RNA–Protein interactions for RNA: ENST00000228307.11

PXN-201, Transcript of paxillin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PXN, Length 3,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-201ENST00000228307 ZNF75DP51815 510 aa18.37■□□□□ 0.53
PXN-201ENST00000228307 TTLL7Q6ZT98 887 aa18.37■□□□□ 0.53
PXN-201ENST00000228307 KRT222Q8N1A0 295 aa18.37■□□□□ 0.53
PXN-201ENST00000228307 TPCN1Q9ULQ1 816 aa18.37■□□□□ 0.53
PXN-201ENST00000228307 CRB1P82279 1406 aa18.36■□□□□ 0.53
PXN-201ENST00000228307 JAK2O60674 1132 aa18.36■□□□□ 0.53
PXN-201ENST00000228307 URI1O94763 535 aaPredicted RBP18.36■□□□□ 0.53
PXN-201ENST00000228307 AOPEPQ8N6M6 819 aa18.36■□□□□ 0.53
PXN-201ENST00000228307 DCAF5Q96JK2 942 aa18.36■□□□□ 0.53
PXN-201ENST00000228307 LSG1Q9H089 658 aaKnown RBP18.36■□□□□ 0.53
PXN-201ENST00000228307 POLR3DP05423 398 aaPredicted RBP18.36■□□□□ 0.53
PXN-201ENST00000228307 KCNQ4P56696 695 aa18.36■□□□□ 0.53
PXN-201ENST00000228307 STX1AQ16623 288 aa18.36■□□□□ 0.53
PXN-201ENST00000228307 ZNF594Q96JF6 807 aaPredicted RBP18.36■□□□□ 0.53
PXN-201ENST00000228307 OGFRQ9NZT2 677 aa18.36■□□□□ 0.53
PXN-201ENST00000228307 STAP2Q9UGK3 403 aa18.36■□□□□ 0.53
PXN-201ENST00000228307 NR1I2O75469 434 aa18.36■□□□□ 0.53
PXN-201ENST00000228307 SSH3Q8TE77 659 aa18.36■□□□□ 0.53
PXN-201ENST00000228307 LEO1Q8WVC0 666 aaPredicted RBP18.36■□□□□ 0.53
PXN-201ENST00000228307 FER1L4A9Z1Z3 1794 aa18.36■□□□□ 0.53
PXN-201ENST00000228307 VIRMAQ69YN4 1812 aaKnown RBP18.36■□□□□ 0.53
PXN-201ENST00000228307 BEND3Q5T5X7 828 aa18.35■□□□□ 0.53
PXN-201ENST00000228307 TTLL5Q6EMB2 1281 aa18.35■□□□□ 0.53
PXN-201ENST00000228307 ZSCAN25Q6NSZ9 544 aa18.35■□□□□ 0.53
PXN-201ENST00000228307 PDIA4P13667 645 aaKnown RBP18.35■□□□□ 0.53
PXN-201ENST00000228307 SNW1Q13573 536 aaKnown RBP18.35■□□□□ 0.53
PXN-201ENST00000228307 Q6ZUG5 572 aa18.35■□□□□ 0.53
PXN-201ENST00000228307 DDX46Q7L014 1031 aaKnown RBP18.35■□□□□ 0.53
PXN-201ENST00000228307 RALYLQ86SE5 291 aaKnown RBP18.35■□□□□ 0.53
PXN-201ENST00000228307 LINS1Q8NG48 757 aa18.35■□□□□ 0.53
PXN-201ENST00000228307 FEZ1Q99689 392 aa18.35■□□□□ 0.53
PXN-201ENST00000228307 UBR1Q8IWV7 1749 aa18.35■□□□□ 0.53
PXN-201ENST00000228307 KIF20AO95235 890 aa18.34■□□□□ 0.53
PXN-201ENST00000228307 CFAP100Q494V2 611 aa18.34■□□□□ 0.53
PXN-201ENST00000228307 CHST3Q7LGC8 479 aa18.34■□□□□ 0.53
PXN-201ENST00000228307 EXOC5O00471 708 aa18.34■□□□□ 0.53
PXN-201ENST00000228307 FAM182BQ5T319 152 aa18.34■□□□□ 0.53
PXN-201ENST00000228307 FAM89AQ96GI7 184 aa18.34■□□□□ 0.53
PXN-201ENST00000228307 BBXQ8WY36 941 aaPredicted RBP18.33■□□□□ 0.53
PXN-201ENST00000228307 MRVI1Q9Y6F6 885 aa18.33■□□□□ 0.53
PXN-201ENST00000228307 SLC27A2O14975 620 aa18.33■□□□□ 0.52
PXN-201ENST00000228307 HSP90AA4PQ58FG1 418 aa18.33■□□□□ 0.52
PXN-201ENST00000228307 KIF6Q6ZMV9 814 aa18.33■□□□□ 0.52
PXN-201ENST00000228307 ATP10DQ9P241 1426 aa18.33■□□□□ 0.52
PXN-201ENST00000228307 TTC41PQ6P2S7 1318 aa18.33■□□□□ 0.52
PXN-201ENST00000228307 GTF2F1P35269 517 aaKnown RBP eCLIP18.33■□□□□ 0.52
PXN-201ENST00000228307 ELF2Q15723 593 aa18.33■□□□□ 0.52
PXN-201ENST00000228307 ASAP1Q9ULH1 1129 aa18.33■□□□□ 0.52
PXN-201ENST00000228307 GPS2Q13227 327 aa18.32■□□□□ 0.52
PXN-201ENST00000228307 HSP90AB3PQ58FF7 597 aa18.32■□□□□ 0.52
PXN-201ENST00000228307 DNAJC10Q8IXB1 793 aa18.32■□□□□ 0.52
PXN-201ENST00000228307 TIMM10P62072 90 aa18.32■□□□□ 0.52
PXN-201ENST00000228307 ANKARQ7Z5J8 1434 aa18.32■□□□□ 0.52
PXN-201ENST00000228307 ZNF215Q9UL58 517 aaPredicted RBP18.32■□□□□ 0.52
PXN-201ENST00000228307 PES1O00541 588 aaKnown RBP18.31■□□□□ 0.52
PXN-201ENST00000228307 SKIDA1Q1XH10 827 aa18.31■□□□□ 0.52
PXN-201ENST00000228307 CCDC57Q2TAC2 916 aa18.31■□□□□ 0.52
PXN-201ENST00000228307 TMCO3Q6UWJ1 677 aa18.31■□□□□ 0.52
PXN-201ENST00000228307 CCDC129Q6ZRS4 1044 aa18.31■□□□□ 0.52
PXN-201ENST00000228307 CACTINQ8WUQ7 758 aaKnown RBP18.31■□□□□ 0.52
PXN-201ENST00000228307 NRXN3Q9Y4C0 1643 aa18.31■□□□□ 0.52
PXN-201ENST00000228307 C3P01024 1663 aa18.31■□□□□ 0.52
PXN-201ENST00000228307 SSH2Q76I76 1423 aa18.31■□□□□ 0.52
PXN-201ENST00000228307 TRDNQ13061 729 aa18.31■□□□□ 0.52
PXN-201ENST00000228307 CPLX2Q6PUV4 134 aaKnown RBP18.31■□□□□ 0.52
PXN-201ENST00000228307 GTF3C6Q969F1 213 aa18.31■□□□□ 0.52
PXN-201ENST00000228307 NGLY1Q96IV0 654 aa18.31■□□□□ 0.52
PXN-201ENST00000228307 CLSTN2Q9H4D0 955 aa18.31■□□□□ 0.52
PXN-201ENST00000228307 NEMFO60524 1076 aa18.31■□□□□ 0.52
PXN-201ENST00000228307 OLFM4Q6UX06 510 aa18.31■□□□□ 0.52
PXN-201ENST00000228307 SYT10Q6XYQ8 523 aa18.31■□□□□ 0.52
PXN-201ENST00000228307 ZNF710Q8N1W2 664 aa18.31■□□□□ 0.52
PXN-201ENST00000228307 C8orf37Q96NL8 207 aa18.31■□□□□ 0.52
PXN-201ENST00000228307 CNNM1Q9NRU3 951 aa18.31■□□□□ 0.52
PXN-201ENST00000228307 CTAGE5O15320 804 aa18.3■□□□□ 0.52
PXN-201ENST00000228307 NFXL1Q6ZNB6 911 aa18.3■□□□□ 0.52
PXN-201ENST00000228307 DNAI1Q9UI46 699 aa18.3■□□□□ 0.52
PXN-201ENST00000228307 C1orf167Q5SNV9 1468 aa18.3■□□□□ 0.52
PXN-201ENST00000228307 SLU7O95391 586 aaKnown RBP18.3■□□□□ 0.52
PXN-201ENST00000228307 LMOD1P29536 600 aaPredicted RBP18.3■□□□□ 0.52
PXN-201ENST00000228307 TRIM29Q14134 588 aa18.3■□□□□ 0.52
PXN-201ENST00000228307 KIF20BQ96Q89 1820 aa18.3■□□□□ 0.52
PXN-201ENST00000228307 HELBQ8NG08 1087 aaPredicted RBP18.3■□□□□ 0.52
PXN-201ENST00000228307 CHMP4CQ96CF2 233 aa18.3■□□□□ 0.52
PXN-201ENST00000228307 TLR7Q9NYK1 1049 aaKnown RBP18.3■□□□□ 0.52
PXN-201ENST00000228307 AOX1Q06278 1338 aa18.29■□□□□ 0.52
PXN-201ENST00000228307 REREQ9P2R6 1566 aa18.29■□□□□ 0.52
PXN-201ENST00000228307 KDRP35968 1356 aa18.29■□□□□ 0.52
PXN-201ENST00000228307 HAND2P61296 217 aa18.29■□□□□ 0.52
PXN-201ENST00000228307 KCNF1Q9H3M0 494 aa18.29■□□□□ 0.52
PXN-201ENST00000228307 ZSWIM6Q9HCJ5 1215 aa18.29■□□□□ 0.52
PXN-201ENST00000228307 TFCP2Q12800 502 aa18.29■□□□□ 0.52
PXN-201ENST00000228307 ARID5BQ14865 1188 aa18.29■□□□□ 0.52
PXN-201ENST00000228307 ZNF397Q8NF99 534 aaPredicted RBP18.29■□□□□ 0.52
PXN-201ENST00000228307 PI4K2BQ8TCG2 481 aa18.29■□□□□ 0.52
PXN-201ENST00000228307 NOL10Q9BSC4 688 aaKnown RBP18.29■□□□□ 0.52
PXN-201ENST00000228307 ZSCAN16Q9H4T2 348 aaPredicted RBP18.29■□□□□ 0.52
PXN-201ENST00000228307 A0A1B0GVL5 298 aa18.28■□□□□ 0.52
PXN-201ENST00000228307 GOLIM4O00461 696 aa18.28■□□□□ 0.52
PXN-201ENST00000228307 RPS6KB1P23443 525 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms