□ -1.05
PRDM2-201ENST00000235372 PPARDQ03181 441 aa8.49□□□□□ -1.05
PRDM2-201ENST00000235372 PDE1CQ14123 709 aaPredicted RBP8.49□□□□□ -1.05
PRDM2-201ENST00000235372 HEATR3Q7Z4Q2 680 aa8.49□□□□□ -1.05
PRDM2-201ENST00000235372 CEP57Q86XR8 500 aa8.49□□□□□ -1.05
PRDM2-201ENST00000235372 SMIM23A6NLE4 172 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms