RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 SLC39A6Q13433 755 aa15.1■□□□□ 0.01
COL1A1-201ENST00000225964 IMPG2Q9BZV3 1241 aa15.1■□□□□ 0.01
COL1A1-201ENST00000225964 N4BP3O15049 544 aa15.1■□□□□ 0.01
COL1A1-201ENST00000225964 DDB1Q16531 1140 aa15.1■□□□□ 0.01
COL1A1-201ENST00000225964 ESPNB1AK53 854 aa15.1■□□□□ 0.01
COL1A1-201ENST00000225964 SMARCC1Q92922 1105 aaPredicted RBP15.1■□□□□ 0.01
COL1A1-201ENST00000225964 POTEB2H3BUK9 544 aa15.1■□□□□ 0.01
COL1A1-201ENST00000225964 SYKP43405 635 aa15.1■□□□□ 0.01
COL1A1-201ENST00000225964 NBPF14Q5TI25 921 aa15.1■□□□□ 0.01
COL1A1-201ENST00000225964 JDP2Q8WYK2 163 aa15.1■□□□□ 0.01
COL1A1-201ENST00000225964 FAM13AO94988 1023 aa15.1■□□□□ 0.01
COL1A1-201ENST00000225964 RAB3IL1Q8TBN0 382 aa15.1■□□□□ 0.01
COL1A1-201ENST00000225964 C6orf50Q9HD87 102 aa15.1■□□□□ 0.01
COL1A1-201ENST00000225964 SPDYE3A6NKU9 549 aa15.09■□□□□ 0.01
COL1A1-201ENST00000225964 EEF2P13639 858 aaKnown RBP15.09■□□□□ 0.01
COL1A1-201ENST00000225964 TBC1D9Q6ZT07 1266 aa15.09■□□□□ 0.01
COL1A1-201ENST00000225964 SKAP1Q86WV1 359 aa15.09■□□□□ 0.01
COL1A1-201ENST00000225964 GJA3Q9Y6H8 435 aa15.09■□□□□ 0.01
COL1A1-201ENST00000225964 IDI1Q13907 227 aa15.09■□□□□ 0.01
COL1A1-201ENST00000225964 GSTA5Q7RTV2 222 aa15.09■□□□□ 0.01
COL1A1-201ENST00000225964 SIRT1Q96EB6 747 aa15.09■□□□□ 0.01
COL1A1-201ENST00000225964 RRP36Q96EU6 259 aaKnown RBP15.09■□□□□ 0.01
COL1A1-201ENST00000225964 DZIP3Q86Y13 1208 aaKnown RBP15.09■□□□□ 0.01
COL1A1-201ENST00000225964 BBXQ8WY36 941 aaPredicted RBP15.09■□□□□ 0.01
COL1A1-201ENST00000225964 RTCBQ9Y3I0 505 aaKnown RBP15.09■□□□□ 0.01
COL1A1-201ENST00000225964 SP4Q02446 784 aa15.09■□□□□ 0.01
COL1A1-201ENST00000225964 NECAB1Q8N987 351 aa15.08■□□□□ 0.01
COL1A1-201ENST00000225964 CGNQ9P2M7 1197 aaKnown RBP15.08■□□□□ 0.01
COL1A1-201ENST00000225964 NCOA1Q15788 1441 aa15.08■□□□□ 0
COL1A1-201ENST00000225964 HSF2BPO75031 334 aa15.08■□□□□ 0
COL1A1-201ENST00000225964 SNW1Q13573 536 aaKnown RBP15.08■□□□□ 0
COL1A1-201ENST00000225964 ZSCAN30Q86W11 494 aa15.08■□□□□ 0
COL1A1-201ENST00000225964 SPAG5Q96R06 1193 aa15.08■□□□□ 0
COL1A1-201ENST00000225964 PLVAPQ9BX97 442 aa15.08■□□□□ 0
COL1A1-201ENST00000225964 CBX1P83916 185 aa15.08■□□□□ 0
COL1A1-201ENST00000225964 COPS6Q7L5N1 327 aa15.08■□□□□ 0
COL1A1-201ENST00000225964 CCDC155Q8N6L0 562 aa15.08■□□□□ 0
COL1A1-201ENST00000225964 CEP112Q8N8E3 955 aa15.08■□□□□ 0
COL1A1-201ENST00000225964 ASIC1P78348 528 aa15.08■□□□□ 0
COL1A1-201ENST00000225964 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.08■□□□□ 0
COL1A1-201ENST00000225964 HSP90AA4PQ58FG1 418 aa15.07■□□□□ 0
COL1A1-201ENST00000225964 TTC22Q5TAA0 569 aa15.07■□□□□ 0
COL1A1-201ENST00000225964 APBB1IPQ7Z5R6 666 aaPredicted RBP15.07■□□□□ 0
COL1A1-201ENST00000225964 CCDC50Q8IVM0 306 aa15.07■□□□□ 0
COL1A1-201ENST00000225964 DENND4BO75064 1496 aaPredicted RBP15.07■□□□□ 0
COL1A1-201ENST00000225964 NDC80O14777 642 aa15.07■□□□□ 0
COL1A1-201ENST00000225964 RBM25P49756 843 aaKnown RBP15.07■□□□□ 0
COL1A1-201ENST00000225964 TMTC2Q8N394 836 aa15.07■□□□□ 0
COL1A1-201ENST00000225964 ZC3H12CQ9C0D7 883 aaKnown RBP15.07■□□□□ 0
COL1A1-201ENST00000225964 RBM27Q9P2N5 1060 aaKnown RBP15.07■□□□□ 0
COL1A1-201ENST00000225964 AKR1B10O60218 316 aa15.07■□□□□ 0
COL1A1-201ENST00000225964 C6orf163Q5TEZ5 329 aa15.07■□□□□ 0
COL1A1-201ENST00000225964 DDX12PQ92771 950 aa15.07■□□□□ 0
COL1A1-201ENST00000225964 TNPO1Q92973 898 aaKnown RBP15.07■□□□□ 0
COL1A1-201ENST00000225964 IQCGQ9H095 443 aaKnown RBP15.07■□□□□ 0
COL1A1-201ENST00000225964 SBNO2Q9Y2G9 1366 aa15.07■□□□□ 0
COL1A1-201ENST00000225964 ZFYP08048 801 aaPredicted RBP15.07■□□□□ 0
COL1A1-201ENST00000225964 GNAQP50148 359 aa15.07■□□□□ 0
COL1A1-201ENST00000225964 CCDC63Q8NA47 563 aa15.07■□□□□ 0
COL1A1-201ENST00000225964 ZSWIM4Q9H7M6 989 aa15.07■□□□□ 0
COL1A1-201ENST00000225964 JAG2Q9Y219 1238 aa15.07■□□□□ 0
COL1A1-201ENST00000225964 NEMFO60524 1076 aa15.07■□□□□ 0
COL1A1-201ENST00000225964 ADCY5O95622 1261 aa15.07■□□□□ 0
COL1A1-201ENST00000225964 CKAP4Q07065 602 aaKnown RBP15.06■□□□□ 0
COL1A1-201ENST00000225964 SPECC1LQ69YQ0 1117 aa15.06■□□□□ 0
COL1A1-201ENST00000225964 TNRQ92752 1358 aa15.06■□□□□ 0
COL1A1-201ENST00000225964 ARID5AQ03989 594 aa15.06■□□□□ 0
COL1A1-201ENST00000225964 Q6ZUG5 572 aa15.06■□□□□ 0
COL1A1-201ENST00000225964 MAGEB6Q8N7X4 407 aa15.06■□□□□ 0
COL1A1-201ENST00000225964 BRF1Q92994 677 aa15.06■□□□□ 0
COL1A1-201ENST00000225964 SELENOOQ9BVL4 669 aa15.06■□□□□ 0
COL1A1-201ENST00000225964 RASAL2Q9UJF2 1139 aa15.06■□□□□ 0
COL1A1-201ENST00000225964 MXRA7P84157 204 aa15.06■□□□□ 0
COL1A1-201ENST00000225964 SLC9C2Q5TAH2 1124 aa15.06■□□□□ 0
COL1A1-201ENST00000225964 ZSCAN16Q9H4T2 348 aaPredicted RBP15.06■□□□□ 0
COL1A1-201ENST00000225964 WDR7Q9Y4E6 1490 aa15.06■□□□□ 0
COL1A1-201ENST00000225964 KIAA0586Q9BVV6 1533 aa15.06■□□□□ 0
COL1A1-201ENST00000225964 MCMDC2Q4G0Z9 681 aa15.06■□□□□ 0
COL1A1-201ENST00000225964 UBASH3AP57075 661 aa15.05■□□□□ 0
COL1A1-201ENST00000225964 EHBP1Q8NDI1 1231 aa15.05■□□□□ 0
COL1A1-201ENST00000225964 ZMYND15Q9H091 742 aa15.05■□□□□ 0
COL1A1-201ENST00000225964 NSD2O96028 1365 aa15.05■□□□□ 0
COL1A1-201ENST00000225964 MIGA1Q8NAN2 632 aa15.05■□□□□ 0
COL1A1-201ENST00000225964 RHPN1Q8TCX5 695 aa15.05■□□□□ 0
COL1A1-201ENST00000225964 RBM17Q96I25 401 aaKnown RBP15.05■□□□□ 0
COL1A1-201ENST00000225964 RTL9Q8NET4 1388 aa15.05■□□□□ -0
COL1A1-201ENST00000225964 GOLGA6L9A6NEM1 432 aa15.05■□□□□ -0
COL1A1-201ENST00000225964 FBLN1P23142 703 aa15.05■□□□□ -0
COL1A1-201ENST00000225964 ZNF408Q9H9D4 720 aa15.05■□□□□ -0
COL1A1-201ENST00000225964 SCAF11Q99590 1463 aaKnown RBP15.05■□□□□ -0
COL1A1-201ENST00000225964 KRT2P35908 639 aa15.05■□□□□ -0
COL1A1-201ENST00000225964 FAM107BQ9H098 131 aa15.05■□□□□ -0
COL1A1-201ENST00000225964 MCM9Q9NXL9 1143 aa15.05■□□□□ -0
COL1A1-201ENST00000225964 PLB1Q6P1J6 1458 aa15.04■□□□□ -0
COL1A1-201ENST00000225964 TNNI2P48788 182 aa15.04■□□□□ -0
COL1A1-201ENST00000225964 BMP15O95972 392 aa15.04■□□□□ -0
COL1A1-201ENST00000225964 CTAGE1Q96RT6 745 aa15.04■□□□□ -0
COL1A1-201ENST00000225964 NSFL1CQ9UNZ2 370 aaKnown RBP15.04■□□□□ -0
COL1A1-201ENST00000225964 NPHP3Q7Z494 1330 aa15.04■□□□□ -0
COL1A1-201ENST00000225964 PTGS1P23219 599 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms