RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 BECN2A8MW95 431 aa16.4■□□□□ 0.22
SCNN1A-201ENST00000228916 SUCLG2Q96I99 432 aa16.4■□□□□ 0.22
SCNN1A-201ENST00000228916 NEK1Q96PY6 1258 aa16.4■□□□□ 0.22
SCNN1A-201ENST00000228916 ANO10Q9NW15 660 aa16.4■□□□□ 0.22
SCNN1A-201ENST00000228916 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.4■□□□□ 0.22
SCNN1A-201ENST00000228916 V9GYY5 206 aaPredicted RBP16.4■□□□□ 0.22
SCNN1A-201ENST00000228916 MRC1P22897 1456 aa16.4■□□□□ 0.22
SCNN1A-201ENST00000228916 FILIP1Q7Z7B0 1213 aa16.4■□□□□ 0.22
SCNN1A-201ENST00000228916 ENGASEQ8NFI3 743 aa16.4■□□□□ 0.22
SCNN1A-201ENST00000228916 LRRC59Q96AG4 307 aaKnown RBP16.4■□□□□ 0.22
SCNN1A-201ENST00000228916 COL15A1P39059 1388 aa16.4■□□□□ 0.22
SCNN1A-201ENST00000228916 GSDMDP57764 484 aa16.39■□□□□ 0.21
SCNN1A-201ENST00000228916 FAM193AP78312 1265 aa16.39■□□□□ 0.21
SCNN1A-201ENST00000228916 NAA16Q6N069 864 aaPredicted RBP16.39■□□□□ 0.21
SCNN1A-201ENST00000228916 OSBPL5Q9H0X9 879 aaPredicted RBP16.39■□□□□ 0.21
SCNN1A-201ENST00000228916 TRMT1Q9NXH9 659 aaKnown RBP16.39■□□□□ 0.21
SCNN1A-201ENST00000228916 LMO7Q8WWI1 1683 aa16.39■□□□□ 0.21
SCNN1A-201ENST00000228916 GRM8O00222 908 aa16.39■□□□□ 0.21
SCNN1A-201ENST00000228916 LLPHQ9BRT6 129 aaKnown RBP16.39■□□□□ 0.21
SCNN1A-201ENST00000228916 BICC1Q9H694 974 aaKnown RBP16.39■□□□□ 0.21
SCNN1A-201ENST00000228916 L2HGDHQ9H9P8 463 aa16.39■□□□□ 0.21
SCNN1A-201ENST00000228916 Q6ZUG5 572 aa16.39■□□□□ 0.21
SCNN1A-201ENST00000228916 SCRN1Q12765 414 aa16.38■□□□□ 0.21
SCNN1A-201ENST00000228916 AKAP4Q5JQC9 854 aa16.38■□□□□ 0.21
SCNN1A-201ENST00000228916 ZNF530Q6P9A1 599 aaPredicted RBP16.38■□□□□ 0.21
SCNN1A-201ENST00000228916 NFAT5O94916 1531 aa16.38■□□□□ 0.21
SCNN1A-201ENST00000228916 FAM160A1Q05DH4 1040 aa16.38■□□□□ 0.21
SCNN1A-201ENST00000228916 CCDC73Q6ZRK6 1079 aa16.38■□□□□ 0.21
SCNN1A-201ENST00000228916 NBPF11Q86T75 865 aa16.38■□□□□ 0.21
SCNN1A-201ENST00000228916 LINS1Q8NG48 757 aa16.38■□□□□ 0.21
SCNN1A-201ENST00000228916 BCL11BQ9C0K0 894 aaPredicted RBP16.38■□□□□ 0.21
SCNN1A-201ENST00000228916 ZNF446Q9NWS9 450 aa16.38■□□□□ 0.21
SCNN1A-201ENST00000228916 NCAPD2Q15021 1401 aa16.38■□□□□ 0.21
SCNN1A-201ENST00000228916 CEBPZQ03701 1054 aaKnown RBP16.37■□□□□ 0.21
SCNN1A-201ENST00000228916 ATL3Q6DD88 541 aa16.37■□□□□ 0.21
SCNN1A-201ENST00000228916 CEP57L1Q8IYX8 460 aa16.37■□□□□ 0.21
SCNN1A-201ENST00000228916 IMPACTQ9P2X3 320 aa16.37■□□□□ 0.21
SCNN1A-201ENST00000228916 PXDNQ92626 1479 aa16.37■□□□□ 0.21
SCNN1A-201ENST00000228916 CCDC66A2RUB6 948 aa16.37■□□□□ 0.21
SCNN1A-201ENST00000228916 KINO60870 393 aaKnown RBP16.37■□□□□ 0.21
SCNN1A-201ENST00000228916 H2AFXP16104 143 aaPredicted RBP16.37■□□□□ 0.21
SCNN1A-201ENST00000228916 CREBRFQ8IUR6 639 aa16.37■□□□□ 0.21
SCNN1A-201ENST00000228916 FTOQ9C0B1 505 aaKnown RBP eCLIP16.37■□□□□ 0.21
SCNN1A-201ENST00000228916 PFKFB2O60825 505 aa16.36■□□□□ 0.21
SCNN1A-201ENST00000228916 HEG1Q9ULI3 1381 aa16.36■□□□□ 0.21
SCNN1A-201ENST00000228916 NSUN7Q8NE18 718 aaKnown RBP16.36■□□□□ 0.21
SCNN1A-201ENST00000228916 USP28Q96RU2 1077 aa16.36■□□□□ 0.21
SCNN1A-201ENST00000228916 U3KPZ7 1027 aaPredicted RBP16.36■□□□□ 0.21
SCNN1A-201ENST00000228916 RFX7Q2KHR2 1363 aa16.36■□□□□ 0.21
SCNN1A-201ENST00000228916 HSP90B1P14625 803 aaKnown RBP16.36■□□□□ 0.21
SCNN1A-201ENST00000228916 E4F1Q66K89 784 aaPredicted RBP16.36■□□□□ 0.21
SCNN1A-201ENST00000228916 AOPEPQ8N6M6 819 aa16.36■□□□□ 0.21
SCNN1A-201ENST00000228916 A0A087WWV3 80 aa16.35■□□□□ 0.21
SCNN1A-201ENST00000228916 KCNJ6P48051 423 aa16.35■□□□□ 0.21
SCNN1A-201ENST00000228916 EDC3Q96F86 508 aaKnown RBP16.35■□□□□ 0.21
SCNN1A-201ENST00000228916 CYP21A2P08686 494 aa16.35■□□□□ 0.21
SCNN1A-201ENST00000228916 CCDC93Q567U6 631 aa16.35■□□□□ 0.21
SCNN1A-201ENST00000228916 NAT10Q9H0A0 1025 aaKnown RBP16.35■□□□□ 0.21
SCNN1A-201ENST00000228916 SIL1Q9H173 461 aa16.35■□□□□ 0.21
SCNN1A-201ENST00000228916 RNMTO43148 476 aaKnown RBP16.34■□□□□ 0.21
SCNN1A-201ENST00000228916 CTDNEP1O95476 244 aa16.34■□□□□ 0.21
SCNN1A-201ENST00000228916 KLHDC4Q8TBB5 520 aa16.34■□□□□ 0.21
SCNN1A-201ENST00000228916 PHF8Q9UPP1 1060 aa16.34■□□□□ 0.21
SCNN1A-201ENST00000228916 ATP5JP18859 108 aa16.34■□□□□ 0.21
SCNN1A-201ENST00000228916 FSIP1Q8NA03 581 aa16.34■□□□□ 0.21
SCNN1A-201ENST00000228916 ZNF396Q96N95 335 aaPredicted RBP16.34■□□□□ 0.21
SCNN1A-201ENST00000228916 PSDA5PKW4 1024 aaPredicted RBP16.34■□□□□ 0.21
SCNN1A-201ENST00000228916 PPP1R13BQ96KQ4 1090 aa16.34■□□□□ 0.21
SCNN1A-201ENST00000228916 ZNF609O15014 1411 aa16.34■□□□□ 0.21
SCNN1A-201ENST00000228916 BMS1Q14692 1282 aaKnown RBP16.33■□□□□ 0.21
SCNN1A-201ENST00000228916 FMR1NBQ8N0W7 255 aaPredicted RBP16.33■□□□□ 0.21
SCNN1A-201ENST00000228916 CCDC150Q8NCX0 1101 aa16.33■□□□□ 0.21
SCNN1A-201ENST00000228916 RBM33Q96EV2 1170 aaKnown RBP16.33■□□□□ 0.21
SCNN1A-201ENST00000228916 TMEM51Q9NW97 253 aa16.33■□□□□ 0.21
SCNN1A-201ENST00000228916 ABCC6O95255 1503 aa16.33■□□□□ 0.2
SCNN1A-201ENST00000228916 AIMP1Q12904 312 aaKnown RBP16.33■□□□□ 0.2
SCNN1A-201ENST00000228916 PLEKHO1Q53GL0 409 aaPredicted RBP16.33■□□□□ 0.2
SCNN1A-201ENST00000228916 BPIFA3Q9BQP9 254 aa16.33■□□□□ 0.2
SCNN1A-201ENST00000228916 ST7Q9NRC1 585 aa16.33■□□□□ 0.2
SCNN1A-201ENST00000228916 SALL1Q9NSC2 1324 aa16.32■□□□□ 0.2
SCNN1A-201ENST00000228916 PTPDC1A2A3K4 754 aa16.32■□□□□ 0.2
SCNN1A-201ENST00000228916 TUBB4AP04350 444 aa16.32■□□□□ 0.2
SCNN1A-201ENST00000228916 THEMISQ8N1K5 641 aaPredicted RBP16.32■□□□□ 0.2
SCNN1A-201ENST00000228916 ERCC6LQ2NKX8 1250 aa16.32■□□□□ 0.2
SCNN1A-201ENST00000228916 ARMCX5Q6P1M9 558 aa16.32■□□□□ 0.2
SCNN1A-201ENST00000228916 STOX1Q6ZVD7 989 aa16.32■□□□□ 0.2
SCNN1A-201ENST00000228916 ILDR1Q86SU0 546 aaPredicted RBP16.32■□□□□ 0.2
SCNN1A-201ENST00000228916 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.32■□□□□ 0.2
SCNN1A-201ENST00000228916 HMGB1P09429 215 aaKnown RBP16.32■□□□□ 0.2
SCNN1A-201ENST00000228916 LRRC2Q9BYS8 371 aa16.32■□□□□ 0.2
SCNN1A-201ENST00000228916 AGXT2Q9BYV1 514 aa16.32■□□□□ 0.2
SCNN1A-201ENST00000228916 FHOD1Q9Y613 1164 aa16.32■□□□□ 0.2
SCNN1A-201ENST00000228916 LAMA4Q16363 1823 aa16.31■□□□□ 0.2
SCNN1A-201ENST00000228916 ME1P48163 572 aa16.31■□□□□ 0.2
SCNN1A-201ENST00000228916 CCDC129Q6ZRS4 1044 aa16.31■□□□□ 0.2
SCNN1A-201ENST00000228916 DBNLQ9UJU6 430 aaKnown RBP16.31■□□□□ 0.2
SCNN1A-201ENST00000228916 OVOS2A0A0G2JMS6 1433 aa16.31■□□□□ 0.2
SCNN1A-201ENST00000228916 IGKV5-2P06315 115 aa16.31■□□□□ 0.2
SCNN1A-201ENST00000228916 DHX8Q14562 1220 aaKnown RBP16.31■□□□□ 0.2
SCNN1A-201ENST00000228916 C1orf141Q5JVX7 400 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms