RNA–Protein interactions for RNA: ENST00000227524.8

PRPF19-201, Transcript of pre-mRNA processing factor 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF19, Length 2,157 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-201ENST00000227524 IL2RBP14784 551 aa20.67■□□□□ 0.9
PRPF19-201ENST00000227524 STK3Q13188 491 aa20.67■□□□□ 0.9
PRPF19-201ENST00000227524 PCDH11XQ9BZA7 1347 aa20.67■□□□□ 0.9
PRPF19-201ENST00000227524 PCDH11YQ9BZA8 1340 aa20.67■□□□□ 0.9
PRPF19-201ENST00000227524 ZNF496Q96IT1 587 aaPredicted RBP20.66■□□□□ 0.9
PRPF19-201ENST00000227524 COL14A1Q05707 1796 aaKnown RBP20.66■□□□□ 0.9
PRPF19-201ENST00000227524 PDIA6Q15084 440 aa20.66■□□□□ 0.9
PRPF19-201ENST00000227524 DDX21Q9NR30 783 aaKnown RBP eCLIP20.66■□□□□ 0.9
PRPF19-201ENST00000227524 BTG4Q9NY30 223 aa20.66■□□□□ 0.9
PRPF19-201ENST00000227524 MYH15Q9Y2K3 1946 aa20.66■□□□□ 0.9
PRPF19-201ENST00000227524 EVA1CP58658 441 aa20.65■□□□□ 0.9
PRPF19-201ENST00000227524 AIMP1Q12904 312 aaKnown RBP20.65■□□□□ 0.9
PRPF19-201ENST00000227524 TAF5LO75529 589 aa20.65■□□□□ 0.9
PRPF19-201ENST00000227524 IGKV5-2P06315 115 aa20.65■□□□□ 0.9
PRPF19-201ENST00000227524 TDRD7Q8NHU6 1098 aaKnown RBP20.65■□□□□ 0.9
PRPF19-201ENST00000227524 USPL1Q5W0Q7 1092 aa20.64■□□□□ 0.89
PRPF19-201ENST00000227524 PLA2G4DQ86XP0 818 aa20.64■□□□□ 0.89
PRPF19-201ENST00000227524 KLHDC4Q8TBB5 520 aa20.64■□□□□ 0.89
PRPF19-201ENST00000227524 ZNF75DP51815 510 aa20.63■□□□□ 0.89
PRPF19-201ENST00000227524 RESTQ13127 1097 aa20.63■□□□□ 0.89
PRPF19-201ENST00000227524 NKX1-1Q15270 411 aaPredicted RBP20.63■□□□□ 0.89
PRPF19-201ENST00000227524 CCDC186Q7Z3E2 898 aa20.63■□□□□ 0.89
PRPF19-201ENST00000227524 GTF3C6Q969F1 213 aa20.63■□□□□ 0.89
PRPF19-201ENST00000227524 PGBD1Q96JS3 809 aa20.63■□□□□ 0.89
PRPF19-201ENST00000227524 JAK2O60674 1132 aa20.63■□□□□ 0.89
PRPF19-201ENST00000227524 NR1I2O75469 434 aa20.63■□□□□ 0.89
PRPF19-201ENST00000227524 COL15A1P39059 1388 aa20.63■□□□□ 0.89
PRPF19-201ENST00000227524 KRT32Q14532 448 aa20.63■□□□□ 0.89
PRPF19-201ENST00000227524 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.63■□□□□ 0.89
PRPF19-201ENST00000227524 CABP4P57796 275 aa20.62■□□□□ 0.89
PRPF19-201ENST00000227524 BICD2Q8TD16 824 aa20.62■□□□□ 0.89
PRPF19-201ENST00000227524 EDC3Q96F86 508 aaKnown RBP20.62■□□□□ 0.89
PRPF19-201ENST00000227524 PRDM10Q9NQV6 1147 aa20.62■□□□□ 0.89
PRPF19-201ENST00000227524 CTIFO43310 598 aaKnown RBP20.62■□□□□ 0.89
PRPF19-201ENST00000227524 PPP4R3BQ5MIZ7 849 aa20.62■□□□□ 0.89
PRPF19-201ENST00000227524 DRC7Q8IY82 874 aa20.62■□□□□ 0.89
PRPF19-201ENST00000227524 PHLPP1O60346 1717 aa20.62■□□□□ 0.89
PRPF19-201ENST00000227524 TOGARAM1Q9Y4F4 1720 aa20.62■□□□□ 0.89
PRPF19-201ENST00000227524 LRMPQ12912 555 aa20.61■□□□□ 0.89
PRPF19-201ENST00000227524 RIC3Q7Z5B4 369 aa20.61■□□□□ 0.89
PRPF19-201ENST00000227524 ANKRD7Q92527 254 aa20.61■□□□□ 0.89
PRPF19-201ENST00000227524 BRF1Q92994 677 aa20.61■□□□□ 0.89
PRPF19-201ENST00000227524 TRIM5Q9C035 493 aa20.61■□□□□ 0.89
PRPF19-201ENST00000227524 LAMA4Q16363 1823 aa20.61■□□□□ 0.89
PRPF19-201ENST00000227524 UBR2Q8IWV8 1755 aa20.61■□□□□ 0.89
PRPF19-201ENST00000227524 NEURL1BA8MQ27 555 aa20.61■□□□□ 0.89
PRPF19-201ENST00000227524 NRBP1Q9UHY1 535 aa20.61■□□□□ 0.89
PRPF19-201ENST00000227524 PAPPAQ13219 1627 aa20.6■□□□□ 0.89
PRPF19-201ENST00000227524 UBAP1LF5GYI3 381 aa20.6■□□□□ 0.89
PRPF19-201ENST00000227524 EPHA10Q5JZY3 1008 aa20.6■□□□□ 0.89
PRPF19-201ENST00000227524 PDCL2Q8N4E4 241 aa20.6■□□□□ 0.89
PRPF19-201ENST00000227524 NEK1Q96PY6 1258 aa20.6■□□□□ 0.89
PRPF19-201ENST00000227524 DNAJC25Q9H1X3 360 aa20.6■□□□□ 0.89
PRPF19-201ENST00000227524 USP16Q9Y5T5 823 aa20.6■□□□□ 0.89
PRPF19-201ENST00000227524 RFX7Q2KHR2 1363 aa20.6■□□□□ 0.89
PRPF19-201ENST00000227524 ATP5JP18859 108 aa20.59■□□□□ 0.89
PRPF19-201ENST00000227524 ZNF165P49910 485 aa20.59■□□□□ 0.89
PRPF19-201ENST00000227524 ZSCAN25Q6NSZ9 544 aa20.59■□□□□ 0.89
PRPF19-201ENST00000227524 ZNF609O15014 1411 aa20.59■□□□□ 0.89
PRPF19-201ENST00000227524 AFDNP55196 1824 aaKnown RBP20.59■□□□□ 0.89
PRPF19-201ENST00000227524 GCKRQ14397 625 aa20.59■□□□□ 0.89
PRPF19-201ENST00000227524 Q6ZUG5 572 aa20.59■□□□□ 0.89
PRPF19-201ENST00000227524 LRP10Q7Z4F1 713 aa20.59■□□□□ 0.89
PRPF19-201ENST00000227524 TTC5Q8N0Z6 440 aa20.59■□□□□ 0.89
PRPF19-201ENST00000227524 DISP2A7MBM2 1401 aa20.59■□□□□ 0.89
PRPF19-201ENST00000227524 ERVV-2B6SEH9 535 aa20.58■□□□□ 0.89
PRPF19-201ENST00000227524 NEXNQ0ZGT2 675 aa20.58■□□□□ 0.89
PRPF19-201ENST00000227524 ATP2B3Q16720 1220 aa20.58■□□□□ 0.89
PRPF19-201ENST00000227524 FMNL2Q96PY5 1086 aa20.58■□□□□ 0.89
PRPF19-201ENST00000227524 DBNLQ9UJU6 430 aaKnown RBP20.58■□□□□ 0.89
PRPF19-201ENST00000227524 LAMB4A4D0S4 1761 aa20.58■□□□□ 0.88
PRPF19-201ENST00000227524 SNRPA1P09661 255 aaKnown RBP20.58■□□□□ 0.88
PRPF19-201ENST00000227524 ZSCAN16Q9H4T2 348 aaPredicted RBP20.58■□□□□ 0.88
PRPF19-201ENST00000227524 U3KPZ7 1027 aaPredicted RBP20.58■□□□□ 0.88
PRPF19-201ENST00000227524 H3BQV1 296 aa20.57■□□□□ 0.88
PRPF19-201ENST00000227524 HSP90B1P14625 803 aaKnown RBP20.57■□□□□ 0.88
PRPF19-201ENST00000227524 CBX1P83916 185 aa20.57■□□□□ 0.88
PRPF19-201ENST00000227524 IFFO2Q5TF58 517 aa20.57■□□□□ 0.88
PRPF19-201ENST00000227524 COPRSQ9NQ92 184 aa20.57■□□□□ 0.88
PRPF19-201ENST00000227524 KCPQ6ZWJ8 1503 aa20.56■□□□□ 0.88
PRPF19-201ENST00000227524 CAVIN2O95810 425 aa20.56■□□□□ 0.88
PRPF19-201ENST00000227524 CDC25BP30305 580 aa20.56■□□□□ 0.88
PRPF19-201ENST00000227524 TNNI3KQ59H18 835 aa20.56■□□□□ 0.88
PRPF19-201ENST00000227524 CCDC129Q6ZRS4 1044 aa20.56■□□□□ 0.88
PRPF19-201ENST00000227524 DDX11Q96FC9 970 aa20.56■□□□□ 0.88
PRPF19-201ENST00000227524 MYD88Q99836 296 aa20.56■□□□□ 0.88
PRPF19-201ENST00000227524 CLIP2Q9UDT6 1046 aa20.56■□□□□ 0.88
PRPF19-201ENST00000227524 FPGT-TNNI3KV9GXZ4 949 aa20.56■□□□□ 0.88
PRPF19-201ENST00000227524 PLCH1Q4KWH8 1693 aa20.56■□□□□ 0.88
PRPF19-201ENST00000227524 TOM1O60784 492 aa20.56■□□□□ 0.88
PRPF19-201ENST00000227524 DMTNQ08495 405 aa20.56■□□□□ 0.88
PRPF19-201ENST00000227524 C16orf45Q96MC5 204 aaPredicted RBP20.56■□□□□ 0.88
PRPF19-201ENST00000227524 CFAP45Q9UL16 551 aa20.56■□□□□ 0.88
PRPF19-201ENST00000227524 MYL6BP14649 208 aa20.55■□□□□ 0.88
PRPF19-201ENST00000227524 ZSCAN20P17040 1043 aaPredicted RBP20.55■□□□□ 0.88
PRPF19-201ENST00000227524 RFX5P48382 616 aaPredicted RBP20.55■□□□□ 0.88
PRPF19-201ENST00000227524 XAGE3Q8WTP9 111 aa20.55■□□□□ 0.88
PRPF19-201ENST00000227524 METTL22Q9BUU2 404 aaPredicted RBP20.55■□□□□ 0.88
PRPF19-201ENST00000227524 SMTNL1A8MU46 457 aa20.55■□□□□ 0.88
PRPF19-201ENST00000227524 CYP21A2P08686 494 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms