RNA–Protein interactions for RNA: ENST00000226359.2

AFP-201, Transcript of alpha fetoprotein, humanhuman

TSL 5 BASIC

Gene AFP, Length 1,914 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-201ENST00000226359 NFATC2IPQ8NCF5 419 aa7.46□□□□□ -1.22
AFP-201ENST00000226359 LINC00116Q8NCU8 138 aa7.46□□□□□ -1.22
AFP-201ENST00000226359 ZBTB3Q9H5J0 574 aa7.46□□□□□ -1.22
AFP-201ENST00000226359 C5P01031 1676 aa7.46□□□□□ -1.22
AFP-201ENST00000226359 PATL2C9JE40 543 aaKnown RBP7.45□□□□□ -1.22
AFP-201ENST00000226359 DDX10Q13206 875 aaKnown RBP7.45□□□□□ -1.22
AFP-201ENST00000226359 KMT5BQ4FZB7 885 aa7.45□□□□□ -1.22
AFP-201ENST00000226359 TRAPPC3LQ5T215 181 aa7.45□□□□□ -1.22
AFP-201ENST00000226359 COL23A1Q86Y22 540 aaPredicted RBP7.45□□□□□ -1.22
AFP-201ENST00000226359 FHDC1Q9C0D6 1143 aaPredicted RBP7.45□□□□□ -1.22
AFP-201ENST00000226359 PDGFDQ9GZP0 370 aaPredicted RBP7.45□□□□□ -1.22
AFP-201ENST00000226359 USTQ9Y2C2 406 aa7.45□□□□□ -1.22
AFP-201ENST00000226359 QSER1Q2KHR3 1735 aa7.45□□□□□ -1.22
AFP-201ENST00000226359 C4BP0C0L5 1744 aa7.45□□□□□ -1.22
AFP-201ENST00000226359 RFC4P35249 363 aa7.44□□□□□ -1.22
AFP-201ENST00000226359 PPP4CP60510 307 aa7.44□□□□□ -1.22
AFP-201ENST00000226359 MTMR2Q13614 643 aa7.44□□□□□ -1.22
AFP-201ENST00000226359 WDR43Q15061 677 aaKnown RBP eCLIP7.44□□□□□ -1.22
AFP-201ENST00000226359 CCDC27Q2M243 656 aa7.44□□□□□ -1.22
AFP-201ENST00000226359 WBP1LQ9NX94 342 aa7.44□□□□□ -1.22
AFP-201ENST00000226359 MYBBP1AQ9BQG0 1328 aaKnown RBP7.44□□□□□ -1.22
AFP-201ENST00000226359 MRC1P22897 1456 aa7.44□□□□□ -1.22
AFP-201ENST00000226359 C6orf229H3BNL8 230 aa7.44□□□□□ -1.22
AFP-201ENST00000226359 ACTN4O43707 911 aaKnown RBP7.44□□□□□ -1.22
AFP-201ENST00000226359 STARD3NLO95772 234 aa7.44□□□□□ -1.22
AFP-201ENST00000226359 USP17L8P0C7I0 530 aa7.44□□□□□ -1.22
AFP-201ENST00000226359 ITPK1Q13572 414 aa7.44□□□□□ -1.22
AFP-201ENST00000226359 MORN1Q5T089 497 aa7.44□□□□□ -1.22
AFP-201ENST00000226359 PRPF38BQ5VTL8 546 aaKnown RBP7.44□□□□□ -1.22
AFP-201ENST00000226359 TEX13AQ9BXU3 409 aaPredicted RBP7.44□□□□□ -1.22
AFP-201ENST00000226359 SLC27A5Q9Y2P5 690 aa7.44□□□□□ -1.22
AFP-201ENST00000226359 CFAP99D6REC4 459 aa7.43□□□□□ -1.22
AFP-201ENST00000226359 HTATSF1O43719 755 aaKnown RBP7.43□□□□□ -1.22
AFP-201ENST00000226359 RPS6KA4O75676 772 aa7.43□□□□□ -1.22
AFP-201ENST00000226359 ITGB4P16144 1822 aa7.43□□□□□ -1.22
AFP-201ENST00000226359 CRKLP46109 303 aaKnown RBP7.43□□□□□ -1.22
AFP-201ENST00000226359 LMOD3Q0VAK6 560 aa7.43□□□□□ -1.22
AFP-201ENST00000226359 GPR162Q16538 588 aa7.43□□□□□ -1.22
AFP-201ENST00000226359 GRIPAP1Q4V328 841 aa7.43□□□□□ -1.22
AFP-201ENST00000226359 TREML4Q6UXN2 200 aa7.43□□□□□ -1.22
AFP-201ENST00000226359 TSC1Q92574 1164 aa7.43□□□□□ -1.22
AFP-201ENST00000226359 A0A087WZG4 1122 aa7.42□□□□□ -1.22
AFP-201ENST00000226359 ZPR1O75312 459 aa7.42□□□□□ -1.22
AFP-201ENST00000226359 NLGN1Q8N2Q7 840 aa7.42□□□□□ -1.22
AFP-201ENST00000226359 PNISRQ8TF01 805 aaKnown RBP7.42□□□□□ -1.22
AFP-201ENST00000226359 FMNL2Q96PY5 1086 aa7.42□□□□□ -1.22
AFP-201ENST00000226359 SYT17Q9BSW7 474 aa7.42□□□□□ -1.22
AFP-201ENST00000226359 PPP1R12CQ9BZL4 782 aa7.42□□□□□ -1.22
AFP-201ENST00000226359 LGR6Q9HBX8 967 aa7.42□□□□□ -1.22
AFP-201ENST00000226359 PRM3Q9NNZ6 103 aa7.42□□□□□ -1.22
AFP-201ENST00000226359 CCDC87Q9NVE4 849 aa7.42□□□□□ -1.22
AFP-201ENST00000226359 TSR3Q9UJK0 312 aaKnown RBP7.42□□□□□ -1.22
AFP-201ENST00000226359 BTBD11A6QL63 1104 aa7.42□□□□□ -1.22
AFP-201ENST00000226359 BLOC1S3Q6QNY0 202 aa7.42□□□□□ -1.22
AFP-201ENST00000226359 RNF19BQ6ZMZ0 732 aa7.42□□□□□ -1.22
AFP-201ENST00000226359 PARP3Q9Y6F1 533 aa7.42□□□□□ -1.22
AFP-201ENST00000226359 V9GY48 417 aaPredicted RBP7.42□□□□□ -1.22
AFP-201ENST00000226359 YY1P25490 414 aa7.41□□□□□ -1.22
AFP-201ENST00000226359 SLC39A6Q13433 755 aa7.41□□□□□ -1.22
AFP-201ENST00000226359 SND1Q7KZF4 910 aaKnown RBP eCLIP7.41□□□□□ -1.227e-75■■■■□ 25.3
AFP-201ENST00000226359 DNAJC10Q8IXB1 793 aa7.41□□□□□ -1.22
AFP-201ENST00000226359 CD2APQ9Y5K6 639 aa7.41□□□□□ -1.22
AFP-201ENST00000226359 ZNF831Q5JPB2 1677 aa7.41□□□□□ -1.22
AFP-201ENST00000226359 UNCXA6NJT0 531 aa7.4□□□□□ -1.22
AFP-201ENST00000226359 GRIN3BO60391 1043 aa7.4□□□□□ -1.22
AFP-201ENST00000226359 GPR37L1O60883 481 aa7.4□□□□□ -1.22
AFP-201ENST00000226359 CENPBP07199 599 aaPredicted RBP7.4□□□□□ -1.22
AFP-201ENST00000226359 CTDSPL2Q05D32 466 aa7.4□□□□□ -1.22
AFP-201ENST00000226359 VAC14Q08AM6 782 aa7.4□□□□□ -1.22
AFP-201ENST00000226359 NFE2L2Q16236 605 aa7.4□□□□□ -1.22
AFP-201ENST00000226359 ZNF790Q6PG37 636 aa7.4□□□□□ -1.22
AFP-201ENST00000226359 HMX1Q9NP08 348 aaPredicted RBP7.4□□□□□ -1.22
AFP-201ENST00000226359 MMP10P09238 476 aa7.4□□□□□ -1.23
AFP-201ENST00000226359 LMOD1P29536 600 aaPredicted RBP7.4□□□□□ -1.23
AFP-201ENST00000226359 PRKD2Q9BZL6 878 aa7.4□□□□□ -1.23
AFP-201ENST00000226359 PCDHB3Q9Y5E6 796 aa7.4□□□□□ -1.23
AFP-201ENST00000226359 COL15A1P39059 1388 aa7.39□□□□□ -1.23
AFP-201ENST00000226359 CEMIPQ8WUJ3 1361 aa7.39□□□□□ -1.23
AFP-201ENST00000226359 HEG1Q9ULI3 1381 aa7.39□□□□□ -1.23
AFP-201ENST00000226359 SCN11AQ9UI33 1791 aa7.39□□□□□ -1.23
AFP-201ENST00000226359 PALM3A6NDB9 673 aaPredicted RBP7.39□□□□□ -1.23
AFP-201ENST00000226359 NPHP1O15259 732 aa7.39□□□□□ -1.23
AFP-201ENST00000226359 IL17REQ8NFR9 667 aa7.39□□□□□ -1.23
AFP-201ENST00000226359 PHACTR3Q96KR7 559 aa7.39□□□□□ -1.23
AFP-201ENST00000226359 SLC4A9Q96Q91 983 aa7.39□□□□□ -1.23
AFP-201ENST00000226359 VRTNQ9H8Y1 702 aa7.39□□□□□ -1.23
AFP-201ENST00000226359 TUBGCP6Q96RT7 1819 aa7.39□□□□□ -1.23
AFP-201ENST00000226359 SOS1Q07889 1333 aaPredicted RBP7.39□□□□□ -1.23
AFP-201ENST00000226359 USP42Q9H9J4 1324 aaKnown RBP7.39□□□□□ -1.23
AFP-201ENST00000226359 TAF1LQ8IZX4 1826 aa7.39□□□□□ -1.23
AFP-201ENST00000226359 CYP19A1P11511 503 aaPredicted RBP7.39□□□□□ -1.23
AFP-201ENST00000226359 CANXP27824 592 aaKnown RBP7.39□□□□□ -1.23
AFP-201ENST00000226359 TAF7Q15545 349 aaPredicted RBP7.39□□□□□ -1.23
AFP-201ENST00000226359 MCM10Q7L590 875 aa7.39□□□□□ -1.23
AFP-201ENST00000226359 PRR7Q8TB68 274 aa7.39□□□□□ -1.23
AFP-201ENST00000226359 LRRN4Q8WUT4 740 aa7.39□□□□□ -1.23
AFP-201ENST00000226359 PRR14Q9BWN1 585 aa7.39□□□□□ -1.23
AFP-201ENST00000226359 NDUFB9Q9Y6M9 179 aa7.39□□□□□ -1.23
AFP-201ENST00000226359 KCPQ6ZWJ8 1503 aa7.38□□□□□ -1.23
AFP-201ENST00000226359 TMEM88BA6NKF7 163 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms