RNA–Protein interactions for RNA: ENST00000221784.8

PDCD5-201, Transcript of programmed cell death 5, humanhuman

TSL 3

Gene PDCD5, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD5-201ENST00000221784 ECE2O60344 883 aa17.7■□□□□ 0.42
PDCD5-201ENST00000221784 CWF19L2Q2TBE0 894 aaKnown RBP17.7■□□□□ 0.42
PDCD5-201ENST00000221784 DCAF8Q5TAQ9 597 aa17.7■□□□□ 0.42
PDCD5-201ENST00000221784 CST9Q5W186 159 aa17.7■□□□□ 0.42
PDCD5-201ENST00000221784 MICALL2Q8IY33 904 aa17.7■□□□□ 0.42
PDCD5-201ENST00000221784 TNS4Q8IZW8 715 aa17.7■□□□□ 0.42
PDCD5-201ENST00000221784 GGA1Q9UJY5 639 aa17.7■□□□□ 0.42
PDCD5-201ENST00000221784 DUOX1Q9NRD9 1551 aa17.7■□□□□ 0.42
PDCD5-201ENST00000221784 FANCIQ9NVI1 1328 aa17.7■□□□□ 0.42
PDCD5-201ENST00000221784 SHTN1A0MZ66 631 aa17.69■□□□□ 0.42
PDCD5-201ENST00000221784 NEURL1BA8MQ27 555 aa17.69■□□□□ 0.42
PDCD5-201ENST00000221784 UFL1O94874 794 aa17.69■□□□□ 0.42
PDCD5-201ENST00000221784 CTSWP56202 376 aa17.69■□□□□ 0.42
PDCD5-201ENST00000221784 TRPM4Q8TD43 1214 aa17.69■□□□□ 0.42
PDCD5-201ENST00000221784 AIDAQ96BJ3 306 aa17.69■□□□□ 0.42
PDCD5-201ENST00000221784 CDC5LQ99459 802 aaKnown RBP17.69■□□□□ 0.42
PDCD5-201ENST00000221784 GLIS2Q9BZE0 524 aaPredicted RBP17.69■□□□□ 0.42
PDCD5-201ENST00000221784 KCNQ5Q9NR82 932 aa17.69■□□□□ 0.42
PDCD5-201ENST00000221784 WDR33Q9C0J8 1336 aaKnown RBP17.69■□□□□ 0.42
PDCD5-201ENST00000221784 H7C1W4 665 aa17.68■□□□□ 0.42
PDCD5-201ENST00000221784 FOXN1O15353 648 aa17.68■□□□□ 0.42
PDCD5-201ENST00000221784 VAMP4O75379 141 aa17.68■□□□□ 0.42
PDCD5-201ENST00000221784 TAF1P21675 1872 aa17.68■□□□□ 0.42
PDCD5-201ENST00000221784 RPS12P25398 132 aaKnown RBP17.68■□□□□ 0.42
PDCD5-201ENST00000221784 FLIIQ13045 1269 aa17.68■□□□□ 0.42
PDCD5-201ENST00000221784 CDC37L1Q7L3B6 337 aa17.68■□□□□ 0.42
PDCD5-201ENST00000221784 TTLL11Q8NHH1 800 aa17.68■□□□□ 0.42
PDCD5-201ENST00000221784 FKBP5Q13451 457 aaPredicted RBP17.67■□□□□ 0.42
PDCD5-201ENST00000221784 SAMD7Q7Z3H4 446 aa17.67■□□□□ 0.42
PDCD5-201ENST00000221784 WBP1LQ9NX94 342 aa17.67■□□□□ 0.42
PDCD5-201ENST00000221784 COL4A1P02462 1669 aa17.67■□□□□ 0.42
PDCD5-201ENST00000221784 XDHP47989 1333 aa17.67■□□□□ 0.42
PDCD5-201ENST00000221784 CELF2O95319 508 aaKnown RBP17.66■□□□□ 0.42
PDCD5-201ENST00000221784 VIL1P09327 827 aaKnown RBP17.66■□□□□ 0.42
PDCD5-201ENST00000221784 ATP2B4P23634 1241 aa17.66■□□□□ 0.42
PDCD5-201ENST00000221784 ECE1P42892 770 aa17.66■□□□□ 0.42
PDCD5-201ENST00000221784 EXOSC9Q06265 439 aaKnown RBP17.66■□□□□ 0.42
PDCD5-201ENST00000221784 GCKRQ14397 625 aa17.66■□□□□ 0.42
PDCD5-201ENST00000221784 TBC1D10BQ4KMP7 808 aaPredicted RBP17.66■□□□□ 0.42
PDCD5-201ENST00000221784 PAXIP1Q6ZW49 1069 aaPredicted RBP17.66■□□□□ 0.42
PDCD5-201ENST00000221784 UBE3BQ7Z3V4 1068 aa17.66■□□□□ 0.42
PDCD5-201ENST00000221784 FAM9BQ8IZU0 186 aa17.66■□□□□ 0.42
PDCD5-201ENST00000221784 DNAAF4Q8WXU2 420 aa17.66■□□□□ 0.42
PDCD5-201ENST00000221784 GREM2Q9H772 168 aa17.66■□□□□ 0.42
PDCD5-201ENST00000221784 BSDC1Q9NW68 430 aaPredicted RBP17.66■□□□□ 0.42
PDCD5-201ENST00000221784 TLL2Q9Y6L7 1015 aa17.66■□□□□ 0.42
PDCD5-201ENST00000221784 LRRC37AA6NMS7 1700 aa17.66■□□□□ 0.42
PDCD5-201ENST00000221784 RTL9Q8NET4 1388 aa17.66■□□□□ 0.42
PDCD5-201ENST00000221784 CTCFP49711 727 aaPredicted RBP17.65■□□□□ 0.42
PDCD5-201ENST00000221784 MAP2K1Q02750 393 aaPredicted RBP17.65■□□□□ 0.42
PDCD5-201ENST00000221784 RBM26Q5T8P6 1007 aaKnown RBP17.65■□□□□ 0.42
PDCD5-201ENST00000221784 CAPNS2Q96L46 248 aa17.65■□□□□ 0.42
PDCD5-201ENST00000221784 MYH16Q9H6N6 1097 aa17.65■□□□□ 0.42
PDCD5-201ENST00000221784 CYP4F22Q6NT55 531 aa17.64■□□□□ 0.41
PDCD5-201ENST00000221784 USP48Q86UV5 1035 aa17.64■□□□□ 0.41
PDCD5-201ENST00000221784 LINS1Q8NG48 757 aa17.64■□□□□ 0.41
PDCD5-201ENST00000221784 MINPP1Q9UNW1 487 aa17.64■□□□□ 0.41
PDCD5-201ENST00000221784 GRM1Q13255 1194 aa17.63■□□□□ 0.41
PDCD5-201ENST00000221784 SAPCD2Q86UD0 394 aa17.63■□□□□ 0.41
PDCD5-201ENST00000221784 PLA2G12BQ9BX93 195 aa17.63■□□□□ 0.41
PDCD5-201ENST00000221784 ZNF408Q9H9D4 720 aa17.63■□□□□ 0.41
PDCD5-201ENST00000221784 SPINK5Q9NQ38 1064 aaPredicted RBP17.63■□□□□ 0.41
PDCD5-201ENST00000221784 PRDM10Q9NQV6 1147 aa17.63■□□□□ 0.41
PDCD5-201ENST00000221784 EGFRP00533 1210 aa17.62■□□□□ 0.41
PDCD5-201ENST00000221784 IGHMBP2P38935 993 aaKnown RBP17.62■□□□□ 0.41
PDCD5-201ENST00000221784 PODNQ7Z5L7 613 aa17.62■□□□□ 0.41
PDCD5-201ENST00000221784 DCPSQ96C86 337 aaKnown RBP17.62■□□□□ 0.41
PDCD5-201ENST00000221784 WTIPA6NIX2 430 aaPredicted RBP17.61■□□□□ 0.41
PDCD5-201ENST00000221784 CSF1RP07333 972 aa17.61■□□□□ 0.41
PDCD5-201ENST00000221784 CASP7P55210 303 aa17.61■□□□□ 0.41
PDCD5-201ENST00000221784 RSBN1LQ6PCB5 846 aaPredicted RBP17.61■□□□□ 0.41
PDCD5-201ENST00000221784 KRT26Q7Z3Y9 468 aa17.61■□□□□ 0.41
PDCD5-201ENST00000221784 AGBL3Q8NEM8 1001 aa17.61■□□□□ 0.41
PDCD5-201ENST00000221784 HHIPL1Q96JK4 782 aa17.61■□□□□ 0.41
PDCD5-201ENST00000221784 CAPN15O75808 1086 aa17.6■□□□□ 0.41
PDCD5-201ENST00000221784 ITGA6P23229 1130 aa17.6■□□□□ 0.41
PDCD5-201ENST00000221784 CCT4P50991 539 aaKnown RBP17.6■□□□□ 0.41
PDCD5-201ENST00000221784 LBX1P52954 281 aa17.6■□□□□ 0.41
PDCD5-201ENST00000221784 KIF4BQ2VIQ3 1234 aa17.6■□□□□ 0.41
PDCD5-201ENST00000221784 LEMD3Q9Y2U8 911 aa17.6■□□□□ 0.41
PDCD5-201ENST00000221784 USP17L3A6NCW0 530 aa17.59■□□□□ 0.41
PDCD5-201ENST00000221784 USP17L4A6NCW7 530 aa17.59■□□□□ 0.41
PDCD5-201ENST00000221784 MAP2K2P36507 400 aa17.59■□□□□ 0.41
PDCD5-201ENST00000221784 ZNF280AP59817 542 aaPredicted RBP17.59■□□□□ 0.41
PDCD5-201ENST00000221784 DLK2Q6UY11 383 aa17.59■□□□□ 0.41
PDCD5-201ENST00000221784 USP17L1Q7RTZ2 530 aa17.59■□□□□ 0.41
PDCD5-201ENST00000221784 MPHOSPH8Q99549 860 aa17.59■□□□□ 0.41
PDCD5-201ENST00000221784 BEGAINQ9BUH8 593 aa17.59■□□□□ 0.41
PDCD5-201ENST00000221784 F6X3S4 739 aa17.58■□□□□ 0.4
PDCD5-201ENST00000221784 FAM161AQ3B820 660 aa17.58■□□□□ 0.4
PDCD5-201ENST00000221784 BEND3Q5T5X7 828 aa17.58■□□□□ 0.4
PDCD5-201ENST00000221784 ANKRD2Q9GZV1 360 aa17.58■□□□□ 0.4
PDCD5-201ENST00000221784 MED23Q9ULK4 1368 aa17.57■□□□□ 0.4
PDCD5-201ENST00000221784 AOC2O75106 756 aa17.57■□□□□ 0.4
PDCD5-201ENST00000221784 USP17L8P0C7I0 530 aa17.57■□□□□ 0.4
PDCD5-201ENST00000221784 HSPA8P11142 646 aaKnown RBP17.57■□□□□ 0.4
PDCD5-201ENST00000221784 SULF1Q8IWU6 871 aa17.57■□□□□ 0.4
PDCD5-201ENST00000221784 GMLQ99445 158 aa17.57■□□□□ 0.4
PDCD5-201ENST00000221784 COA1Q9GZY4 146 aa17.57■□□□□ 0.4
PDCD5-201ENST00000221784 ANKRD18BA2A2Z9 1011 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms